FFCP PHASE1:Mm9::chr11:69373672..69373687,-: Difference between revisions
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{{FFCP|EntrezGene=13643|HGNC=|UniProt=O35393|association_with_transcript=19bp_to_ENSMUST00000004036_5end|description=CAGE_peak_1_at_Efnb3_5end|id=chr11:69373672..69373687,-|ontology_enrichment_celltype=CL:0000117!1.82e-13!23;CL:0000337!1.82e-13!23;CL:0000540!1.56e-10!33;CL:0000047!1.56e-10!33;CL:0000031!1.56e-10!33;CL:0000404!1.56e-10!33;CL:0002319!1.23e-08!43;CL:0000221!1.39e-08!44;CL:0000133!1.39e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,3.05e-14,23;CL:0000337,3.05e-14,23;CL:0000540,1.20e-09,33;CL:0000047,1.20e-09,33;CL:0000031,1.20e-09,33;CL:0000404,1.20e-09,33;CL:0002319,1.79e-07,43;CL:0000221,1.94e-07,44;CL:0000133,1.94e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.22e-23!73;UBERON:0005743!2.22e-23!73;UBERON:0000073!1.20e-21!75;UBERON:0001016!1.20e-21!75;UBERON:0002346!9.70e-21!71;UBERON:0003075!9.70e-21!71;UBERON:0007284!9.70e-21!71;UBERON:0001049!1.19e-20!52;UBERON:0005068!1.19e-20!52;UBERON:0006241!1.19e-20!52;UBERON:0007135!1.19e-20!52;UBERON:0000033!1.60e-20!63;UBERON:0000955!2.79e-19!50;UBERON:0006238!2.79e-19!50;UBERON:0002616!1.17e-18!49;UBERON:0004121!1.38e-18!102;UBERON:0000924!1.38e-18!102;UBERON:0006601!1.38e-18!102;UBERON:0003056!4.43e-17!49;UBERON:0003080!9.59e-15!40;UBERON:0002780!4.04e-14!39;UBERON:0001890!4.04e-14!39;UBERON:0006240!4.04e-14!39;UBERON:0002020!2.83e-13!34;UBERON:0002791!1.93e-10!29;UBERON:0003528!1.93e-10!29;UBERON:0001893!1.93e-10!29;UBERON:0000153!1.31e-09!94;UBERON:0000025!2.13e-09!114;UBERON:0004111!2.18e-08!122;UBERON:0007811!2.83e-08!86;UBERON:0000468!1.10e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.40e-27,92;UBERON:0002346,3.47e-22,64;UBERON:0003075,3.47e-22,64;UBERON:0007284,3.47e-22,64;UBERON:0001017,8.32e-22,73;UBERON:0000073,1.32e-21,54;UBERON:0001049,2.05e-20,52;UBERON:0005068,2.05e-20,52;UBERON:0006241,2.05e-20,52;UBERON:0007135,2.05e-20,52;UBERON:0001016,2.33e-20,75;UBERON:0010371,9.90e-19,73;UBERON:0004121,2.68e-18,95;UBERON:0000924,2.68e-18,95;UBERON:0006601,2.68e-18,95;UBERON:0000955,4.49e-17,47;UBERON:0006238,4.49e-17,47;UBERON:0003056,5.67e-17,49;UBERON:0002616,1.93e-16,46;UBERON:0003080,1.76e-14,40;UBERON:0002780,7.89e-14,39;UBERON:0001890,7.89e-14,39;UBERON:0006240,7.89e-14,39;UBERON:0002020,2.58e-13,34;UBERON:0003528,2.42e-10,29;UBERON:0002791,2.42e-10,29;UBERON:0001893,2.42e-10,29;UBERON:0000025,7.21e-09,114;UBERON:0004111,1.30e-07,122;UBERON:0002420,5.07e-07,8;UBERON:0007245,5.07e-07,8;UBERON:0010009,5.07e-07,8;UBERON:0010011,5.07e-07,8;UBERON:0000454,5.07e-07,8;UBERON:0003076,9.37e-07,12;UBERON:0003057,9.37e-07,12|phase1_expression=11.69086583865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,9.0145887560134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.342174953049,0.218025156380447,0.439372365468944,0.388859798148567,3.49966054063406,7.18762821824858,0,0,0,0,0,0,63.3250522490541,57.6600167406516,47.5373552629634,1.69422266034566,1.77858959222228,0,0,0,3.59520132622086,7.68436610643109,9.85051316930538,12.0155285115205,10.0955981448663,41.1337417541477,36.001572175113,18.1286382838132,15.7186572469908,9.19218786610021,34.1359231098105,45.9674417106676,44.5458946443106,78.208568624005,85.9983849862651,76.0533521012869,46.902743832232,37.1423322620909,57.4521411640806,37.7124589406295,41.0030440701416,47.3454592396263,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,2.81686839553361,0,0,0,0,0,0,1.59857431606684,0,0,5.89850111004862,3.34912026143355,2.99800146432876,3.01445281105245,3.05730638552832,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,17.2740670236813,16.3368431314495,0.510914110417183,0.11981512450592,0,0,47.333842051924,56.2725741466911,46.366455929647,26.0736480288415,19.4343747571051,58.3884405212364,44.7785886067011,6.41587992256993,0.373220911830279,0.252722758433675,5.05060454127538,18.9975846725547,10.8053989083732,11.884100567153,6.32960234910003,12.5867523429957,12.9394857487698,10.6819965998091,6.72628763921441,18.3232793992916,17.5868654556072,18.8267702855425,14.0285268753648,12.2340789659263,5.57203466435466,3.70407845534298,8.16040493955822,0,0,0,39.9752740993519,34.24080475724,32.4111710629827,33.6177524530999,36.2046186415223,29.4650185614892,28.6016752043002,23.3397859217669,33.6284186017448,55.2921095709294,30.8634832468699,23.7531611969357,23.8305979503292,19.1008600303214,22.2782655142217,45.8432087869797,62.5660043266049,0,0,9.38468302355029,5.80591679651096,3.73715637834071,3.02525286935014,3.7804267453628,3.61428689613862,0.949058123089023,4.11747386810027,2.01068167040216,2.38747766449381,2.53453313254856,0.898819408654221,0.216138049874694,0.597423819763102,6.2590407314517,4.34144347916969,2.25415471346161,1.83286195060783,3.29719228184964,2.66516115583211,1.13825766823663,0.147610147979602,0,0.123397163921801,0,2.33583148002532,0.786235980452812,1.12431056192427,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0,0,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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:13643 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O35393 | |||
|association_with_transcript=19bp_to_ENSMUST00000004036_5end | |||
|cluster_id=chr11:69373672..69373687,- | |||
|description=CAGE_peak_1_at_Efnb3_5end | |||
|id=chr11:69373672..69373687,- | |||
|ontology_enrichment_celltype=CL:0000117!1.82e-13!23;CL:0000337!1.82e-13!23;CL:0000540!1.56e-10!33;CL:0000047!1.56e-10!33;CL:0000031!1.56e-10!33;CL:0000404!1.56e-10!33;CL:0002319!1.23e-08!43;CL:0000221!1.39e-08!44;CL:0000133!1.39e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.05e-14,23;CL:0000337,3.05e-14,23;CL:0000540,1.20e-09,33;CL:0000047,1.20e-09,33;CL:0000031,1.20e-09,33;CL:0000404,1.20e-09,33;CL:0002319,1.79e-07,43;CL:0000221,1.94e-07,44;CL:0000133,1.94e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.22e-23!73;UBERON:0005743!2.22e-23!73;UBERON:0000073!1.20e-21!75;UBERON:0001016!1.20e-21!75;UBERON:0002346!9.70e-21!71;UBERON:0003075!9.70e-21!71;UBERON:0007284!9.70e-21!71;UBERON:0001049!1.19e-20!52;UBERON:0005068!1.19e-20!52;UBERON:0006241!1.19e-20!52;UBERON:0007135!1.19e-20!52;UBERON:0000033!1.60e-20!63;UBERON:0000955!2.79e-19!50;UBERON:0006238!2.79e-19!50;UBERON:0002616!1.17e-18!49;UBERON:0004121!1.38e-18!102;UBERON:0000924!1.38e-18!102;UBERON:0006601!1.38e-18!102;UBERON:0003056!4.43e-17!49;UBERON:0003080!9.59e-15!40;UBERON:0002780!4.04e-14!39;UBERON:0001890!4.04e-14!39;UBERON:0006240!4.04e-14!39;UBERON:0002020!2.83e-13!34;UBERON:0002791!1.93e-10!29;UBERON:0003528!1.93e-10!29;UBERON:0001893!1.93e-10!29;UBERON:0000153!1.31e-09!94;UBERON:0000025!2.13e-09!114;UBERON:0004111!2.18e-08!122;UBERON:0007811!2.83e-08!86;UBERON:0000468!1.10e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,4.40e-27,92;UBERON:0002346,3.47e-22,64;UBERON:0003075,3.47e-22,64;UBERON:0007284,3.47e-22,64;UBERON:0001017,8.32e-22,73;UBERON:0000073,1.32e-21,54;UBERON:0001049,2.05e-20,52;UBERON:0005068,2.05e-20,52;UBERON:0006241,2.05e-20,52;UBERON:0007135,2.05e-20,52;UBERON:0001016,2.33e-20,75;UBERON:0010371,9.90e-19,73;UBERON:0004121,2.68e-18,95;UBERON:0000924,2.68e-18,95;UBERON:0006601,2.68e-18,95;UBERON:0000955,4.49e-17,47;UBERON:0006238,4.49e-17,47;UBERON:0003056,5.67e-17,49;UBERON:0002616,1.93e-16,46;UBERON:0003080,1.76e-14,40;UBERON:0002780,7.89e-14,39;UBERON:0001890,7.89e-14,39;UBERON:0006240,7.89e-14,39;UBERON:0002020,2.58e-13,34;UBERON:0003528,2.42e-10,29;UBERON:0002791,2.42e-10,29;UBERON:0001893,2.42e-10,29;UBERON:0000025,7.21e-09,114;UBERON:0004111,1.30e-07,122;UBERON:0002420,5.07e-07,8;UBERON:0007245,5.07e-07,8;UBERON:0010009,5.07e-07,8;UBERON:0010011,5.07e-07,8;UBERON:0000454,5.07e-07,8;UBERON:0003076,9.37e-07,12;UBERON:0003057,9.37e-07,12 | |||
|phase1_expression=11.69086583865,0,0,0,0,0,0,0,0,0,0,0,0,0,0.333109761815663,0,0,0,0,0,9.0145887560134,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,20.342174953049,0.218025156380447,0.439372365468944,0.388859798148567,3.49966054063406,7.18762821824858,0,0,0,0,0,0,63.3250522490541,57.6600167406516,47.5373552629634,1.69422266034566,1.77858959222228,0,0,0,3.59520132622086,7.68436610643109,9.85051316930538,12.0155285115205,10.0955981448663,41.1337417541477,36.001572175113,18.1286382838132,15.7186572469908,9.19218786610021,34.1359231098105,45.9674417106676,44.5458946443106,78.208568624005,85.9983849862651,76.0533521012869,46.902743832232,37.1423322620909,57.4521411640806,37.7124589406295,41.0030440701416,47.3454592396263,0,0,0,0,0,0,0,0,2.66844398250329,0,0,0,2.81686839553361,0,0,0,0,0,0,1.59857431606684,0,0,5.89850111004862,3.34912026143355,2.99800146432876,3.01445281105245,3.05730638552832,0.502666365318702,0,0.144599356919912,0,0.323533699894818,0.441683036920787,0.484875253135222,0,17.2740670236813,16.3368431314495,0.510914110417183,0.11981512450592,0,0,47.333842051924,56.2725741466911,46.366455929647,26.0736480288415,19.4343747571051,58.3884405212364,44.7785886067011,6.41587992256993,0.373220911830279,0.252722758433675,5.05060454127538,18.9975846725547,10.8053989083732,11.884100567153,6.32960234910003,12.5867523429957,12.9394857487698,10.6819965998091,6.72628763921441,18.3232793992916,17.5868654556072,18.8267702855425,14.0285268753648,12.2340789659263,5.57203466435466,3.70407845534298,8.16040493955822,0,0,0,39.9752740993519,34.24080475724,32.4111710629827,33.6177524530999,36.2046186415223,29.4650185614892,28.6016752043002,23.3397859217669,33.6284186017448,55.2921095709294,30.8634832468699,23.7531611969357,23.8305979503292,19.1008600303214,22.2782655142217,45.8432087869797,62.5660043266049,0,0,9.38468302355029,5.80591679651096,3.73715637834071,3.02525286935014,3.7804267453628,3.61428689613862,0.949058123089023,4.11747386810027,2.01068167040216,2.38747766449381,2.53453313254856,0.898819408654221,0.216138049874694,0.597423819763102,6.2590407314517,4.34144347916969,2.25415471346161,1.83286195060783,3.29719228184964,2.66516115583211,1.13825766823663,0.147610147979602,0,0.123397163921801,0,2.33583148002532,0.786235980452812,1.12431056192427,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,1.43768206527355,0,0,0.252578877947112,0,0,0,8.14813070613084,5.21487924614483,1.86719594352707,0.704070744865506,1.67506257441816,2.14239276797412,0.390267295715598,0.315270288212382,0.44292937929755,1.43509291791738,0,0,0,0,0,0,0,65.0229889450557,67.7483548502934,0,0.252470927204373,1.26203287766503,1.17131623288992,1.72338718186239,0.716906393857656,0.445597348164788,0.566153061577665,0.809621403349789,4.38383786866968,4.74345333535828,43.378377716944,1.70328102249922,12.8207234640424,16.4515828947112,4.45419332025846,0,7.52619972080442,2.41858845571801,1.32023555829129,2.36241514304618,1.53717573971964,2.32585463851399,1.09060118843252,1.42598951353889,0.948110273807448,0,0,0.680879211507576,16.9257428389432,18.7570091484994,19.2903331528433,13.3005175231705,24.6148968290857,15.6321569572015,16.4411072521884,0.23467170806371,0,0.441056796109924,0,1.29171541356724,1.26657142349127,1.43246812803764,0.328281799490123,0,113.109434226411,0,6.3979929068599,1.66675074632741,0.376736914009382,0,0,0,0,0,0,10.4390877881775,5.28630614529807,3.02414954301044,2.50905955217362,2.40198820120795,2.15782954215713,1.32245529160537,0.26175594198403,0.259229946583586,0,0,4.03694674318743,3.30916980914195,4.86127970860119,5.03723311563151,5.06868376472335,5.75050469364194,2.99470085141085,3.04092098834561,0.724752362478018,0.288030006257865,0,2.22997736819181,0.924398614483445,0.25984164595559,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,3.29672923681077,0,1.00314420807073,14.6835479080437,10.1271552031579,9.73922372846974,8.93636548187176,8.90607275701835,10.5755145634558,3.37511250115903,9.90706647093285,8.60970577069989,7.24864436452548,8.19920045914996,18.3551441764474,18.4392294214465,10.6966955510049,5.44994222832754,8.27295788025063,10.0011027510727,9.06554251851134,7.06022261101994,5.81203587056734,10.1391719956096,6.22466926574051,6.27398100048212,10.2440243847791,9.82146519140987,10.9547548995107,9.03897742369873,10.9958255664312,6.59337441285291,7.21274708658547,3.42869252385415,7.80893547101085,9.29901140794552,5.95920308192547,7.34053167239579,6.68455402344244,8.96347067076586,7.3659519202596,9.77789619690205,6.73370725989286,6.52492599682958,7.2893316957917,7.36615877705441,8.36658942404216,8.10207766120794,21.2338991247254,7.25187986180766,5.15690529715916,3.63447830930802,2.42650561031467,1.85494268496337 | |||
|short_description=p1@Efnb3 | |||
}} |
Revision as of 10:08, 6 August 2015
Short description: | p1@Efnb3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Efnb3_5end |
Coexpression cluster: | NA |
Association with transcript: | 19bp_to_ENSMUST00000004036_5end |
EntrezGene: | 13643 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.05e-14 | 23 |
neuroblast (sensu Vertebrata) | 3.05e-14 | 23 |
neuron | 1.20e-09 | 33 |
neuronal stem cell | 1.20e-09 | 33 |
neuroblast | 1.20e-09 | 33 |
electrically signaling cell | 1.20e-09 | 33 |
neural cell | 1.79e-07 | 43 |
ectodermal cell | 1.94e-07 | 44 |
neurectodermal cell | 1.94e-07 | 44 |