FF:11235-116D2: Difference between revisions

Revision as of 14:55, 15 May 2017

Name:	Astrocyte - cerebral cortex, donor1
Species:	Human (Homo sapiens)
Library ID:	CNhs10864
Sample type:	primary cells
Genomic View:	UCSC
FANTOM CAT:	1, 2, 3, 4, 5, 6, 7, 8, 9, 10, 11
CAGEd-oPOSSUM:	link

Additional information

Sample information

strain	NA
tissue	cerebral cortex
dev stage	fetus
sex	unknown
age	fetal
cell type	astrocyte
cell line	NA
company	Sciencell/3H
collaboration	FANTOM5 OSC CORE (contact: Al Forrest)
External link for information	[{{{sample_info_link}}} {{{sample_info_link}}}]

RNA information

lot number	1086
catalog number	SC1805
sample type	total RNA
extraction protocol (Details)	OP-RNA-extraction-totalRNA-TRIzol-isopropanol-v1.0

CAGE Accession numbers

Method		Sample accession id
CAGE		SAMD00004792

Library accession numbers

Library id		Method		Exp. accession id		Run accession id
CNhs10864		CAGE		DRX008115		DRR008987

Accession ID Hg19

Library id		BAM		CTSS
CNhs10864		DRZ000412		DRZ001797

Download raw sequence, BAM & CTSS

Hg19

BAM	CTSS
[{{{hg19bam}}} download]	[{{{hg19ctss}}} donwload]

Hg38

BAM	CTSS
[{{{hg38bam}}} download]	[{{{hg38ctss}}} donwload]

Relative expression to median (log10)

Transcription factors with enriched expression in this sampleRanked list of transcription factor promoter expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed.

Co-expression clusters with enriched expression in this sampleRanked list of co-expression cluster expression in this sample relative to the median expression in the FANTOM5 collection is shown. Value is log10 transformed. Analyst:NA link to dataset. data

Coexpression cluster	score
C0-CD14-Eosinophils-Neutrophils-Basophils-CD34-immature-Peripheral	0
C1-testis-epididymis-embryonic-medulla-pituitary-trachea-caudate	0
C10-occipital-temporal-parietal-brain-duodenum-Neurons-Neural	0
C100-rhabdomyosarcoma-gastric-pineal-Wilms-cervical-mesodermal-endometrial	0
C101-small-cerebellum-maxillary-colon-parietal-epididymis-merkel	0
C102-neuroblastoma-testicular-pituitary-carcinosarcoma-rectum-acantholytic-iPS	0
C103-CD4-CD8-Natural-Peripheral-Whole-Neutrophils-Basophils	0
C104-Mast-Basophils-immature-CD14-CD34-eye-Natural	0
C105-heart-skeletal-occipital-hippocampus-acute-Sebocyte-penis	-0.0867
C106-Hep2-epitheloid-placenta-cervical-rectal-anaplastic-glassy	0
C107-Neutrophils-CD14-Eosinophils-Monocytederived-Whole-Peripheral-blood	0
C108-breast-hepatoblastoma-MCF7-parotid-salivary-submaxillary-prostate	0
C109-Reticulocytes-non-acute-Hodgkin-Burkitt-retinoblastoma-lymphoma	0.606
C11-cerebellum-medulla-pons-parietal-occipital-middle-medial	0
C110-leukemia-chronic-Eosinophils-acute-Whole-CD34-Lymphatic	0
C111-medulla-lung-trachea-testis-caudate-epididymis-throat	0
C112-gastric-pancreas-temporal-duodenum-small-extraskeletal-adrenal	0
C113-thyroid-throat-lung-lymph-small-colon-trachea	0
C114-teratocarcinoma-medulloblastoma-carcinosarcoma-iPS-anaplastic-acute-neuroblastoma	0
C115-pituitary-Neural-caudate-putamen-amygdala-medulla-hippocampus	0
C116-myeloma-xeroderma-tonsil-CD19-spleen-lymph-trachea	0
C117-serous-clear-kidney-neuroectodermal-mesothelioma-endometrial-Intestinal	0
C118-cerebellum-parietal-occipital-medial-middle-frontal-insula	0
C119-CD4-CD8-Natural-Neutrophils-CD14-Peripheral-CD19	0
C12-Mast-Basophils-immature-chorionic-mature-CD14-Eosinophils	0
C120-immature-salivary-tongue-skin-cervical-CD14-CD34	0
C121-NK-Natural-CD8-CD4-anaplastic-chronic-B	0
C122-chronic-Reticulocytes-skeletal-leukemia-acute-colon-Tracheal	0
C123-CD19-Natural-CD8-CD4-CD14-Peripheral-Basophils	0
C124-small-temporal-duodenum-colon-gall-signet-Hepatocyte	0
C125-mucinous-alveolar-mesothelioma-Smooth-lung-CD14-Nucleus	0
C126-gastrointestinal-argyrophil-smallcell-merkel-bile-insula-brain	0
C127-maxillary-small-hepatoblastoma-hepatocellular-alveolar-colon-argyrophil	0
C128-testicular-choriocarcinoma-H9-teratocarcinoma-pancreatic-iPS-HES3GFP	0
C129-liver-Hepatocyte-colon-duodenum-temporal-testicular-small	0
C13-Neutrophils-Eosinophils-CD14-Monocytederived-Whole-Peripheral-CD4	0
C130-iPS-HES3GFP-H9-teratocarcinoma-testicular-colon-Alveolar	0
C131-lung-trachea-Alveolar-thyroid-umbilical-throat-skin	0
C132-acute-small-Dendritic-Macrophage-CD14-Neutrophils-Monocytederived	0
C133-signet-gall-small-kidney-colon-ductal-adenocarcinoma	0
C134-skeletal-diaphragm-tongue-throat-Skeletal-skin-penis	0
C135-neuroblastoma-retinoblastoma-carcinoid-choriocarcinoma-testicular-acute-rectum	0
C136-Wilms-extraskeletal-anaplastic-rhabdomyosarcoma-cholangiocellular-nonsmall-neuroectodermal	0
C137-large-ductal-melanoma-cervical-Endothelial-Smooth-chronic	0
C138-diffuse-Burkitt-lymphangiectasia-lymphoma-acute-CD19-pineal	0
C139-astrocytoma-skin-salivary-gall-serous-Mallassezderived-renal	0
C14-Whole-blood-Reticulocytes-liver-Neutrophils-Eosinophils-spleen	0
C140-Renal-Endothelial-Hepatic-Lymphatic-heart-lung-spleen	0
C141-Hodgkin-acute-thymus-chronic-vein-CD4-B	0
C142-Preadipocyte-Fibroblast-hepatic-Ewing-Adipocyte-Olfactory-Hair	0
C143-Monocytederived-CD14-Macrophage-Dendritic-Basophils-CD14CD16-Osteoblast	0
C144-CD4-tonsil-NK-appendix-CD8-splenic-mycosis	0
C145-neuroblastoma-peripheral-neuroectodermal-neuroepithelioma-carcinoid-adult-extraskeletal	0
C146-lymphangiectasia-lymphoma-gall-lymph-tonsil-gastric-transitionalcell	0
C147-Neutrophils-Eosinophils-CD4-CD14-CD8-Natural-Peripheral	0
C148-kidney-small-epididymis-pancreas-serous-duodenum-temporal	0
C149-occipital-medial-brain-amygdala-parietal-cerebral-cerebellum	0
C15-anaplastic-small-skeletal-neuroblastoma-parietal-temporal-tongue	0
C150-merkel-carcinoid-nonsmall-gastrointestinal-argyrophil-pineal-small	0
C151-CD14-Natural-Basophils-CD8-Eosinophils-CD4-Mast	0
C152-peripheral-neuroectodermal-neuroepithelioma-neuroblastoma-testicular-carcinoid-lung	0
C153-rhabdomyosarcoma-liposarcoma-pancreatic-somatostatinoma-Reticulocytes-lymphoma-testicular	0
C154-adenocarcinoma-Mesenchymal-Cardiac-small-sacrococcigeal-Smooth-Prostate	0
C155-pituitary-placenta-nonsmall-cervical-smallcell-choriocarcinoma-epitheloid	0
C156-plasma-splenic-hereditary-B-large-xeroderma-b	0
C157-testicular-H9-testis-iPS-teratocarcinoma-colon-trachea	0
C158-adrenal-gastric-temporal-parietal-duodenum-caudate-putamen	0
C159-choriocarcinoma-pancreatic-placenta-chorionic-testicular-bronchioalveolar-seminal	0
C16-medial-amygdala-occipital-parietal-olfactory-putamen-brain	0
C160-medulla-Hepatocyte-retina-corpus-liver-pineal-cerebral	0
C161-mesothelioma-Mesothelial-acute-mesenchymal-extraskeletal-renal-placenta	0
C162-spinal-locus-medulla-substantia-thalamus-globus-diencephalon	0
C163-Skeletal-skeletal-Pericytes-Hepatic-rhabdomyosarcoma-throat-mesenchymal	0
C164-signet-corpus-optic-mucinous-substantia-salivary-choriocarcinoma	0
C165-epithelioid-Adipocyte-mesothelioma-myxofibrosarcoma-lung-gastric-Mesothelial	0
C166-Macrophage-Monocytederived-Dendritic-adipose-lymph-CD14-lung	0
C167-Basophils-Mast-Eosinophils-Neutrophils-Peripheral-Whole-CD4	0
C168-Mast-CD14-immature-Basophils-Eosinophils-CD34-Peripheral	0
C169-hereditary-adult-gall-lymphangiectasia-chronic-b-choriocarcinoma	0
C17-Mast-CD14-Monocytederived-Lymphatic-Smooth-mesenchymal-Macrophage	0
C170-epitheloid-cervical-Hep2-keratoacanthoma-adult-neuroblastoma-signet	0
C171-merkel-neuroblastoma-pineal-retinoblastoma-carcinoid-small-eye	0
C172-chorionic-skeletal-tongue-amniotic-liver-gastrointestinal-Pericytes	0
C173-Adipocyte-mature-skin-left-Hepatocyte-Osteoblast-adipose	0
C174-CD14-Neutrophils-Smooth-mesothelioma-embryonic-Monocytederived-Eosinophils	0
C175-Eosinophils-Neutrophils-CD4-Basophils-CD19-CD8-Natural	0
C176-Eosinophils-Neutrophils-Mast-CD14-CD4-Basophils-CD19	0.0071
C177-melanoma-Melanocyte-mesenchymal-retina-Mallassezderived-Gingival-squamous	0
C178-spleen-liver-Hepatocyte-b-lymph-vein-thymus	0
C179-CD19-Peripheral-lymphoma-blood-lymph-spleen-tonsil	0
C18-CD4-CD8-thymus-Whole-Peripheral-Natural-blood	0
C180-skeletal-heart-Hepatocyte-acute-occipital-hippocampus-middle	-0.225
C181-liposarcoma-somatostatinoma-neuroblastoma-mesothelioma-nonsmall-small-Alveolar	0
C182-renal-mature-mesothelioma-lung-Mammary-Adipocyte-acute	0
C183-acute-non-CD34-diffuse-CD133-myeloma-Burkitt	0
C184-somatostatinoma-smallcell-nonsmall-small-gastrointestinal-pineal-thyroid	0
C185-small-adrenal-gastric-Mesenchymal-acute-HES3GFP-testis	0
C186-squamous-papillotubular-large-Tracheal-oral-Small-epidermoid	0
C187-migratory-immature-Dendritic-CD19-CD14-Monocytederived-Macrophage	0
C188-left-heart-tongue-skeletal-Skeletal-diaphragm-throat	0
C189-b-splenic-tonsil-CD19-lymph-appendix-spleen	0
C19-embryonic-testis-cord-chronic-CD14-NK-mesothelioma	0
C190-colon-small-rectum-duodenum-appendix-temporal-oral	0
C191-leiomyoblastoma-Mast-parietal-acute-bone-neuroepithelioma-embryonic	0
C192-Neutrophils-CD14-Peripheral-Eosinophils-CD8-Natural-CD4	0
C193-Mesenchymal-Adipocyte-mature-Cardiac-heart-CD14CD16-CD14	0
C194-MCF7-breast-prostate-Intestinal-diffuse-Wilms-Alveolar	0
C195-Small-Gingival-Bronchial-Smooth-mesenchymal-Urothelial-Tracheal	0
C196-testicular-iPS-H9-teratocarcinoma-HES3GFP-choriocarcinoma-endometrial	0
C197-tongue-esophagus-tonsil-salivary-cervix-nasal-Gingival	0
C198-Mesenchymal-Hair-Hepatic-Fibroblast-Smooth-tenocyte-Pericytes	0
C199-glioblastoma-B-osteosarcoma-Fibroblast-heart-rhabdomyosarcoma-myxofibrosarcoma	0
C2-Eosinophils-Neutrophils-CD14-Whole-Basophils-Peripheral-Mast	0
C20-heart-left-skeletal-diaphragm-tongue-umbilical-throat	0
C200-seminal-Cardiac-Smooth-Hair-submaxillary-Neutrophils-mixed	-0.177
C201-colon-small-adenocarcinoma-duodenum-temporal-signet-gall	0
C202-salivary-skin-penis-tongue-uterus-cervical-immature	0
C203-acute-NK-chronic-CD133-lymphoma-immature-Dendritic	0
C204-Smooth-nasal-CD4-CD19-CD8-CD14-CD34	0
C205-mycosis-cord-hairy-xeroderma-CD4-B-b	0
C206-melanoma-somatostatinoma-nonsmall-small-neuroblastoma-smallcell-pituitary	0
C207-Corneal-Keratinocyte-Esophageal-Mammary-Bronchial-Urothelial-Sebocyte	0
C208-skin-amniotic-papillotubular-salivary-umbilical-Alveolar-serous	0
C209-acute-myelodysplastic-CD34-granulocyte-CD133-liver-spleen	0
C21-cord-mycosis-hairy-xeroderma-adult-CD4-anaplastic	0
C210-Burkitt-lymphoma-appendix-acute-diffuse-CD19-tonsil	0
C211-small-Hepatocyte-liver-colon-temporal-duodenum-kidney	0
C212-chronic-acute-Whole-Reticulocytes-leukemia-blood-CD34	0
C213-CD14-Natural-CD8-CD4-Basophils-Eosinophils-Peripheral	0
C214-Neurons-Neural-duodenum-temporal-occipital-parietal-brain	0.109
C215-chronic-acute-peripheral-Hepatocyte-osteosarcoma-NK-immature	0
C216-osteosarcoma-Smooth-Mesenchymal-large-neuroectodermal-acute-CD34	0
C217-carcinoid-neuroectodermal-mature-mesodermal-colon-acute-occipital	0
C218-tonsil-lymph-CD19-spleen-colon-appendix-salivary	0
C219-nasal-Basophils-amniotic-Melanocyte-CD14-Osteoblast-duodenum	0
C22-CD4-CD8-Natural-Basophils-CD14-Peripheral-CD19	0
C220-Adipocyte-mature-left-breast-skin-liver-adipose	0
C221-alveolar-Osteoblast-Myoblast-mesenchymal-liposarcoma-Smooth-hepatocellular	0
C222-Melanocyte-Tracheal-Neutrophils-seminal-Smooth-Hair-Chondrocyte	-0.158
C223-Chondrocyte-basal-renal-Fibroblast-Smooth-spindle-Synoviocyte	0
C224-clear-serous-pleomorphic-choriocarcinoma-mesothelioma-amniotic-renal	0
C225-ductal-alveolar-giant-prostate-salivary-squamous-Tracheal	0
C226-Corneal-Keratinocyte-Esophageal-Urothelial-Mammary-Bronchial-Tracheal	0
C227-chorionic-amniotic-Mesenchymal-Placental-gastric-diaphragm-tongue	0
C228-colon-Intestinal-Prostate-hepatoblastoma-hepatocellular-testis-adult	0
C229-Mesenchymal-CD4-Melanocyte-acute-skeletal-left-heart	0
C23-CD4-CD8-Natural-Peripheral-Basophils-CD19-CD14	0
C230-aorta-normal-heart-penis-osteosarcoma-basal-lung	0
C231-Mesothelial-mesenchymal-mesothelioma-Fibroblast-Preadipocyte-leiomyoma-mycosis	0
C232-teratocarcinoma-HES3GFP-H9-iPS-testicular-neuroblastoma-cerebellum	0
C233-uterus-cervix-ovary-epididymis-colon-rectum-MCF7	0
C234-oral-epidermoid-malignant-cervical-ductal-lung-keratoacanthoma	0
C235-Intestinal-Prostate-liver-colon-small-kidney-pancreas	0
C236-CD14-Neutrophils-Monocytederived-renal-Eosinophils-testis-mesothelioma	0
C237-acute-breast-testicular-hepatoblastoma-chronic-argyrophil-Bronchial	0
C238-stomach-gall-breast-duodenum-temporal-MCF7-smallcell	0
C239-CD4-lymphangiectasia-CD8-NK-mycosis-Renal-hairy	0
C24-pineal-eye-retina-retinoblastoma-medulloblastoma-small-cerebral	0
C240-Adipocyte-Preadipocyte-Osteoblast-Chondrocyte-tenocyte-Synoviocyte-mesenchymal	0
C241-Reticulocytes-chronic-Tracheal-Hodgkin-Endothelial-Hair-thymus	0.636
C242-acute-Chondrocyte-myelodysplastic-granulocyte-biphenotypic-Fibroblast-stomach	0
C243-Chondrocyte-trachea-Synoviocyte-mesodermal-renal-Fibroblast-Ewing	0
C244-CD14-Monocytederived-Hepatocyte-heart-Neutrophils-acute-Macrophage	0
C245-prostate-penis-salivary-esophagus-kidney-Neutrophils-Pancreatic	0
C246-Neutrophils-Eosinophils-Whole-CD14-CD14CD16-Basophils-migratory	0
C247-pons-locus-medulla-spinal-paracentral-medial-occipital	0
C248-iPS-Aortic-Hep2-amygdala-acute-medial-Myoblast	0
C249-nonsmall-small-smallcell-occipital-somatostatinoma-maxillary-medial	0
C25-small-colon-temporal-duodenum-liver-Hepatocyte-gall	0
C250-Mast-Neutrophils-CD14-Eosinophils-CD8-Peripheral-CD4	0
C251-gall-tonsil-trachea-CD14-salivary-throat-tongue	0
C252-hepatic-Olfactory-sacrococcigeal-leiomyoma-normal-Synoviocyte-glioblastoma	0
C253-spleen-rhabdomyosarcoma-Hepatocyte-small-uterus-liver-rectum	0
C254-prostate-rhabdomyosarcoma-seminal-Fibroblast-transitionalcell-Smooth-Iris	0
C255-Wilms-leiomyoblastoma-kidney-adrenal-MCF7-epithelioid-Mast	0
C256-occipital-caudate-amygdala-medial-thalamus-hippocampus-medulla	0
C257-pineal-insula-frontal-occipital-temporal-medial-paracentral	0
C258-hepatoblastoma-hepatocellular-signet-colon-Intestinal-Prostate-gastric	0
C259-Preadipocyte-Adipocyte-Fibroblast-Chondrocyte-tenocyte-normal-Ewing	0
C26-Eosinophils-Neutrophils-CD14-CD14CD16-Basophils-Monocytederived-Whole	0
C260-acute-chronic-Natural-NK-Basophils-biphenotypic-blood	0
C261-locus-medial-parietal-pons-diencephalon-olfactory-spinal	0
C262-breast-MCF7-skeletal-Reticulocytes-mucinous-hepatoblastoma-Wilms	0
C263-cervical-keratoacanthoma-tongue-skin-esophagus-throat-tonsil	0
C264-giant-keratoacanthoma-colon-fibrosarcoma-HES3GFP-Hep2-acute	0
C265-CD4-Eosinophils-CD14-Natural-CD19-Basophils-CD8	0.0145
C266-acute-chronic-leukemia-small-choriocarcinoma-hepatoma-Mast	0
C267-pancreatic-placenta-choriocarcinoma-testicular-teratocarcinoma-chorionic-clear	0
C268-Mallassezderived-Urothelial-Gingival-Small-Bronchial-Tracheal-Prostate	0
C269-Basophils-Mast-Eosinophils-mature-CD14-chorionic-CD4	0
C27-pancreas-temporal-duodenum-salivary-ductus-umbilical-lung	0
C270-CD4-Fibroblast-acute-iPS-Aortic-CD34-Smooth	0.013
C271-pineal-spinal-locus-globus-medulla-thalamus-cerebellum	0
C272-CD19-CD4-CD8-Whole-Peripheral-lymph-tonsil	0
C273-Neutrophils-CD14-Eosinophils-Monocytederived-CD4-Natural-Mast	0
C274-CD14-Mast-immature-Basophils-mature-vagina-Hepatocyte	0
C275-pons-medulla-cerebellum-locus-thalamus-diencephalon-spinal	0
C276-mesothelioma-kidney-renal-small-clear-cerebellum-Renal	0
C277-mesothelioma-epithelioid-thyroid-extraskeletal-alveolar-glioblastoma-adenocarcinoma	0
C278-amygdala-hippocampus-insula-medial-putamen-temporal-olfactory	0
C279-parietal-cerebellum-occipital-temporal-middle-duodenum-medial	0
C28-thymus-acute-vein-Hodgkin-chronic-throat-Dendritic	0
C280-Mast-Natural-CD19-CD8-Eosinophils-CD34-CD4	0
C281-Hodgkin-Reticulocytes-chronic-NK-acute-retinoblastoma-small	0.488
C282-acute-B-tonsil-CD19-submaxillary-lymph-throat	0
C283-tenocyte-Chondrocyte-mesenchymal-Macrophage-pleomorphic-Synoviocyte-cholangiocellular	0
C284-parietal-occipital-medial-temporal-olfactory-locus-hippocampus	0.386
C285-cervical-Hep2-small-colon-temporal-duodenum-bronchogenic	0
C286-cerebellum-occipital-optic-parietal-globus-caudate-medial	0
C287-Hepatocyte-Chondrocyte-Adipocyte-Synoviocyte-liver-tenocyte-mesenchymal	0
C288-Chondrocyte-Renal-Pericytes-Fibroblast-aorta-Smooth-Meningeal	0
C289-chorionic-skeletal-heart-Mast-amniotic-granulosa-left	0
C29-mature-adipose-Adipocyte-breast-Lymphatic-vein-heart	0
C290-Eosinophils-CD14-Basophils-Mast-CD4-CD8-immature	0
C291-spinal-substantia-retina-medulla-tongue-skeletal-trachea	0
C292-Mesenchymal-skin-umbilical-Adipocyte-mesenchymal-Chondrocyte-skeletal	0
C293-CD14-CD14CD16-Basophils-Peripheral-immature-Eosinophils-CD34	0
C294-CD14-Macrophage-Monocytederived-CD14CD16-Neutrophils-Basophils-Peripheral	0
C295-Fibroblast-Smooth-Myoblast-Chondrocyte-hepatic-Synoviocyte-Preadipocyte	0.109
C296-gall-small-mesothelioma-acute-bronchioalveolar-epidermoid-mixed	0
C297-Eosinophils-CD4-Basophils-Natural-Neutrophils-CD8-Peripheral	0
C298-small-optic-substantia-thalamus-diencephalon-globus-occipital	0
C299-CD14CD16-Eosinophils-Neutrophils-CD14-Whole-Basophils-blood	0
C3-occipital-temporal-insula-medial-postcentral-frontal-amygdala	0
C30-thyroid-throat-mesothelioma-mucinous-trachea-chorionic-mesenchymal	0
C300-CD4-CD8-NK-Natural-blood-mycosis-Basophils	0
C301-Smooth-mesenchymal-Endothelial-Hepatic-basal-hepatic-chorionic	0.109
C302-acute-peripheral-Neutrophils-NK-myelodysplastic-CD34-carcinoid	0
C303-CD14-Basophils-Peripheral-Eosinophils-CD14CD16-Neutrophils-Whole	0
C305-heart-skeletal-smooth-left-bladder-penis-esophagus	0
C31-skeletal-tongue-diaphragm-throat-penis-skin-trachea	0
C32-middle-occipital-parietal-hippocampus-amygdala-medial-olfactory	0
C33-Reticulocytes-liver-Whole-blood-chronic-acute-spleen	0
C34-placenta-chorionic-choriocarcinoma-mesothelioma-Wilms-Smooth-bile	0
C35-caudate-putamen-diencephalon-nucleus-globus-thalamus-insula	0
C36-B-b-splenic-plasma-xeroderma-adrenal-Burkitt	0
C37-salivary-submaxillary-parotid-seminal-tongue-ductus-trachea	0
C38-extraskeletal-rhabdomyosarcoma-adrenal-rectal-mesothelioma-lung-Wilms	0
C39-epididymis-ductus-seminal-testis-acute-thyroid-CD133	0
C4-optic-corpus-substantia-medulla-spinal-thalamus-globus	0
C40-eye-retina-Lens-pineal-tongue-retinoblastoma-small	0
C41-retina-eye-medulla-Retinal-medulloblastoma-kidney-pineal	0
C42-small-lung-maxillary-pharyngeal-Mesenchymal-Wilms-colon	0
C43-ductus-seminal-duodenum-temporal-gall-prostate-bladder	0
C44-Dendritic-CD19-CD133-granulocyte-acute-thymus-immature	0
C45-testicular-choriocarcinoma-H9-teratocarcinoma-Wilms-pancreatic-iPS	0
C46-acute-Hodgkin-thymus-CD8-chronic-CD4-merkel	0
C47-CD19-Burkitt-acute-xeroderma-tonsil-lymphoma-appendix	0
C48-smooth-bladder-esophagus-colon-penis-aorta-uterus	0
C49-H9-iPS-testicular-HES3GFP-teratocarcinoma-hepatoblastoma-choriocarcinoma	0
C5-Hepatocyte-liver-hepatocellular-Intestinal-kidney-small-pancreas	0
C50-chorionic-placenta-amniotic-migratory-smallcell-chronic-choriocarcinoma	0
C51-kidney-mesothelioma-renal-signet-gall-lung-pancreas	0
C52-adult-NK-chronic-cord-testis-embryonic-myeloma	0
C53-medulloblastoma-pineal-retinoblastoma-small-retina-eye-pituitary	0
C54-Dendritic-Macrophage-Monocytederived-CD14-leiomyoma-adipose-immature	0
C55-hepatocellular-Intestinal-liver-Prostate-fibrosarcoma-Hepatocyte-hepatoblastoma	0
C56-heart-left-umbilical-skeletal-penis-diaphragm-tongue	0
C57-Neutrophils-Eosinophils-Whole-CD4-CD8-CD19-Natural	0
C58-Melanocyte-melanoma-retina-Retinal-eye-migratory-H9	0
C59-Smooth-Fibroblast-Mesenchymal-tenocyte-Ewing-skin-hepatic	0.109
C6-CD14-Eosinophils-Basophils-Peripheral-CD34-Natural-immature	0
C60-esophagus-tonsil-throat-tongue-uterus-cervix-cervical	0
C61-migratory-Dendritic-immature-Macrophage-xeroderma-cord-b	0
C62-Burkitt-tonsil-CD19-submaxillary-spleen-salivary-lymph	0
C63-neuroectodermal-neuroblastoma-carcinoid-peripheral-chronic-neuroepithelioma-acute	0
C64-Mast-chronic-acute-immature-chorionic-Basophils-Dendritic	0
C65-CD14-Eosinophils-Monocytederived-Basophils-immature-Macrophage-Neutrophils	0
C66-cerebellum-middle-occipital-parietal-medial-amygdala-hippocampus	0
C67-CD14-Monocytederived-Macrophage-dura-Dendritic-spleen-lung	0
C68-amniotic-chorionic-Placental-salivary-placenta-tongue-mesothelioma	0
C69-anaplastic-CD14-cord-hairy-mycosis-adult-NK	0
C7-CD14-Eosinophils-Neutrophils-Smooth-Basophils-Macrophage-Mast	0
C70-parotid-submaxillary-salivary-throat-trachea-aorta-tongue	0
C71-Monocytederived-Macrophage-CD14-Dendritic-Osteoblast-leiomyoma-Prostate	0
C72-skeletal-tongue-throat-heart-diaphragm-penis-left	0
C73-pineal-eye-retina-caudate-cerebellum-left-parietal	0
C74-splenic-B-b-plasma-xeroderma-lymphoma-hairy	0
C75-Eosinophils-Natural-CD8-Basophils-CD14-CD4-Peripheral	0
C76-argyrophil-gastrointestinal-temporal-duodenum-neuroblastoma-merkel-smallcell	0
C77-Saos2-osteosarcoma-Neutrophils-Natural-Chondrocyte-Basophils-CD8	0
C78-lymphoma-plasma-tonsil-appendix-lymph-seminal-trachea	0
C79-chorionic-Chondrocyte-Cardiac-Smooth-Fibroblast-Preadipocyte-Mesenchymal	0
C8-Natural-CD8-Basophils-CD4-CD14-Peripheral-CD34	0
C80-immature-migratory-CD14-Dendritic-splenic-cord-Mast	0
C81-trachea-salivary-throat-aorta-eye-submaxillary-parotid	0
C82-Basophils-CD14-Eosinophils-Natural-Peripheral-immature-CD34	0
C83-choriocarcinoma-pancreatic-placenta-chorionic-HES3GFP-testicular-amniotic	0
C84-choriocarcinoma-pancreatic-Wilms-Mallassezderived-thymus-salivary-colon	0
C85-neuroblastoma-carcinoid-retinoblastoma-small-pineal-rhabdomyosarcoma-medulloblastoma	0
C86-colon-carcinoid-small-neuroectodermal-giant-large-neuroepithelioma	0
C87-retinoblastoma-left-nonsmall-heart-small-diaphragm-bronchogenic	0
C88-Melanocyte-melanoma-Macrophage-Mesenchymal-migratory-Dendritic-Monocytederived	0
C89-small-retinoblastoma-medulloblastoma-iPS-acantholytic-eye-bronchogenic	0
C9-skeletal-diaphragm-tongue-throat-penis-heart-left	0
C90-neuroectodermal-peripheral-neuroepithelioma-neuroblastoma-carcinoid-parietal-putamen	0
C91-Fibroblast-Smooth-mesenchymal-Mesothelial-Small-Preadipocyte-Hair	0
C92-CD14CD16-CD14-Eosinophils-Basophils-Neutrophils-Macrophage-Whole	0
C93-chronic-acute-leukemia-acantholytic-medulloblastoma-testis-papillotubular	0
C94-smallcell-adrenal-lung-nonsmall-small-somatostatinoma-teratocarcinoma	0
C95-lung-aorta-trachea-penis-Alveolar-throat-endometrioid	0
C96-non-acute-tonsil-spleen-Burkitt-lymphoma-appendix	0
C97-small-smallcell-gastrointestinal-argyrophil-putamen-duodenum-brain	0
C98-CD8-Natural-Basophils-blood-CD4-Peripheral-Whole	0
C99-hairy-mycosis-submaxillary-salivary-cord-kidney-parotid	0

Repeat families with enriched expression in this sampleSummary:Ranked list of repeat family expression in this sample relative tothe median expression in the FANTOM5 collection is shown. Value is log10transformed. Analyst:NA link to dataset. data

TFBS(DNA)motifs over-represented in proximal region of promoters active in this sample

JASPAR motifsSummary:Association of JASPAR motif to the promoter expression in thissample. Pearson's correlation between the number of TFBSs estimated byusing the position-weight matrix for each promoter and its expression isexpressed as Z-score by taking the ones based on random position-weightmatrix, and the tail probability of the normal distribution correspondingto the Z-score is taken as the resulting P-value. Lower P-value indicatesmore (non-random) association of the motif to promoter expression Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10864

Jaspar motif	Logo	P-value
MA0002.2	MA0002.2	5.34034e-4
MA0003.1	MA0003.1	0.0724
MA0004.1	MA0004.1	0.135
MA0006.1	MA0006.1	0.84
MA0007.1	MA0007.1	0.283
MA0009.1	MA0009.1	0.323
MA0014.1	MA0014.1	0.692
MA0017.1	MA0017.1	0.00203
MA0018.2	MA0018.2	0.668
MA0019.1	MA0019.1	0.717
MA0024.1	MA0024.1	9.29176e-6
MA0025.1	MA0025.1	0.189
MA0027.1	MA0027.1	0.546
MA0028.1	MA0028.1	0.354
MA0029.1	MA0029.1	0.262
MA0030.1	MA0030.1	0.288
MA0031.1	MA0031.1	0.0468
MA0035.2	MA0035.2	0.0295
MA0038.1	MA0038.1	3.96053e-7
MA0039.2	MA0039.2	0.524
MA0040.1	MA0040.1	0.0563
MA0041.1	MA0041.1	0.339
MA0042.1	MA0042.1	0.367
MA0043.1	MA0043.1	0.673
MA0046.1	MA0046.1	0.468
MA0047.2	MA0047.2	2.47978e-4
MA0048.1	MA0048.1	0.53
MA0050.1	MA0050.1	0.0449
MA0051.1	MA0051.1	0.172
MA0052.1	MA0052.1	0.029
MA0055.1	MA0055.1	0.511
MA0057.1	MA0057.1	0.26
MA0058.1	MA0058.1	0.0936
MA0059.1	MA0059.1	0.0625
MA0060.1	MA0060.1	3.15009e-13
MA0061.1	MA0061.1	0.00779
MA0062.2	MA0062.2	0.671
MA0065.2	MA0065.2	7.38446e-4
MA0066.1	MA0066.1	0.0707
MA0067.1	MA0067.1	0.493
MA0068.1	MA0068.1	5.98816e-6
MA0069.1	MA0069.1	0.866
MA0070.1	MA0070.1	0.234
MA0071.1	MA0071.1	0.107
MA0072.1	MA0072.1	0.331
MA0073.1	MA0073.1	0.776
MA0074.1	MA0074.1	0.254
MA0076.1	MA0076.1	0.161
MA0077.1	MA0077.1	0.065
MA0078.1	MA0078.1	0.663
MA0079.2	MA0079.2	0.572
MA0080.2	MA0080.2	7.46339e-14
MA0081.1	MA0081.1	0.072
MA0083.1	MA0083.1	0.882
MA0084.1	MA0084.1	0.741
MA0087.1	MA0087.1	0.819
MA0088.1	MA0088.1	0.416
MA0090.1	MA0090.1	0.4
MA0091.1	MA0091.1	0.0133
MA0092.1	MA0092.1	0.427
MA0093.1	MA0093.1	0.159
MA0099.2	MA0099.2	1.32257e-8
MA0100.1	MA0100.1	0.271
MA0101.1	MA0101.1	0.0448
MA0102.2	MA0102.2	0.0216
MA0103.1	MA0103.1	0.0236
MA0104.2	MA0104.2	0.253
MA0105.1	MA0105.1	3.25758e-4
MA0106.1	MA0106.1	0.105
MA0107.1	MA0107.1	0.0224
MA0108.2	MA0108.2	0.375
MA0111.1	MA0111.1	0.704
MA0112.2	MA0112.2	8.13373e-5
MA0113.1	MA0113.1	0.19
MA0114.1	MA0114.1	0.0374
MA0115.1	MA0115.1	0.614
MA0116.1	MA0116.1	0.00202
MA0117.1	MA0117.1	0.891
MA0119.1	MA0119.1	0.287
MA0122.1	MA0122.1	0.852
MA0124.1	MA0124.1	0.106
MA0125.1	MA0125.1	0.0036
MA0131.1	MA0131.1	0.475
MA0135.1	MA0135.1	0.675
MA0136.1	MA0136.1	9.97685e-13
MA0137.2	MA0137.2	0.652
MA0138.2	MA0138.2	0.2
MA0139.1	MA0139.1	0.278
MA0140.1	MA0140.1	0.0278
MA0141.1	MA0141.1	0.0256
MA0142.1	MA0142.1	0.00439
MA0143.1	MA0143.1	0.0158
MA0144.1	MA0144.1	0.0961
MA0145.1	MA0145.1	0.229
MA0146.1	MA0146.1	0.0403
MA0147.1	MA0147.1	0.218
MA0148.1	MA0148.1	0.00575
MA0149.1	MA0149.1	0.021
MA0150.1	MA0150.1	3.29073e-4
MA0152.1	MA0152.1	0.0605
MA0153.1	MA0153.1	0.646
MA0154.1	MA0154.1	0.00411
MA0155.1	MA0155.1	0.623
MA0156.1	MA0156.1	1.32052e-4
MA0157.1	MA0157.1	0.0257
MA0159.1	MA0159.1	0.0157
MA0160.1	MA0160.1	0.0221
MA0162.1	MA0162.1	0.4
MA0163.1	MA0163.1	2.09135e-6
MA0164.1	MA0164.1	0.443
MA0258.1	MA0258.1	0.00377
MA0259.1	MA0259.1	0.485

FANTOM5 phase1 novel unique motifsSummary:Association of the 169 novel and unique motifs discovered in FANTOM5 phase1 in this sample. Among the de-novo motifs discovered by DMF, HOMER,ChIPMunk, and ScanAll, only novel motifs are selected after comparison with known motif sets, and their clustering based on MACRO-APE resulted in169 novel and unique motifs. Their association to the promoter expression is evaluated in the same way to the JASPAR motif above Analyst: Michiel de Hoon link to dataset. data

library id: CNhs10864

Novel motif	Logo	P-value
1	1	0.0532
10	10	0.108
100	100	0.868
101	101	0.982
102	102	0.491
103	103	0.0847
104	104	0.526
105	105	0.907
106	106	0.0174
107	107	0.683
108	108	0.34
109	109	0.0157
11	11	0.045
110	110	0.204
111	111	0.0138
112	112	0.0245
113	113	0.44
114	114	0.00329
115	115	0.447
116	116	0.863
117	117	0.0541
118	118	0.229
119	119	0.107
12	12	0.33
120	120	0.193
121	121	0.904
122	122	0.412
123	123	0.54
124	124	0.463
125	125	0.834
126	126	0.162
127	127	0.144
128	128	0.293
129	129	0.292
13	13	0.27
130	130	0.115
131	131	0.858
132	132	0.98
133	133	0.332
134	134	0.668
135	135	0.37
136	136	0.418
137	137	0.24
138	138	0.0747
139	139	0.00305
14	14	0.949
140	140	0.0872
141	141	0.235
142	142	0.674
143	143	6.41796e-4
144	144	0.98
145	145	0.916
146	146	0.937
147	147	0.534
148	148	0.0622
149	149	0.11
15	15	0.0999
150	150	0.415
151	151	0.324
152	152	0.035
153	153	0.488
154	154	0.816
155	155	0.0573
156	156	0.566
157	157	0.373
158	158	0.195
159	159	0.917
16	16	0.177
160	160	0.164
161	161	0.505
162	162	0.903
163	163	0.395
164	164	0.0159
165	165	0.296
166	166	0.157
167	167	0.77
168	168	0.505
169	169	0.00952
17	17	0.0799
18	18	0.0496
19	19	0.345
2	2	0.457
20	20	0.982
21	21	0.361
22	22	0.206
23	23	0.0647
24	24	0.545
25	25	0.518
26	26	0.18
27	27	0.182
28	28	0.943
29	29	0.0899
3	3	0.0823
30	30	0.954
31	31	0.697
32	32	0.023
33	33	0.486
34	34	0.624
35	35	0.291
36	36	0.193
37	37	0.0437
38	38	0.235
39	39	0.949
4	4	0.66
40	40	0.143
41	41	0.225
42	42	0.253
43	43	0.111
44	44	0.116
45	45	0.578
46	46	0.0637
47	47	0.132
48	48	0.197
49	49	0.12
5	5	0.198
50	50	0.631
51	51	0.277
52	52	0.486
53	53	0.803
54	54	0.296
55	55	0.238
56	56	0.43
57	57	0.485
58	58	0.181
59	59	0.0572
6	6	0.991
60	60	0.066
61	61	0.168
62	62	0.1
63	63	0.207
64	64	0.361
65	65	0.0893
66	66	0.503
67	67	0.418
68	68	0.551
69	69	0.557
7	7	0.311
70	70	0.0069
71	71	0.0593
72	72	0.176
73	73	0.0269
74	74	0.531
75	75	0.0411
76	76	0.25
77	77	0.107
78	78	0.134
79	79	0.0783
8	8	0.26
80	80	0.875
81	81	0.499
82	82	0.0432
83	83	0.94
84	84	0.338
85	85	0.00713
86	86	0.184
87	87	0.453
88	88	0.947
89	89	0.127
9	9	0.323
90	90	0.72
91	91	0.645
92	92	0.0363
93	93	0.0756
94	94	0.0643
95	95	0.0354
96	96	0.192
97	97	0.66
98	98	0.274
99	99	0.99

de novo motifs identified by HOMER in promoters active in this sampleSummary:The result of HOMER in this sample is shown. Analyst:NA library id: CNhs10864

FANTOM5 (FF) ontology

Direct parent terms

is_a relathionship
EFO:0002091 biological replicate
FF:0000194 human astrocyte of the cerebral cortex sample

Ancestor terms (non development)Summary:Connected ontology terms with is_a, part_of or located_in relationship Analyst: Hideya Kawaji link to source data data

CL: Cell type
0000000 (cell), 0000000 (cell)
0000003 (native cell)
0000548 (animal cell)
0002371 (somatic cell)
0002319 (neural cell)
0000095 (neuron associated cell)
0000243 (glial cell (sensu Vertebrata))
0000128 (oligodendrocyte)
0000126 (macroglial cell)
0000125 (glial cell)
0000255 (eukaryotic cell)
0000127 (astrocyte)
0002605 (astrocyte of the cerebral cortex)

UBERON: Anatomy
0000468 (multi-cellular organism)
0000955 (brain)
0000956 (cerebral cortex)
0004121 (ectoderm-derived structure)
0000064 (organ part)
0010314 (structure with developmental contribution from neural crest)
0011216 (organ system subdivision)
0000062 (organ)
0000061 (anatomical structure)
0000465 (material anatomical entity)
0000481 (multi-tissue structure)
0000073 (regional part of nervous system)
0000477 (anatomical cluster)
0003528 (brain grey matter)
0002791 (regional part of telencephalon)
0000467 (anatomical system)
0001062 (anatomical entity)
0000480 (anatomical group)
0002616 (regional part of brain)
0002780 (regional part of forebrain)
0002020 (gray matter)
0010317 (germ layer / neural crest derived structure)
0001017 (central nervous system)
0001016 (nervous system)
0001869 (cerebral hemisphere)
0001893 (telencephalon)
0001890 (forebrain)
0000203 (pallium)

FF: FANTOM5
0000102 (sample by type)
0000210 (human sample)
0000002 (in vivo cell sample)
0000101 (sample by species)
0000001 (sample)
0000194 (human astrocyte of the cerebral cortex sample)

Ancestor terms (development)Summary:Connected ontology terms with develops_from, derives_from or preceded_by relationship Analyst: Hideya Kawaji link to source data data
CL:0000133 (neurectodermal cell)
CL:0000339 (glioblast (sensu Vertebrata))
CL:0000221 (ectodermal cell)

@@ Line 13: / Line 13: @@
 |def=
 |expression_enrichment_score=chr3:181429704..181429722,+!p1@SOX2!2.34!215.82!SOX2;;chr4:57547454..57547469,-!p1@HOPX!2.09!120.79!HOPX;;chr14:29234581..29234601,+!p2@FOXG1!2.08!118.22!FOXG1;;chr2:105470562..105470582,+!p@chr2:105470562..105470582,+!2.01!100.47!POU3F3;;chr14:33403881..33403924,+!p1@NPAS3!2.00!99.61!NPAS3;;chr3:181429741..181429767,+!p2@SOX2!1.94!86.16!SOX2;;chr14:29235961..29236008,+!p1@FOXG1!1.90!78.14!FOXG1;;chrX:25034067..25034088,-!p1@ARX!1.87!72.99!ARX;;chr9:126774018..126774055,+!p1@LHX2!1.73!52.09!LHX2;;chr2:105470536..105470556,+!p@chr2:105470536..105470556,+!1.65!43.79!POU3F3;;chr14:29236269..29236285,+!p3@FOXG1!1.60!38.64!FOXG1;;chr6:19837592..19837621,+!p1@ID4!1.58!216.39!ID4;;chr7:100065686..100065701,-!p2@TSC22D4!1.58!36.92!TSC22D4;;chr1:2985760..2985774,+!p1@PRDM16!1.53!32.63!PRDM16;;chr11:31839488..31839515,-!p3@PAX6!1.50!30.34!PAX6;;chr13:72441315..72441454,-!p1@DACH1!1.49!58.11!DACH1;;chr11:31832658..31832681,-!p1@PAX6!1.48!28.91!PAX6;;chr19:13134772..13134822,+!p2@NFIX!1.46!40.07!NFIX;;chr11:31832862..31832884,-!p2@PAX6!1.46!28.05!PAX6;;chr6:108487289..108487302,+!p1@NR2E1!1.44!26.62!NR2E1;;chrX:139587228..139587234,-!p1@SOX3!1.44!26.33!SOX3;;chr16:51185172..51185197,-!p1@SALL1!1.43!26.05!SALL1;;chr6:45296048..45296082,+!p1@RUNX2!1.41!28.34!RUNX2;;chr6:99282475..99282501,+!p1@POU3F2!1.38!23.19!POU3F2;;chr2:63277948..63277974,+!p1@OTX1!1.37!22.33!OTX1;;chr10:119302232..119302265,+!p1@EMX2!1.35!21.18!EMX2;;chr20:20348740..20348757,+!p1@INSM1!1.34!20.90!INSM1;;chrX:82763292..82763317,+!p1@POU3F4!1.34!20.90!POU3F4;;chr2:5832508..5832524,+!p1@SOX11!1.33!20.61!SOX11;;chr14:33403648..33403710,+!p3@NPAS3!1.31!19.46!NPAS3;;chr9:126773880..126773895,+!p2@LHX2!1.31!19.46!LHX2;;chr15:57511609..57511651,+!p2@TCF12!1.30!31.77!TCF12;;chr6:99282592..99282616,+!p3@POU3F2!1.30!19.18!POU3F2;;chr6:99282438..99282457,+!p2@POU3F2!1.29!18.32!POU3F2;;chr13:72441074..72441172,-!p2@DACH1!1.28!18.03!DACH1;;chr15:37392724..37392757,-!p1@MEIS2!1.24!73.28!MEIS2;;chr14:73360799..73360817,-!p1@DPF3!1.24!56.67!DPF3;;chr20:55204351..55204377,+!p1@TFAP2C!1.24!20.61!TFAP2C;;chr4:57547751..57547764,-!p6@HOPX!1.24!16.32!HOPX;;chr9:126774058..126774081,+!p3@LHX2!1.24!16.32!LHX2;;chr18:53068911..53068935,-!p4@TCF4!1.23!18.03!TCF4;;chr17:70117153..70117174,+!p1@SOX9!1.21!152.85!SOX9;;chr12:24102576..24102623,-!p2@SOX5!1.21!15.17!SOX5;;chr13:95364784..95364806,-!p1@SOX21!1.21!15.17!SOX21;;chr4:57522598..57522664,-!p3@HOPX!1.19!14.60!HOPX;;chr1:23696348..23696363,-!p4@ZNF436!1.18!16.03!ZNF436;;chr12:103351444..103351461,+!p1@ASCL1!1.18!14.03!ASCL1;;chr7:42276787..42276815,-!p1@GLI3!1.15!35.21!GLI3;;chr5:92918919..92918942,+!p1@NR2F1!1.14!56.96!NR2F1;;chr15:37392094..37392116,-!p6@MEIS2!1.13!15.46!MEIS2;;chr3:114173654..114173696,-!p12@ZBTB20!1.13!12.59!ZBTB20;;chr14:33403779..33403793,+!p6@NPAS3!1.13!12.59!NPAS3;;chr15:80696703..80696754,+!p1@ARNT2!1.12!16.32!ARNT2;;chr16:51185318..51185348,-!p2@SALL1!1.12!12.31!SALL1;;chr8:80679993..80680011,-!p1@HEY1!1.09!16.60!HEY1;;chr1:50889103..50889145,-!p1@DMRTA2!1.07!10.88!DMRTA2;;chr11:31832807..31832823,-!p4@PAX6!1.07!10.88!PAX6;;chr2:105470599..105470610,+!p@chr2:105470599..105470610,+!1.07!10.88!POU3F3;;chr9:4300050..4300118,-!p1@GLIS3!1.06!68.41!GLIS3;;chr6:108487220..108487236,+!p2@NR2E1!1.06!10.59!NR2E1;;chr4:57547820..57547829,-!p8@HOPX!1.05!10.30!HOPX;;chr1:151032922..151032951,+!p2@MLLT11!1.04!16.89!MLLT11;;chr8:60031682..60031710,-!p2@TOX!1.04!16.32!TOX;;chr12:106976678..106976708,+!p2@RFX4!1.04!10.02!RFX4;;chr21:34442439..34442455,+!p1@OLIG1!1.03!9.73!OLIG1;;chr4:57522166..57522260,-!p2@HOPX!1.02!10.88!HOPX;;chr18:42260920..42260951,+!p4@SETBP1!1.02!9.45!SETBP1;;chr10:119302268..119302282,+!p4@EMX2!1.02!9.45!EMX2;;chr14:29236301..29236317,+!p5@FOXG1!1.01!9.16!FOXG1;;chr2:105470614..105470625,+!p@chr2:105470614..105470625,+!1.01!9.16!POU3F3;;chr2:5832493..5832507,+!p2@SOX11!1.01!9.16!SOX11;;chr12:24715376..24715432,-!p1@SOX5!0.99!11.16!SOX5;;chr11:31827535..31827565,-!p11@PAX6!0.99!8.87!PAX6;;chr2:16080659..16080685,+!p1@MYCN!0.99!8.87!MYCN;;chr8:77593474..77593612,+!p1@ZFHX4!0.98!36.92!ZFHX4;;chr2:239148671..239148686,-!p1@HES6!0.98!32.34!HES6;;chr8:86089417..86089440,+!p2@E2F5!0.98!17.17!E2F5;;chr3:114173720..114173794,-!p6@ZBTB20!0.98!8.59!ZBTB20;;chr3:25469815..25469866,+!p3@RARB!0.98!8.59!RARB;;chr5:176738887..176738934,-!p1@MXD3!0.97!56.96!MXD3;;chr9:14314131..14314147,-!p2@NFIB!0.97!48.09!NFIB;;chr7:42276822..42276895,-!p2@GLI3!0.97!25.76!GLI3;;chr8:60031762..60031803,-!p3@TOX!0.97!12.31!TOX;;chr7:42192092..42192108,-!p13@GLI3!0.95!8.01!GLI3;;chr21:34398234..34398250,+!p1@OLIG2!0.95!8.01!OLIG2;;chr3:21792682..21792720,-!p1@ZNF385D!0.95!8.01!ZNF385D;;chr1:23696308..23696339,-!p2@ZNF436!0.94!16.89!ZNF436;;chrX:84498989..84499003,+!p1@ZNF711!0.94!10.59!ZNF711;;chr7:42192043..42192057,-!p10@GLI3!0.94!7.73!GLI3;;chr13:100623375..100623425,-!p1@ZIC5!0.94!7.73!ZIC5;;chr8:60031809..60031835,-!p4@TOX!0.93!9.73!TOX;;chr11:31832687..31832704,-!p6@PAX6!0.93!7.44!PAX6;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+|fantom_cat=http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000127;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000133;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0000221;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002319;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/CL:0002605;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000955;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0000956;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001016;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001890;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0001893;;http://fantom.gsc.riken.jp/5/suppl/Hon_et_al_2016/vis/#/ontologies/UBERON:0003528
 |ffid_belonging_in_development=CL:0000133,CL:0000339,CL:0000221
 |fonse_cell_line=

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FF:11235-116D2: Difference between revisions

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Revision as of 14:55, 15 May 2017

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	Mozilla Cavendish skin modified by DaSch for the Web Community Wiki GitHub project page – Report a bug – Skin version: 2.6.0