FFCP PHASE2:Mm9::chr3:84024775..84024818,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p1@Trim2 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Trim2_5end |
| Coexpression cluster: | MCL_coexpression_mm9:1 |
| Association with transcript: | 0bp_to_ENSMUST00000107693, ENSMUST00000107695, ENSMUST00000136651, ENSMUST00000137596, ENSMUST00000140856, ENSMUST00000154152, NM_030706, uc008pqa.2, uc008pqb.2, uc012cqx.1_5end |
| EntrezGene: | Trim2 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Trim2 |
|---|
0
20
40
60
80
100
120
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ectodermal cell | 5.07e-14 | 44 |
| neurectodermal cell | 5.07e-14 | 44 |
| CNS neuron (sensu Vertebrata) | 5.36e-14 | 23 |
| neuroblast (sensu Vertebrata) | 5.36e-14 | 23 |
| neural cell | 7.32e-14 | 43 |
| neuron | 1.18e-13 | 33 |
| neuronal stem cell | 1.18e-13 | 33 |
| neuroblast | 1.18e-13 | 33 |
| electrically signaling cell | 1.18e-13 | 33 |
| electrically responsive cell | 1.57e-13 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 2.12e-31 | 75 |
| central nervous system | 2.68e-31 | 73 |
| neurectoderm | 5.81e-30 | 64 |
| neural plate | 5.81e-30 | 64 |
| presumptive neural plate | 5.81e-30 | 64 |
| ectoderm-derived structure | 8.69e-30 | 95 |
| ectoderm | 8.69e-30 | 95 |
| presumptive ectoderm | 8.69e-30 | 95 |
| regional part of nervous system | 3.64e-27 | 54 |
| ecto-epithelium | 4.75e-26 | 73 |
Showing 1 to 10 of 36 entries
