FFCP PHASE1:Mm9::chrX:7218219..7218235,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=666|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:7218219..7218235,+|id=chrX:7218219..7218235,+|ontology_enrichment_celltype=CL:0000117!3.58e-18!23;CL:0000337!3.58e-18!23;CL:0000540!9.00e-16!33;CL:0000047!9.00e-16!33;CL:0000031!9.00e-16!33;CL:0000404!9.00e-16!33;CL:0002319!2.20e-12!43;CL:0000393!3.80e-12!39;CL:0000211!3.80e-12!39;CL:0000221!6.43e-12!44;CL:0000133!6.43e-12!44;CL:0000055!1.53e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,8.65e-22,23;CL:0000337,8.65e-22,23;CL:0000540,4.00e-14,33;CL:0000047,4.00e-14,33;CL:0000031,4.00e-14,33;CL:0000404,4.00e-14,33;CL:0000393,2.01e-11,39;CL:0000211,2.01e-11,39;CL:0002319,4.81e-10,43;CL:0000221,9.70e-10,44;CL:0000133,9.70e-10,44;CL:0002614,3.36e-09,3;CL:0002610,6.48e-09,3;CL:0002612,7.56e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.07e-34!73;UBERON:0005743!1.07e-34!73;UBERON:0000073!2.58e-33!75;UBERON:0001016!2.58e-33!75;UBERON:0004121!2.40e-32!102;UBERON:0000924!2.40e-32!102;UBERON:0006601!2.40e-32!102;UBERON:0002346!1.52e-31!71;UBERON:0003075!1.52e-31!71;UBERON:0007284!1.52e-31!71;UBERON:0001049!1.49e-29!52;UBERON:0005068!1.49e-29!52;UBERON:0006241!1.49e-29!52;UBERON:0007135!1.49e-29!52;UBERON:0000955!9.35e-28!50;UBERON:0006238!9.35e-28!50;UBERON:0000033!4.92e-27!63;UBERON:0002616!9.78e-27!49;UBERON:0002020!3.18e-25!34;UBERON:0003056!2.15e-21!49;UBERON:0002791!9.65e-20!29;UBERON:0003528!9.65e-20!29;UBERON:0001893!9.65e-20!29;UBERON:0003080!2.24e-19!40;UBERON:0002780!1.75e-18!39;UBERON:0001890!1.75e-18!39;UBERON:0006240!1.75e-18!39;UBERON:0007811!7.65e-17!86;UBERON:0000153!3.13e-14!94;UBERON:0000956!6.37e-14!21;UBERON:0001869!6.37e-14!21;UBERON:0000203!6.37e-14!21;UBERON:0002021!2.73e-13!10;UBERON:0000411!2.73e-13!10;UBERON:0001950!2.73e-13!10;UBERON:0002619!2.40e-12!17;UBERON:0003076!6.86e-11!12;UBERON:0003057!6.86e-11!12;UBERON:0002298!3.97e-08!6;UBERON:0002240!1.07e-07!6;UBERON:0005174!1.07e-07!6;UBERON:0001137!1.07e-07!6;UBERON:0002420!5.07e-07!8;UBERON:0007245!5.07e-07!8;UBERON:0010009!5.07e-07!8;UBERON:0010011!5.07e-07!8;UBERON:0000454!5.07e-07!8;UBERON:0001948!7.16e-07!5;UBERON:0002315!7.16e-07!5;UBERON:0000025!9.80e-07!114|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.09e-42,54;UBERON:0001017,7.26e-36,73;UBERON:0001016,1.00e-34,75;UBERON:0001049,1.33e-34,52;UBERON:0005068,1.33e-34,52;UBERON:0006241,1.33e-34,52;UBERON:0007135,1.33e-34,52;UBERON:0002020,8.35e-32,34;UBERON:0002346,6.22e-29,64;UBERON:0003075,6.22e-29,64;UBERON:0007284,6.22e-29,64;UBERON:0000955,7.64e-28,47;UBERON:0006238,7.64e-28,47;UBERON:0004121,1.16e-27,95;UBERON:0000924,1.16e-27,95;UBERON:0006601,1.16e-27,95;UBERON:0002616,3.48e-26,46;UBERON:0002021,3.83e-25,10;UBERON:0000411,3.83e-25,10;UBERON:0001950,3.83e-25,10;UBERON:0010371,1.45e-24,73;UBERON:0003528,3.83e-22,29;UBERON:0002791,3.83e-22,29;UBERON:0001893,3.83e-22,29;UBERON:0003080,4.90e-21,40;UBERON:0002780,1.46e-19,39;UBERON:0001890,1.46e-19,39;UBERON:0006240,1.46e-19,39;UBERON:0010314,3.81e-18,92;UBERON:0003056,4.96e-18,49;UBERON:0000956,5.10e-18,21;UBERON:0001869,5.10e-18,21;UBERON:0000203,5.10e-18,21;UBERON:0002619,9.91e-17,17;UBERON:0003076,1.18e-14,12;UBERON:0003057,1.18e-14,12;UBERON:0000025,2.64e-12,114;UBERON:0001948,3.04e-12,5;UBERON:0002315,3.04e-12,5;UBERON:0004111,4.45e-11,122;UBERON:0002950,6.26e-11,4;UBERON:0001891,6.26e-11,4;UBERON:0009616,6.26e-11,4;UBERON:0010286,6.26e-11,4;UBERON:0002240,3.78e-10,6;UBERON:0005174,3.78e-10,6;UBERON:0001137,3.78e-10,6;UBERON:0002038,3.36e-09,3;UBERON:0009663,3.36e-09,3;UBERON:0009661,3.36e-09,3;UBERON:0000125,3.36e-09,3;UBERON:0002308,3.36e-09,3;UBERON:0011216,4.38e-09,194;UBERON:0004684,6.48e-09,3;UBERON:0002275,6.48e-09,3;UBERON:0002257,7.56e-08,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,3.1739458756322,1.90149421051854,0,0,0.449949858640699,0,0,0,0.384218305321555,0.311068836925433,1.62007125998029,0,3.71346279724945,5.07997644188711,0,0.191690942036473,0.919218786610021,19.82085857989,7.2781782708557,6.29786786350598,0.395658863190582,1.09785172322892,0,10.0505879640497,10.6924895906019,7.94550888439413,3.24091444021034,6.26435395516053,1.1183966749518,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,1.75668478206928,1.8850203613211,0,0,0,0,1.04853447583376,0.457500602818626,0.376963056338593,1.04294592115366,1.53429274398198,4.98691306942944,1.1356888414743,0,0,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.72936002979246,1.05490517932983,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0.21183207086382,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,9.66682996665071,7.44764167471216,7.56154002312225,8.90607275701835,9.06472676867641,5.40018000185445,7.20513925158753,3.62513927187364,3.62432218226274,0,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0,0,0.50695859978048,0,0.468207537349412,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.499621155875892,0,0,0.191288332068843,0,0|short_description=p@chrX:7218219..7218235,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=666 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:7218219..7218235,+ | |||
|description=CAGE_peak_at_chrX:7218219..7218235,+ | |||
|id=chrX:7218219..7218235,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.58e-18!23;CL:0000337!3.58e-18!23;CL:0000540!9.00e-16!33;CL:0000047!9.00e-16!33;CL:0000031!9.00e-16!33;CL:0000404!9.00e-16!33;CL:0002319!2.20e-12!43;CL:0000393!3.80e-12!39;CL:0000211!3.80e-12!39;CL:0000221!6.43e-12!44;CL:0000133!6.43e-12!44;CL:0000055!1.53e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.65e-22,23;CL:0000337,8.65e-22,23;CL:0000540,4.00e-14,33;CL:0000047,4.00e-14,33;CL:0000031,4.00e-14,33;CL:0000404,4.00e-14,33;CL:0000393,2.01e-11,39;CL:0000211,2.01e-11,39;CL:0002319,4.81e-10,43;CL:0000221,9.70e-10,44;CL:0000133,9.70e-10,44;CL:0002614,3.36e-09,3;CL:0002610,6.48e-09,3;CL:0002612,7.56e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.07e-34!73;UBERON:0005743!1.07e-34!73;UBERON:0000073!2.58e-33!75;UBERON:0001016!2.58e-33!75;UBERON:0004121!2.40e-32!102;UBERON:0000924!2.40e-32!102;UBERON:0006601!2.40e-32!102;UBERON:0002346!1.52e-31!71;UBERON:0003075!1.52e-31!71;UBERON:0007284!1.52e-31!71;UBERON:0001049!1.49e-29!52;UBERON:0005068!1.49e-29!52;UBERON:0006241!1.49e-29!52;UBERON:0007135!1.49e-29!52;UBERON:0000955!9.35e-28!50;UBERON:0006238!9.35e-28!50;UBERON:0000033!4.92e-27!63;UBERON:0002616!9.78e-27!49;UBERON:0002020!3.18e-25!34;UBERON:0003056!2.15e-21!49;UBERON:0002791!9.65e-20!29;UBERON:0003528!9.65e-20!29;UBERON:0001893!9.65e-20!29;UBERON:0003080!2.24e-19!40;UBERON:0002780!1.75e-18!39;UBERON:0001890!1.75e-18!39;UBERON:0006240!1.75e-18!39;UBERON:0007811!7.65e-17!86;UBERON:0000153!3.13e-14!94;UBERON:0000956!6.37e-14!21;UBERON:0001869!6.37e-14!21;UBERON:0000203!6.37e-14!21;UBERON:0002021!2.73e-13!10;UBERON:0000411!2.73e-13!10;UBERON:0001950!2.73e-13!10;UBERON:0002619!2.40e-12!17;UBERON:0003076!6.86e-11!12;UBERON:0003057!6.86e-11!12;UBERON:0002298!3.97e-08!6;UBERON:0002240!1.07e-07!6;UBERON:0005174!1.07e-07!6;UBERON:0001137!1.07e-07!6;UBERON:0002420!5.07e-07!8;UBERON:0007245!5.07e-07!8;UBERON:0010009!5.07e-07!8;UBERON:0010011!5.07e-07!8;UBERON:0000454!5.07e-07!8;UBERON:0001948!7.16e-07!5;UBERON:0002315!7.16e-07!5;UBERON:0000025!9.80e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,7.09e-42,54;UBERON:0001017,7.26e-36,73;UBERON:0001016,1.00e-34,75;UBERON:0001049,1.33e-34,52;UBERON:0005068,1.33e-34,52;UBERON:0006241,1.33e-34,52;UBERON:0007135,1.33e-34,52;UBERON:0002020,8.35e-32,34;UBERON:0002346,6.22e-29,64;UBERON:0003075,6.22e-29,64;UBERON:0007284,6.22e-29,64;UBERON:0000955,7.64e-28,47;UBERON:0006238,7.64e-28,47;UBERON:0004121,1.16e-27,95;UBERON:0000924,1.16e-27,95;UBERON:0006601,1.16e-27,95;UBERON:0002616,3.48e-26,46;UBERON:0002021,3.83e-25,10;UBERON:0000411,3.83e-25,10;UBERON:0001950,3.83e-25,10;UBERON:0010371,1.45e-24,73;UBERON:0003528,3.83e-22,29;UBERON:0002791,3.83e-22,29;UBERON:0001893,3.83e-22,29;UBERON:0003080,4.90e-21,40;UBERON:0002780,1.46e-19,39;UBERON:0001890,1.46e-19,39;UBERON:0006240,1.46e-19,39;UBERON:0010314,3.81e-18,92;UBERON:0003056,4.96e-18,49;UBERON:0000956,5.10e-18,21;UBERON:0001869,5.10e-18,21;UBERON:0000203,5.10e-18,21;UBERON:0002619,9.91e-17,17;UBERON:0003076,1.18e-14,12;UBERON:0003057,1.18e-14,12;UBERON:0000025,2.64e-12,114;UBERON:0001948,3.04e-12,5;UBERON:0002315,3.04e-12,5;UBERON:0004111,4.45e-11,122;UBERON:0002950,6.26e-11,4;UBERON:0001891,6.26e-11,4;UBERON:0009616,6.26e-11,4;UBERON:0010286,6.26e-11,4;UBERON:0002240,3.78e-10,6;UBERON:0005174,3.78e-10,6;UBERON:0001137,3.78e-10,6;UBERON:0002038,3.36e-09,3;UBERON:0009663,3.36e-09,3;UBERON:0009661,3.36e-09,3;UBERON:0000125,3.36e-09,3;UBERON:0002308,3.36e-09,3;UBERON:0011216,4.38e-09,194;UBERON:0004684,6.48e-09,3;UBERON:0002275,6.48e-09,3;UBERON:0002257,7.56e-08,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,0.809265843438391,3.1739458756322,1.90149421051854,0,0,0.449949858640699,0,0,0,0.384218305321555,0.311068836925433,1.62007125998029,0,3.71346279724945,5.07997644188711,0,0.191690942036473,0.919218786610021,19.82085857989,7.2781782708557,6.29786786350598,0.395658863190582,1.09785172322892,0,10.0505879640497,10.6924895906019,7.94550888439413,3.24091444021034,6.26435395516053,1.1183966749518,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0.230615497256059,0.150722640552623,0,0.125666591329675,0,0,0,0,0,0,0,1.75668478206928,1.8850203613211,0,0,0,0,1.04853447583376,0.457500602818626,0.376963056338593,1.04294592115366,1.53429274398198,4.98691306942944,1.1356888414743,0,0,0,0.420883711772948,0.130120442962704,0,0.180062129805349,0,0.0680364991513279,0,0.468508622798644,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89260953707715,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.275936746304732,2.72936002979246,1.05490517932983,0,0,0,0,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0.584511715822624,0,1.60660658210904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680879211507576,0,0,0,0,0,0,0.608929898229199,0,0.21183207086382,0,0,0,0,0,0,0,0.741701208042039,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0.26175594198403,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,9.66682996665071,7.44764167471216,7.56154002312225,8.90607275701835,9.06472676867641,5.40018000185445,7.20513925158753,3.62513927187364,3.62432218226274,0,0,0,0.243106717068294,0,0.183843508450014,0.44449345560323,0,0,0,0.50695859978048,0,0.468207537349412,0,0.0574354689556133,0,0.115884325944855,0.192909220463705,0,0,0,0,0.238436189947321,0,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0,0,0,0.499621155875892,0,0,0.191288332068843,0,0 | |||
|short_description=p@chrX:7218219..7218235,+ | |||
}} | |||
Latest revision as of 10:36, 6 August 2015
| Short description: | p@chrX:7218219..7218235, + |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_at_chrX:7218219..7218235, + |
| Coexpression cluster: | MCL_coexpression_mm9:666 |
| Association with transcript: | NA |
| EntrezGene: | NA |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 8.65e-22 | 23 |
| neuroblast (sensu Vertebrata) | 8.65e-22 | 23 |
| neuron | 4.00e-14 | 33 |
| neuronal stem cell | 4.00e-14 | 33 |
| neuroblast | 4.00e-14 | 33 |
| electrically signaling cell | 4.00e-14 | 33 |
| electrically responsive cell | 2.01e-11 | 39 |
| electrically active cell | 2.01e-11 | 39 |
| neural cell | 4.81e-10 | 43 |
| ectodermal cell | 9.70e-10 | 44 |
| neurectodermal cell | 9.70e-10 | 44 |
| neuron of the substantia nigra | 3.36e-09 | 3 |
| raphe nuclei neuron | 6.48e-09 | 3 |
| neuron of the ventral spinal cord | 7.56e-08 | 3 |