Coexpression cluster:C4269: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
| Line 5: | Line 5: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0007023! | |ontology_enrichment_uberon=UBERON:0007023!9.76e-47!114;UBERON:0001049!1.92e-37!56;UBERON:0005068!1.92e-37!56;UBERON:0006241!1.92e-37!56;UBERON:0007135!1.92e-37!56;UBERON:0001017!2.90e-36!81;UBERON:0000073!3.41e-35!53;UBERON:0002616!3.41e-35!53;UBERON:0000955!7.34e-33!68;UBERON:0006238!7.34e-33!68;UBERON:0001016!1.12e-32!89;UBERON:0002780!8.62e-29!41;UBERON:0001890!8.62e-29!41;UBERON:0003080!8.62e-29!41;UBERON:0006240!8.62e-29!41;UBERON:0002346!2.65e-28!86;UBERON:0003075!2.80e-27!82;UBERON:0007284!2.80e-27!82;UBERON:0001893!2.54e-23!34;UBERON:0003528!3.83e-23!34;UBERON:0002020!3.83e-23!34;UBERON:0001869!4.26e-22!32;UBERON:0002791!5.06e-22!32;UBERON:0011216!9.70e-21!223;UBERON:0003056!2.40e-19!61;UBERON:0010371!1.03e-17!104;UBERON:0000956!2.58e-17!25;UBERON:0000203!2.58e-17!25;UBERON:0004121!5.88e-17!171;UBERON:0000924!5.88e-17!171;UBERON:0006601!5.88e-17!171;UBERON:0010314!8.38e-17!132;UBERON:0002619!4.47e-16!22;UBERON:0001950!1.08e-14!20;UBERON:0000477!5.47e-14!373;UBERON:0003076!1.11e-09!15;UBERON:0003057!1.11e-09!15;UBERON:0000025!1.66e-09!192;UBERON:0004111!3.56e-09!240;UBERON:0000481!4.07e-09!342;UBERON:0002420!1.07e-07!9;UBERON:0007245!1.07e-07!9;UBERON:0010009!1.07e-07!9;UBERON:0010011!1.07e-07!9;UBERON:0000454!1.07e-07!9;UBERON:0004733!1.29e-07!12;UBERON:0002028!1.29e-07!12;UBERON:0007277!1.29e-07!12;UBERON:0000125!2.83e-07!9;UBERON:0002308!2.83e-07!9;UBERON:0001894!6.61e-07!7;UBERON:0006222!6.61e-07!7 | ||
|tf_chipseq_enrich=FOXA1#3169;3:11.0814197493855:0.00073475527569867:0.00582665954735712!FOXA2#3170;3:24.6304637526652:6.68983856509345e-05:0.00107456175007658!JUND#3727;3:6.99466394187103:0.00292184504273499:0.015716655048321!RAD21#5885;3:10.3550338954563:0.000900491207356542:0.00666145354902322!TRIM28#10155;3:18.5905250452625:0.000155596929725528:0.00197525072852855!YY1#7528;3:4.91117074985386:0.00844145534180826:0.0330317405186629!ZZZ3#26009;3:239.413212435233:7.25894005043406e-08:4.37964436699759e-06 | |tf_chipseq_enrich=FOXA1#3169;3:11.0814197493855:0.00073475527569867:0.00582665954735712!FOXA2#3170;3:24.6304637526652:6.68983856509345e-05:0.00107456175007658!JUND#3727;3:6.99466394187103:0.00292184504273499:0.015716655048321!RAD21#5885;3:10.3550338954563:0.000900491207356542:0.00666145354902322!TRIM28#10155;3:18.5905250452625:0.000155596929725528:0.00197525072852855!YY1#7528;3:4.91117074985386:0.00844145534180826:0.0330317405186629!ZZZ3#26009;3:239.413212435233:7.25894005043406e-08:4.37964436699759e-06 | ||
|tfbs_overrepresentation=0.147255,0.0586687,7.71129e-12,0.00115693,3.8056e-06,0.287811,0.0430074,3.28139e-10,0.03272,0.0257057,1.87877e-05,0.225367,6.75532e-05,0.00829112,0.148679,6.60069e-07,0.010441,0.0982016,0.0528514,0.00606063,0.00130254,0.132577,3.5527e-08,3.80297e-06,1.23595e-05,0.00198832,0.0236364,0.00424558,0.143747,0.0933697,0.204953,1.96157e-07,9.90484e-07,0.000102831,0.0665252,0.00367271,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.00030538,0.140039,6.05714e-11,0.00762432,0.0362416,0.0380166,0.18151,7.34609e-06,0.121201,0.154071,0.0541794,0.0701653,6.80691e-08,3.70634e-06,0.0384161,0.107455,0.00190755,0.0783235,0.105572,0.0294301,0.0117644,0.108602,0.0759481,0.054569,2.56901e-11,4.43499e-11,0.0600088,0.0860723,0.167053,0.000137668,0.067678,0.089036,0.00742795,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.000156996,3.23857e-07,0.000916199,0.114846,0.00526876,0.000234347,0.064341,0.00180443,5.63916e-05,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,8.28205e-12,0.00027757,5.66841e-22,0.153631,0.00444039,7.34907e-11,0.0574857,1.20247e-06,0.00053249,0.0370665,2.57091e-07,0.0409286,0.0669887,4.81991e-06,0.144217,0.0400492,0.0177901,0.0339971,8.12411e-07,0.0176855,0.005305,0.0337525,0.0203386,0.0566549,0.139021,0.00361707,1.44468e-06,2.00583e-37,0.0103109,0.0857827,0.102368,0.0166632,0.00424238,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,1.48231e-10,0.155998,0.230347,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.0015841,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.00239446,0.0516985,0.0337251,0.0281563,0.0952829,0.00708381,0.147788,5.10052e-08,0.114283,0.0400322,3.4926e-07,0.0403542,1.11094e-14,0.179689,0.137725,0.0255071,3.82394e-07,9.05385e-05,0.000130634,1.45869e-08,0.0176328,0.178449,0.0356339,0.0133424,0.00782633,0.0274061,0.000281667,0.0737247,0.118847,5.92269e-05,0.0401756,2.17749e-06,4.72645e-05,6.27895e-06,0.0187509,0.000341043,7.95188e-06,7.73357e-06,0.0470731,0.00314485,0.0602859,5.43543e-05,1.60045e-07,0.0893019,0.00186183,0.0308319,0.0606036,0.136451,1.25168e-12,2.03453e-09,5.64763e-10,0.00173038,0.0010913,0.0458667,0.00564514,0.0076549,7.79897e-06,6.92714e-09,0.0151713,0.0142864,0.100942,0.062995,0.000197284,2.0244e-05,2.10342e-34,0.000717242,0.161026,0.0738599,0.00837667,0.000497929,0.085973,3.85687e-05,0.059896,0.569726,0.384785,0.0418404,7.91615e-05,0.0959204,0.0931946,0.0472272,1.03243e-15,0.163502,0.0019681,7.81746e-08,0.348993,0.0983991,0.000101961,0.000287051,0.136838,0.0034161,0.111647,1.71616e-16,0.117027,0.0133783,0.185164,0.00124042,0.00497001,0.0980899,0.159674,0.00022351,1.50466e-07,0.0024791,1.83669e-10,0.0619218,0.1751,0.163376,8.52993e-22,0.0345133,9.45368e-05,0.0811639,0.0920653,0.118078,0.0755168,3.24228e-38,0.063292,6.98499e-07,0.119261,0.0865903,0.0380459,1.41017e-05,2.64054e-38,8.06711e-11,0.000191546,5.72791e-32,1.96948e-08,3.14923e-17,9.12427e-06,0.0083957,1.06235e-06,0.000276652,0.446302,6.47734e-07,0.309233,8.61631e-23,0.0619618,0.395854,7.25327e-13,4.15274e-11,0.0164332,2.06255e-05,0.00531795,0.0964816,5.20613e-16,3.66238e-07,0.0643874,0.187251,0.0109219,0.181715,0.0186051,0.00628346,0.330894,2.51299e-07,0.0190732,0.0821552,4.73835e-05,1.53412e-08,3.388e-11,0.520763,8.24279e-11,0.0173702,1.76145e-21,0.000241502,2.27741e-05,5.00123e-09,0.141124,7.86825e-09,0.0270783,0.503224,1.31737e-28,7.49522e-17,0.0557438,2.22334e-09,0.00529148,7.07074e-24,0.00192508,0.416816,0.000455917,0.0280875,1.87619e-07,0.0807167,0.056723,4.12483e-10,0.017744,6.2972e-11,0.0020109,0.161148,2.21028e-05,0.236471,1.48948e-12,0.00934251,8.63836e-42,1.05674e-06,0.0772647,0.155555,6.03718e-14,1.24796e-05,0.248634,9.68357e-11,0.135034,3.82133e-08,0.0670502,0.0730934,0.184794,2.84016e-10,2.186e-26,3.83059e-06,6.63596e-13,6.06222e-15,1.93954e-05,1.4664e-08,1.49455e-08,0.218623,2.80973e-06,3.3357e-12,1.5832e-05,0.00286634,0.229003,1.4525e-05,0.0129683,3.98833e-09,0.0054714,4.33518e-14,5.45446e-06,0.00514398,1.0591e-08,2.73928e-05,1.25716e-06,1.08769e-17,0.00262586,0.000152311,0.00847033,4.10714e-09,3.03667e-05,4.42955e-13,0.0182254,4.92595e-07,1.77925e-06,1.12737e-05,0.0488795,2.62112e-07,0.144809,0.0005766,5.85946e-12,0.0818086,0.447325,3.90686e-06,2.6981e-08,0.152681,0.00110167,0.00985947,0.259235,0.00952201,9.20626e-08,1.91856e-05,3.89289e-09,2.91607e-09,0.343734,0.306556,0.0524121,0.0144637,3.32652e-18,6.93841e-09,7.00612e-08,0.00375279,2.58964e-08,0.226257,5.14335e-13,3.54024e-10,8.05867e-06,3.32959e-07,3.87034e-19,0.00172833,5.79514e-31,8.75824e-26,3.06818e-05,1.75869e-09,1.49418e-08,1.49534e-08,6.63033e-17,0.000531138,0.455379,1.21271e-05,0.159617,1.79171e-11,0.000124053,0.0293409,1.82151e-12,0.000126488,0.0595618,9.2253e-18,8.13171e-16,0.000983703,1.06976e-08,0.00101759,0.475069,0.0158269,0.0204872,0.630264,0.00689935,5.97226e-05,0.00157993,0.192544,0.0779981,0.0575676,0.000561685,0.0270501,0.00166084,2.02556e-07,0.441735,3.26786e-09,0.00651205,2.9178e-05,0.0435386,0.000533557,0.000372475,1.63421e-05,0.10689,1.11988e-06,0.0627924,0.381386,0.0179103,0.303939,0.279795,5.75971e-08,0.0464827,0.169603,0.00683084,0.00566743,0.0899537,0.000116149,0.000772956,0.107111,0.0438639,0.00389058,0.000346732,0.129156,0.210369,0.0200986,1.02399e-26,0.0499762,0.0828956,0.0666953,0.0011669,7.34458e-06,0.219383,2.24815e-11,0.0205132,0.00915124,0.188694,0.0481795,0.199971,0.406014,0.127758,0.0164446,0.0181729,4.24693e-05,0.0876426,0.0952322,0.0112557,0.0268081,0.107043,1.09061e-18,0.00481323,0.173708,0.141119,0.00187586,0.0300692,0.000420877,0.00100623,0.052362,4.84185e-06,0.153187,0.00327141,0.00490751,0.160149,1.1334e-05,0.000133184,3.02301e-05,0.00477066,0.517717,5.18464e-07,0.0145999,0.0656973,0.211746,0.026334,3.16353e-08,0.0757897,1.23251e-06,0.193215,0.0549034,0.0779715,0.0561838,1.2533e-05,0.0345419,0.0388736,0.0355977,3.1019e-11,1.465e-07,2.53049e-09,0.016278,0.370421,0.0330727,0.348757,6.34879e-06,0.0394698,0.0596469,0.000251928,0.00782667,0.108872,0.00628729,0.26144,0.0286025,0.00896808,0.144567,0.038848,0.000119282,0.0015426,6.67052e-07,0.253693,0.00203513,0.190048,0.00899422,0.00176415,0.0306378,0.286988,0.0761239,4.60407e-05,0.0818785,0.00117737,0.0637246,7.60637e-07,0.141463,0.000891578,0.140622,0.0889592,0.309588,0.00502301,0.0473033,0.094881,0.022113,0.132886,0.0774373,0.109194,0.128564,0.00904548,0.00681584,0.000381649,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.000558687,0.0340203,0.00282206,0.000356768,0.0122266,3.05988e-34,0.21727,0.00514993,0.119215,0.00138836,2.04673e-06,0.0465298,0.057571,0.047591,0.392974,0.00189135,0.00103374,0.300597,0.0713214,2.25922e-18,0.291114,0.0355833,0.000364559,0.0163112,0.000919297,0.936279,9.90933e-05,2.68619e-10,0.00608582,5.36187e-05,0.000233345,0.0494066,0.0958493,0.0227848,0.0755808,0.00105838,0.00631005,0.070276,0.000146823,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.00259914,7.75285e-05,0.0457643,1.11923e-22,0.0203723,0.218271,4.65809e-15,2.81467e-22,0.172982,3.02049e-07,0.000654973,0.00200641,0.0195983,0.148574,0.504592,0.0128248,1.81008e-08,0.000138924,0.0602373,0.0109522,0.000642001,0.00490354,0.15503,0.170295,0.193653,0.00987736,0.228144,0.00326415,0.0050797,9.71384e-06,0.0838874,0.00806892,0.113145,0.112651,2.64043e-06,1.61941e-09,0.000153071,1.75125e-05,0.000223227,0.000516956,4.6766e-06,0.00352872,0.103667,0.000263206,0.025556,0.000902392,0.09066,2.73611e-15,0.166967,0.188651,0.0813902,0.184948,7.30641e-17,0.311847,0.511859,0.0590944,0.00309372,0.00109188,0.218229,0.00248603,1.82007e-05,0.0170505,8.04897e-06,0.000227331,0.131093,0.0434602,0.133616,0.103051,0.36927,0.120614,0.407369,0.00249898,5.70628e-11,1.87635e-07,8.04928e-11,2.54143e-05,2.31879e-07,0.197484,0.396996,7.71389e-06,0.0966095,0.0129,0.580441,0.0863135,0.0198622,1.22387e-09,0.00168795,0.48809,8.43155e-06,0.0217093,2.84873e-11,0.3468,0.60734,0.00235168,0.166658,6.7887e-09,0.00161115,1.09751e-13,0.00583062,3.1522e-17,1.22274e-06,0.00513616,0.00084117,0.000461108,0.287881,0.0556235,2.07035e-09,2.69727e-07,0.468444,0.258219,4.5296e-11,1.52352e-19,8.44761e-10,0.000165723,1.40974e-06,1.01659e-14,0.000800088,3.19196e-10,0.0868402,6.5727e-07,1.94637e-09,0.0120582,1.13245e-09,0.477353,0.00492096,1.40958e-05,0.000852086,0.20342,0.200493,0.20558,0.00583368,0.25656,0.107337,0.349197,0.0131573,0.156104,1.52473e-08,3.02977e-10,0.0961477,0.055627,6.76256e-06,0.163828,0.0289012,0.120226,0.00486063,0.0513026,0.00677385,0.00115141,0.0442318,0.00465874,0.616388,0.408413,0.516511,0.0073454,0.656109,0.00873429,6.70755e-06,0.387276,0.00100024,0.802166,1.56204e-06,0.222037,4.61256e-20,1.43422e-18,0.0252635,1.39925e-06,0.215157,0.204817,1.67324e-08,0.138871,0.00583733,0.166905,0.19783,0.0833851,1.35213e-14,3.40542e-08,4.91849e-05,8.28052e-13,0.373557,0.00701509,0.000216517,0.0768488,0.534741,0.0889149,0.363192,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.000640194,0.00618487,0.241132,0.000122364,0.30666,0.303709,0.0323359,0.386538,8.48983e-07,0.250964,0.383276,2.84796e-07,0.0344603,0.00213139,0.000843922,0.196976,0.191517,0.129584,0.000387553,0.307334,0.0246928,1.75683e-18,0.563586,5.01908e-06,4.07642e-09,0.273281,0.0780405,2.31469e-20,4.97621e-08,0.000564944,0.359231,0.339729,0.197805,0.608187,0.387069,2.48021e-17,0.173874,4.71775e-09,0.00375452,0.205413,0.00105378,0.0779009,0.276869,0.00170381,0.0337138,0.18966,0.258854,0.188263,0.00265057,0.264884,0.00081525,0.19104,0.163057,0.219428,0.00177656,0.0900729,0.0953646,0.000872573,0.0348699,0.378361,7.12232e-07,5.9648e-09,0.447185,0.179412,0.193601,0.220904,0.0269454,0.341681,0.310674,0.00206345,0.198614,0.186804,0.00793786,0.00155473,0.0325925,0.0933115,0.000350724,5.50236e-05,0.226869,0.27872,0.000111542,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.0111711,0.229428,0.0139199,0.00241368,0.000916623,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.0701861,0.000701257,1.01156e-05,0.000172898,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.00113527,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.00371613,0.203781,0.21382,0.207559,0.141867,0.193031,0.00316602,0.115972,0.0022686,0.0030448,0.173026,0.00157872,0.0102599,0.197112,0.240478,0.156465,0.13108,0.256963,0.00221189,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.00206803,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.000840685,0.0537355,0.319922,0.261724,0.00186843,0.187731,0.233626,0.189559,0.0812887,0.000169901,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.000236163,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,8.23371e-05,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.00335066,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,1.38202e-07,0.28689,0.236464,0.325148,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,1.13913e-08,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.000119654,0.252796,0.205954,7.71155e-06 | |tfbs_overrepresentation=0.147255,0.0586687,7.71129e-12,0.00115693,3.8056e-06,0.287811,0.0430074,3.28139e-10,0.03272,0.0257057,1.87877e-05,0.225367,6.75532e-05,0.00829112,0.148679,6.60069e-07,0.010441,0.0982016,0.0528514,0.00606063,0.00130254,0.132577,3.5527e-08,3.80297e-06,1.23595e-05,0.00198832,0.0236364,0.00424558,0.143747,0.0933697,0.204953,1.96157e-07,9.90484e-07,0.000102831,0.0665252,0.00367271,0.688181,0.0429682,0.120351,0.0667043,0.0964797,0.00030538,0.140039,6.05714e-11,0.00762432,0.0362416,0.0380166,0.18151,7.34609e-06,0.121201,0.154071,0.0541794,0.0701653,6.80691e-08,3.70634e-06,0.0384161,0.107455,0.00190755,0.0783235,0.105572,0.0294301,0.0117644,0.108602,0.0759481,0.054569,2.56901e-11,4.43499e-11,0.0600088,0.0860723,0.167053,0.000137668,0.067678,0.089036,0.00742795,0.00747605,0.0171177,0.0964936,0.0436945,0.0372495,0.00725252,0.000156996,3.23857e-07,0.000916199,0.114846,0.00526876,0.000234347,0.064341,0.00180443,5.63916e-05,0.062747,0.0857568,0.0495878,0.0953825,0.0473737,8.28205e-12,0.00027757,5.66841e-22,0.153631,0.00444039,7.34907e-11,0.0574857,1.20247e-06,0.00053249,0.0370665,2.57091e-07,0.0409286,0.0669887,4.81991e-06,0.144217,0.0400492,0.0177901,0.0339971,8.12411e-07,0.0176855,0.005305,0.0337525,0.0203386,0.0566549,0.139021,0.00361707,1.44468e-06,2.00583e-37,0.0103109,0.0857827,0.102368,0.0166632,0.00424238,0.0147934,0.0843604,0.134932,0.0595773,0.0748346,0.0572164,0.0227861,0.125792,0.108101,0.0648644,0.0553359,0.0330399,0.00395526,0.022776,0.127606,1.48231e-10,0.155998,0.230347,0.0693171,0.0988228,0.0842275,0.0389418,0.120833,0.0015841,0.143677,0.180712,0.0265818,0.0427088,0.117549,0.0747594,0.00239446,0.0516985,0.0337251,0.0281563,0.0952829,0.00708381,0.147788,5.10052e-08,0.114283,0.0400322,3.4926e-07,0.0403542,1.11094e-14,0.179689,0.137725,0.0255071,3.82394e-07,9.05385e-05,0.000130634,1.45869e-08,0.0176328,0.178449,0.0356339,0.0133424,0.00782633,0.0274061,0.000281667,0.0737247,0.118847,5.92269e-05,0.0401756,2.17749e-06,4.72645e-05,6.27895e-06,0.0187509,0.000341043,7.95188e-06,7.73357e-06,0.0470731,0.00314485,0.0602859,5.43543e-05,1.60045e-07,0.0893019,0.00186183,0.0308319,0.0606036,0.136451,1.25168e-12,2.03453e-09,5.64763e-10,0.00173038,0.0010913,0.0458667,0.00564514,0.0076549,7.79897e-06,6.92714e-09,0.0151713,0.0142864,0.100942,0.062995,0.000197284,2.0244e-05,2.10342e-34,0.000717242,0.161026,0.0738599,0.00837667,0.000497929,0.085973,3.85687e-05,0.059896,0.569726,0.384785,0.0418404,7.91615e-05,0.0959204,0.0931946,0.0472272,1.03243e-15,0.163502,0.0019681,7.81746e-08,0.348993,0.0983991,0.000101961,0.000287051,0.136838,0.0034161,0.111647,1.71616e-16,0.117027,0.0133783,0.185164,0.00124042,0.00497001,0.0980899,0.159674,0.00022351,1.50466e-07,0.0024791,1.83669e-10,0.0619218,0.1751,0.163376,8.52993e-22,0.0345133,9.45368e-05,0.0811639,0.0920653,0.118078,0.0755168,3.24228e-38,0.063292,6.98499e-07,0.119261,0.0865903,0.0380459,1.41017e-05,2.64054e-38,8.06711e-11,0.000191546,5.72791e-32,1.96948e-08,3.14923e-17,9.12427e-06,0.0083957,1.06235e-06,0.000276652,0.446302,6.47734e-07,0.309233,8.61631e-23,0.0619618,0.395854,7.25327e-13,4.15274e-11,0.0164332,2.06255e-05,0.00531795,0.0964816,5.20613e-16,3.66238e-07,0.0643874,0.187251,0.0109219,0.181715,0.0186051,0.00628346,0.330894,2.51299e-07,0.0190732,0.0821552,4.73835e-05,1.53412e-08,3.388e-11,0.520763,8.24279e-11,0.0173702,1.76145e-21,0.000241502,2.27741e-05,5.00123e-09,0.141124,7.86825e-09,0.0270783,0.503224,1.31737e-28,7.49522e-17,0.0557438,2.22334e-09,0.00529148,7.07074e-24,0.00192508,0.416816,0.000455917,0.0280875,1.87619e-07,0.0807167,0.056723,4.12483e-10,0.017744,6.2972e-11,0.0020109,0.161148,2.21028e-05,0.236471,1.48948e-12,0.00934251,8.63836e-42,1.05674e-06,0.0772647,0.155555,6.03718e-14,1.24796e-05,0.248634,9.68357e-11,0.135034,3.82133e-08,0.0670502,0.0730934,0.184794,2.84016e-10,2.186e-26,3.83059e-06,6.63596e-13,6.06222e-15,1.93954e-05,1.4664e-08,1.49455e-08,0.218623,2.80973e-06,3.3357e-12,1.5832e-05,0.00286634,0.229003,1.4525e-05,0.0129683,3.98833e-09,0.0054714,4.33518e-14,5.45446e-06,0.00514398,1.0591e-08,2.73928e-05,1.25716e-06,1.08769e-17,0.00262586,0.000152311,0.00847033,4.10714e-09,3.03667e-05,4.42955e-13,0.0182254,4.92595e-07,1.77925e-06,1.12737e-05,0.0488795,2.62112e-07,0.144809,0.0005766,5.85946e-12,0.0818086,0.447325,3.90686e-06,2.6981e-08,0.152681,0.00110167,0.00985947,0.259235,0.00952201,9.20626e-08,1.91856e-05,3.89289e-09,2.91607e-09,0.343734,0.306556,0.0524121,0.0144637,3.32652e-18,6.93841e-09,7.00612e-08,0.00375279,2.58964e-08,0.226257,5.14335e-13,3.54024e-10,8.05867e-06,3.32959e-07,3.87034e-19,0.00172833,5.79514e-31,8.75824e-26,3.06818e-05,1.75869e-09,1.49418e-08,1.49534e-08,6.63033e-17,0.000531138,0.455379,1.21271e-05,0.159617,1.79171e-11,0.000124053,0.0293409,1.82151e-12,0.000126488,0.0595618,9.2253e-18,8.13171e-16,0.000983703,1.06976e-08,0.00101759,0.475069,0.0158269,0.0204872,0.630264,0.00689935,5.97226e-05,0.00157993,0.192544,0.0779981,0.0575676,0.000561685,0.0270501,0.00166084,2.02556e-07,0.441735,3.26786e-09,0.00651205,2.9178e-05,0.0435386,0.000533557,0.000372475,1.63421e-05,0.10689,1.11988e-06,0.0627924,0.381386,0.0179103,0.303939,0.279795,5.75971e-08,0.0464827,0.169603,0.00683084,0.00566743,0.0899537,0.000116149,0.000772956,0.107111,0.0438639,0.00389058,0.000346732,0.129156,0.210369,0.0200986,1.02399e-26,0.0499762,0.0828956,0.0666953,0.0011669,7.34458e-06,0.219383,2.24815e-11,0.0205132,0.00915124,0.188694,0.0481795,0.199971,0.406014,0.127758,0.0164446,0.0181729,4.24693e-05,0.0876426,0.0952322,0.0112557,0.0268081,0.107043,1.09061e-18,0.00481323,0.173708,0.141119,0.00187586,0.0300692,0.000420877,0.00100623,0.052362,4.84185e-06,0.153187,0.00327141,0.00490751,0.160149,1.1334e-05,0.000133184,3.02301e-05,0.00477066,0.517717,5.18464e-07,0.0145999,0.0656973,0.211746,0.026334,3.16353e-08,0.0757897,1.23251e-06,0.193215,0.0549034,0.0779715,0.0561838,1.2533e-05,0.0345419,0.0388736,0.0355977,3.1019e-11,1.465e-07,2.53049e-09,0.016278,0.370421,0.0330727,0.348757,6.34879e-06,0.0394698,0.0596469,0.000251928,0.00782667,0.108872,0.00628729,0.26144,0.0286025,0.00896808,0.144567,0.038848,0.000119282,0.0015426,6.67052e-07,0.253693,0.00203513,0.190048,0.00899422,0.00176415,0.0306378,0.286988,0.0761239,4.60407e-05,0.0818785,0.00117737,0.0637246,7.60637e-07,0.141463,0.000891578,0.140622,0.0889592,0.309588,0.00502301,0.0473033,0.094881,0.022113,0.132886,0.0774373,0.109194,0.128564,0.00904548,0.00681584,0.000381649,0.051838,0.0993999,0.0500365,0.061829,0.0755121,0.0936516,0.000558687,0.0340203,0.00282206,0.000356768,0.0122266,3.05988e-34,0.21727,0.00514993,0.119215,0.00138836,2.04673e-06,0.0465298,0.057571,0.047591,0.392974,0.00189135,0.00103374,0.300597,0.0713214,2.25922e-18,0.291114,0.0355833,0.000364559,0.0163112,0.000919297,0.936279,9.90933e-05,2.68619e-10,0.00608582,5.36187e-05,0.000233345,0.0494066,0.0958493,0.0227848,0.0755808,0.00105838,0.00631005,0.070276,0.000146823,0.153469,0.0376916,0.13262,0.0450031,0.0539144,0.114242,0.0929549,0.172425,0.104948,0.221645,0.057168,0.00259914,7.75285e-05,0.0457643,1.11923e-22,0.0203723,0.218271,4.65809e-15,2.81467e-22,0.172982,3.02049e-07,0.000654973,0.00200641,0.0195983,0.148574,0.504592,0.0128248,1.81008e-08,0.000138924,0.0602373,0.0109522,0.000642001,0.00490354,0.15503,0.170295,0.193653,0.00987736,0.228144,0.00326415,0.0050797,9.71384e-06,0.0838874,0.00806892,0.113145,0.112651,2.64043e-06,1.61941e-09,0.000153071,1.75125e-05,0.000223227,0.000516956,4.6766e-06,0.00352872,0.103667,0.000263206,0.025556,0.000902392,0.09066,2.73611e-15,0.166967,0.188651,0.0813902,0.184948,7.30641e-17,0.311847,0.511859,0.0590944,0.00309372,0.00109188,0.218229,0.00248603,1.82007e-05,0.0170505,8.04897e-06,0.000227331,0.131093,0.0434602,0.133616,0.103051,0.36927,0.120614,0.407369,0.00249898,5.70628e-11,1.87635e-07,8.04928e-11,2.54143e-05,2.31879e-07,0.197484,0.396996,7.71389e-06,0.0966095,0.0129,0.580441,0.0863135,0.0198622,1.22387e-09,0.00168795,0.48809,8.43155e-06,0.0217093,2.84873e-11,0.3468,0.60734,0.00235168,0.166658,6.7887e-09,0.00161115,1.09751e-13,0.00583062,3.1522e-17,1.22274e-06,0.00513616,0.00084117,0.000461108,0.287881,0.0556235,2.07035e-09,2.69727e-07,0.468444,0.258219,4.5296e-11,1.52352e-19,8.44761e-10,0.000165723,1.40974e-06,1.01659e-14,0.000800088,3.19196e-10,0.0868402,6.5727e-07,1.94637e-09,0.0120582,1.13245e-09,0.477353,0.00492096,1.40958e-05,0.000852086,0.20342,0.200493,0.20558,0.00583368,0.25656,0.107337,0.349197,0.0131573,0.156104,1.52473e-08,3.02977e-10,0.0961477,0.055627,6.76256e-06,0.163828,0.0289012,0.120226,0.00486063,0.0513026,0.00677385,0.00115141,0.0442318,0.00465874,0.616388,0.408413,0.516511,0.0073454,0.656109,0.00873429,6.70755e-06,0.387276,0.00100024,0.802166,1.56204e-06,0.222037,4.61256e-20,1.43422e-18,0.0252635,1.39925e-06,0.215157,0.204817,1.67324e-08,0.138871,0.00583733,0.166905,0.19783,0.0833851,1.35213e-14,3.40542e-08,4.91849e-05,8.28052e-13,0.373557,0.00701509,0.000216517,0.0768488,0.534741,0.0889149,0.363192,0.236011,0.203486,0.273398,0.375787,0.4466,0.351067,0.275347,0.000640194,0.00618487,0.241132,0.000122364,0.30666,0.303709,0.0323359,0.386538,8.48983e-07,0.250964,0.383276,2.84796e-07,0.0344603,0.00213139,0.000843922,0.196976,0.191517,0.129584,0.000387553,0.307334,0.0246928,1.75683e-18,0.563586,5.01908e-06,4.07642e-09,0.273281,0.0780405,2.31469e-20,4.97621e-08,0.000564944,0.359231,0.339729,0.197805,0.608187,0.387069,2.48021e-17,0.173874,4.71775e-09,0.00375452,0.205413,0.00105378,0.0779009,0.276869,0.00170381,0.0337138,0.18966,0.258854,0.188263,0.00265057,0.264884,0.00081525,0.19104,0.163057,0.219428,0.00177656,0.0900729,0.0953646,0.000872573,0.0348699,0.378361,7.12232e-07,5.9648e-09,0.447185,0.179412,0.193601,0.220904,0.0269454,0.341681,0.310674,0.00206345,0.198614,0.186804,0.00793786,0.00155473,0.0325925,0.0933115,0.000350724,5.50236e-05,0.226869,0.27872,0.000111542,0.131118,0.20837,0.247588,0.222339,0.0673329,0.20847,0.266544,0.113092,0.0111711,0.229428,0.0139199,0.00241368,0.000916623,0.0384949,0.0660995,0.0521984,0.0455518,0.268741,0.201602,0.0701861,0.000701257,1.01156e-05,0.000172898,0.108462,0.0595618,0.21593,0.158479,0.220319,0.195218,0.124213,0.259632,0.30793,0.00113527,0.159884,0.257294,0.150733,0.217112,0.123917,0.184317,0.185335,0.0723291,0.258496,0.00371613,0.203781,0.21382,0.207559,0.141867,0.193031,0.00316602,0.115972,0.0022686,0.0030448,0.173026,0.00157872,0.0102599,0.197112,0.240478,0.156465,0.13108,0.256963,0.00221189,0.172134,0.176789,0.0969345,0.202137,0.310405,0.280943,0.00206803,0.0822373,0.202065,0.106739,0.0536053,0.0537737,0.15113,0.078016,0.000840685,0.0537355,0.319922,0.261724,0.00186843,0.187731,0.233626,0.189559,0.0812887,0.000169901,0.064145,0.121913,0.0638699,0.104603,0.0663259,0.0762523,0.128736,0.000236163,0.04411,0.066952,0.089609,0.0367455,0.13497,0.204393,0.295769,0.286691,8.23371e-05,0.141729,0.263159,0.255956,0.200105,0.227491,0.29837,0.00335066,0.177664,0.28365,0.264413,0.131761,0.160658,0.206239,1.38202e-07,0.28689,0.236464,0.325148,0.115817,0.218052,0.223831,0.11528,0.194982,0.190993,0.281727,0.283218,0.249955,0.164638,0.224257,0.0935776,0.327622,1.13913e-08,0.207791,0.0958756,0.0859274,0.316866,0.171683,0.158847,0.271275,0.071111,0.270604,0.101021,0.222548,0.175934,0.157274,0.000119654,0.252796,0.205954,7.71155e-06 | ||
}} | }} | ||
Revision as of 15:48, 19 October 2012
Full id: C4269_anaplastic_parietal_salivary_small_seminal_pineal_ductus
Phase1 CAGE Peaks
| Hg19::chr3:114819047..114819069,- | p16@ZBTB20 |
| Hg19::chr3:114819073..114819100,- | p10@ZBTB20 |
| Hg19::chr3:114819101..114819121,- | p7@ZBTB20 |
Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data
No results for this coexpression
Enriched Gene Ontology terms on this co-expression cluster<b>Summary:</b> Results for GOStat analysis on co-expressed clusters. Each cluster with promoters mapping to at least two different genes was analysed with GOStat (PMID: 14962934) with default parameter. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br>data
No GOStat results
Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>
Overrepresented TFBS (DNA) motifs on this co-expression cluster<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data
Novel motifs
JASPAR motifs
| Motifs | -log10(p-value) |
|---|---|
|
{{{tfbs_overrepresentation_jaspar}}} |
ENCODE TF ChIP-seq peak enrichment analysis<b>Summary:</b> For each TF and each co-expression cluster, the number of promoters with ENCODE TF ChIP signal was compared with the rest of promoters from the robust set using Fisher's exact test. Clusters with significant ChIP enrichment (q <= 0.05) after Benjamini-Hochberg correction were retained. <br><b>Analyst:</b> Erik Arner<br><br>link to source dataset<br><br>data
(#promoters = Number of promoters in this coexpression cluster that have ChIP signal of the TF)
| TF | #promoters | Enrichment | p-value | q-value |
|---|---|---|---|---|
| FOXA1#3169 | 3 | 11.0814197493855 | 0.00073475527569867 | 0.00582665954735712 |
| FOXA2#3170 | 3 | 24.6304637526652 | 6.68983856509345e-05 | 0.00107456175007658 |
| JUND#3727 | 3 | 6.99466394187103 | 0.00292184504273499 | 0.015716655048321 |
| RAD21#5885 | 3 | 10.3550338954563 | 0.000900491207356542 | 0.00666145354902322 |
| TRIM28#10155 | 3 | 18.5905250452625 | 0.000155596929725528 | 0.00197525072852855 |
| YY1#7528 | 3 | 4.91117074985386 | 0.00844145534180826 | 0.0330317405186629 |
| ZZZ3#26009 | 3 | 239.413212435233 | 7.25894005043406e-08 | 4.37964436699759e-06 |
Relative expression of the co-expression cluster<b>Summary:</b>Co-expression clusters are compared against FANTOM5 samples to obtain relative expression. <br><b>Analyst:</b>NA<br><br>link to data source<br> data
This analysis result is provided for C0 - C305 clusters.
