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FFCP PHASE1:Mm9::chr8:85689580..85689594,+: Difference between revisions

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|id=chr8:85689580..85689594,+
|id=chr8:85689580..85689594,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!4.30e-20!71;UBERON:0003075!4.30e-20!71;UBERON:0007284!4.30e-20!71;UBERON:0000033!6.51e-20!63;UBERON:0001049!1.26e-19!52;UBERON:0005068!1.26e-19!52;UBERON:0006241!1.26e-19!52;UBERON:0007135!1.26e-19!52;UBERON:0000073!1.01e-18!75;UBERON:0001016!1.01e-18!75;UBERON:0001017!9.53e-18!73;UBERON:0005743!9.53e-18!73;UBERON:0003056!1.05e-17!49;UBERON:0000955!2.49e-17!50;UBERON:0006238!2.49e-17!50;UBERON:0004121!3.64e-17!102;UBERON:0000924!3.64e-17!102;UBERON:0006601!3.64e-17!102;UBERON:0002616!1.25e-16!49;UBERON:0002020!1.89e-14!34;UBERON:0003080!4.75e-14!40;UBERON:0002780!2.07e-13!39;UBERON:0001890!2.07e-13!39;UBERON:0006240!2.07e-13!39;UBERON:0002791!6.78e-12!29;UBERON:0003528!6.78e-12!29;UBERON:0001893!6.78e-12!29;UBERON:0007811!4.47e-10!86;UBERON:0000153!5.28e-09!94;UBERON:0000956!8.39e-08!21;UBERON:0001869!8.39e-08!21;UBERON:0000203!8.39e-08!21;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10;UBERON:0002619!3.21e-07!17;UBERON:0004111!7.45e-07!122
|ontology_enrichment_uberon=UBERON:0002346!4.30e-20!71;UBERON:0003075!4.30e-20!71;UBERON:0007284!4.30e-20!71;UBERON:0000033!6.51e-20!63;UBERON:0001049!1.26e-19!52;UBERON:0005068!1.26e-19!52;UBERON:0006241!1.26e-19!52;UBERON:0007135!1.26e-19!52;UBERON:0000073!1.01e-18!75;UBERON:0001016!1.01e-18!75;UBERON:0001017!9.53e-18!73;UBERON:0005743!9.53e-18!73;UBERON:0003056!1.05e-17!49;UBERON:0000955!2.49e-17!50;UBERON:0006238!2.49e-17!50;UBERON:0004121!3.64e-17!102;UBERON:0000924!3.64e-17!102;UBERON:0006601!3.64e-17!102;UBERON:0002616!1.25e-16!49;UBERON:0002020!1.89e-14!34;UBERON:0003080!4.75e-14!40;UBERON:0002780!2.07e-13!39;UBERON:0001890!2.07e-13!39;UBERON:0006240!2.07e-13!39;UBERON:0002791!6.78e-12!29;UBERON:0003528!6.78e-12!29;UBERON:0001893!6.78e-12!29;UBERON:0007811!4.47e-10!86;UBERON:0000153!5.28e-09!94;UBERON:0000956!8.39e-08!21;UBERON:0001869!8.39e-08!21;UBERON:0000203!8.39e-08!21;UBERON:0002021!3.08e-07!10;UBERON:0000411!3.08e-07!10;UBERON:0001950!3.08e-07!10;UBERON:0002619!3.21e-07!17;UBERON:0004111!7.45e-07!122
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.02e-28,64;UBERON:0003075,3.02e-28,64;UBERON:0007284,3.02e-28,64;UBERON:0000073,1.45e-26,54;UBERON:0001049,7.50e-26,52;UBERON:0005068,7.50e-26,52;UBERON:0006241,7.50e-26,52;UBERON:0007135,7.50e-26,52;UBERON:0010371,1.04e-23,73;UBERON:0000955,4.23e-23,47;UBERON:0006238,4.23e-23,47;UBERON:0004121,6.32e-22,95;UBERON:0000924,6.32e-22,95;UBERON:0006601,6.32e-22,95;UBERON:0001016,1.04e-21,75;UBERON:0002616,1.53e-21,46;UBERON:0001017,5.07e-21,73;UBERON:0003056,1.47e-20,49;UBERON:0002020,2.17e-20,34;UBERON:0010314,2.10e-18,92;UBERON:0003528,6.44e-18,29;UBERON:0002791,6.44e-18,29;UBERON:0001893,6.44e-18,29;UBERON:0003080,1.05e-16,40;UBERON:0002780,2.39e-15,39;UBERON:0001890,2.39e-15,39;UBERON:0006240,2.39e-15,39;UBERON:0002021,3.03e-15,10;UBERON:0000411,3.03e-15,10;UBERON:0001950,3.03e-15,10;UBERON:0002619,3.37e-12,17;UBERON:0000956,2.80e-11,21;UBERON:0001869,2.80e-11,21;UBERON:0000203,2.80e-11,21;UBERON:0003076,4.44e-10,12;UBERON:0003057,4.44e-10,12;UBERON:0004111,8.11e-10,122;UBERON:0000025,2.01e-09,114;UBERON:0002420,3.83e-08,8;UBERON:0007245,3.83e-08,8;UBERON:0010009,3.83e-08,8;UBERON:0010011,3.83e-08,8;UBERON:0000454,3.83e-08,8
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.595303031057488,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0.436050312760893,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,2.06268836910977,0.606949382578793,0.528990979272033,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0.599200221036809,0.384218305321555,0.518448061542388,0.270011876663381,0.210324961351382,1.99955689082663,0.883474163806454,0.367472397644862,0.287536413054709,0,0,2.55374676170375,2.76491759861238,2.1101806036831,2.10421580285542,1.56274011167028,3.07101298901519,0.56276261003168,1.98637722109853,1.76777151284201,1.42371680799103,0.931997229126503,0.757261933331841,1.36028808192214,1.44932244350839,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0.452167921657868,0.587943535678524,0.376999773989026,0,0.289198713839823,0,0,0,0,0,4.68449275218475,3.97948742945565,0,0.11981512450592,1.19980546198682,0.508280908292259,2.84602214869163,1.37250180845588,0.879580464790051,2.08589184230732,4.60287823194595,1.87009240103604,1.78465389374533,0.305518091550949,0,0.252722758433675,0.210441855886474,0.780722657776222,0.459804208866946,1.62055916824814,1.20563854268572,1.7009124787832,1.2811372028485,2.99845518591132,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,1.47202963994889,2.16099685996497,0,0.528901133327089,0,0.232236671860439,0.257734922644187,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0.432276099749388,0.398282546508734,0.189667900953082,0.342745537829186,0,0,0,0.280543279561274,0.189709611372772,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0.585400943573396,0,0.664394068946325,0.159454768657487,0,0.345369963731791,0,3.01582567878545,1.08781136763742,0,0,3.21101179975584,3.04750385139728,0,0,0,0.390438744296638,0,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0.395287777946524,3.21321316421807,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0.485561272309963,0.302323556964751,0.565815239267694,0,0.307435147943927,0,0.727067458955011,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0.441056796109924,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,4.63563255026274,0.170870880797853,0,0,0,0,0.228778173206523,0.509935289981566,0.839708713941948,0.690999869022119,0.954670618015114,0.158167996790568,0.406638934253697,0,0.418176592028937,0,0.134864346384821,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.314578033277133,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.39736270956253,0,0,0.100966449948148,0.304827226619999,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,1.15913756419314,0,0.549454872801795,0.214368379079066,1.00314420807073,2.25900737046827,3.68260189205742,2.86447756719698,1.89038500578056,2.74033007908257,3.7769694869485,1.35004500046361,0.45032120322422,2.26571204492102,2.5888015587591,0.415149390336707,0,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.754505365544305,0.37456602987953,0.192075457214608,0.287177344778066,0.952587382566147,0.231768651889711,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.0846146078916765,0,0.789209134313529,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0.30246421130683,0,0.33575854382378,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0.157731082679119,0.274228867211478,0,0.595303031057488,0,0,0,0,0,0.430761996159075,0,0,0,0,0,0,0,0.577703239502549,0.166234645358492,0.204169356262369,0.418531630736908,0,0,0,0,0,0.125896817975577,0.304130793658544,0.367093504323363,0,0.436050312760893,0.659058548203415,0.194429899074283,0.139986421625363,0,0,0,0,0.771778308107841,0.286533439938757,2.06268836910977,0.606949382578793,0.528990979272033,0,0,0,0.899899717281399,1.97773272513395,0.7104801149461,0.599200221036809,0.384218305321555,0.518448061542388,0.270011876663381,0.210324961351382,1.99955689082663,0.883474163806454,0.367472397644862,0.287536413054709,0,0,2.55374676170375,2.76491759861238,2.1101806036831,2.10421580285542,1.56274011167028,3.07101298901519,0.56276261003168,1.98637722109853,1.76777151284201,1.42371680799103,0.931997229126503,0.757261933331841,1.36028808192214,1.44932244350839,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.11418387971906,0.258937883647172,0.148442139064825,0,0,0,0.452167921657868,0.587943535678524,0.376999773989026,0,0.289198713839823,0,0,0,0,0,4.68449275218475,3.97948742945565,0,0.11981512450592,1.19980546198682,0.508280908292259,2.84602214869163,1.37250180845588,0.879580464790051,2.08589184230732,4.60287823194595,1.87009240103604,1.78465389374533,0.305518091550949,0,0.252722758433675,0.210441855886474,0.780722657776222,0.459804208866946,1.62055916824814,1.20563854268572,1.7009124787832,1.2811372028485,2.99845518591132,0.517406741478031,0.215567992932842,0.189106080167819,0.175951124163949,0,0,0.348252166522167,0,0.199034266818493,0,0.257347907114715,0,0,0,0.180062061461015,0,0,0,0,0,0.233530684734339,0.16455984991348,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,1.47202963994889,2.16099685996497,0,0.528901133327089,0,0.232236671860439,0.257734922644187,0,0.444756087689741,0.190225626112559,0,0.329397909448022,0,0.198956472041151,0,0,0.432276099749388,0.398282546508734,0.189667900953082,0.342745537829186,0,0,0,0.280543279561274,0.189709611372772,0,0.156998727841375,0.123397163921801,0.296452627087149,0,0.196558995113203,0,0.202860121388503,0.241177159752417,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.184753190166605,0,0,0.169745085775188,0,0,0.238043640886014,0.585400943573396,0,0.664394068946325,0.159454768657487,0,0.345369963731791,0,3.01582567878545,1.08781136763742,0,0,3.21101179975584,3.04750385139728,0,0,0,0.390438744296638,0,0,0.668396022247182,0.283076530788832,0,0.292255857911312,0.395287777946524,3.21321316421807,0.141940085208269,0,0.162886959353576,0.329940245945071,0,0.485561272309963,0.302323556964751,0.565815239267694,0,0.307435147943927,0,0.727067458955011,0.712994756769443,0.316036757935816,1.05418608574999,0,0.340439605753788,0.36012218806262,0.258717367565509,0.214337035031592,0.177340233642274,0.356737635204141,0.493647061806363,0.608929898229199,0,0,0.441056796109924,0.16488625294148,0,0.120625849856312,0,0.164140899745061,0,4.63563255026274,0.170870880797853,0,0,0,0,0.228778173206523,0.509935289981566,0.839708713941948,0.690999869022119,0.954670618015114,0.158167996790568,0.406638934253697,0,0.418176592028937,0,0.134864346384821,0.41326727862668,0.523511883968059,0.259229946583586,0,0,0.149516546043979,0.165458490457098,0,0.129159823477731,0.168956125490778,0.117357238645754,0,0.314578033277133,0,0.288030006257865,0,0.202725215290164,0.102710957164827,0,0,0.39736270956253,0,0,0.100966449948148,0.304827226619999,0.100826185136841,0.194915761479505,0.0962118416403295,0,0.226730383615211,0,0,0,1.15913756419314,0,0.549454872801795,0.214368379079066,1.00314420807073,2.25900737046827,3.68260189205742,2.86447756719698,1.89038500578056,2.74033007908257,3.7769694869485,1.35004500046361,0.45032120322422,2.26571204492102,2.5888015587591,0.415149390336707,0,0.341467211508268,0,0,0.183843508450014,0,0.206035057238894,0,0.252697211763798,0.25347929989024,0.754505365544305,0.37456602987953,0.192075457214608,0.287177344778066,0.952587382566147,0.231768651889711,0,0.412085900803307,0.294397840268795,0,0.177475806159338,0.476872379894642,0.436039249896986,0.564656282491984,0.0846146078916765,0,0.789209134313529,0,0,0.237270036248348,0.197008964751127,0.409231043169689,0.154936841185966,0.192906610981141,0.249810577937946,0.233931608445408,0.214871054048298,0.191288332068843,0.441182838239031,0.231867835620421
|short_description=p9@Tbc1d9
|short_description=p9@Tbc1d9
}}
}}

Revision as of 09:12, 14 November 2012

Short description:p9@Tbc1d9
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_9_at_Tbc1d9_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -164bp_to_ENSMUST00000093393_5end
EntrezGene:Tbc1d9
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p9@Tbc1d9

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.27
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.60
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.30
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.66
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C30.61
Mouse Granule cells, donor2.CNhs12357.11731-123E30.53
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.90
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.52
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.27
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.29
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.55
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D72.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D42.11
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.10
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.42
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.76
Mouse Schwann, donor2.CNhs12573.11746-123F91.36
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G31.45
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.59
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D11.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.51
corpora quadrigemina, adult.CNhs10501.16-22A42.85
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D52.09
cortex, neonate N30.CNhs11107.1392-42F24.60
diencephalon, adult.CNhs10482.20-12F21.87
diencephalon, neonate N30.CNhs11201.1388-42B21.78
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.31
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D41.21
eyeball, neonate N00.CNhs11207.633-15C61.70
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G83.00
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.19
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.16
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.22
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G12.16
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.40
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.19
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.20
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.31
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.59
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.66
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.35
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A13.02
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A11.09
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C23.21
medulla oblongata, neonate N30.CNhs11200.1396-42A33.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.57
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.71
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.26
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.61
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.16
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.64
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.51
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.69
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.52
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.29
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.23
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E41.16
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.55
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.68
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.89
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.74
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.45
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.27
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.59
whole body, embryo E11.CNhs11014.324-5I80.42
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.08
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.20
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.15
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I50.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.21
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm3.02e-2864
neural plate3.02e-2864
presumptive neural plate3.02e-2864
regional part of nervous system1.45e-2654
neural tube7.50e-2652
neural rod7.50e-2652
future spinal cord7.50e-2652
neural keel7.50e-2652
ecto-epithelium1.04e-2373
brain4.23e-2347
future brain4.23e-2347
ectoderm-derived structure6.32e-2295
ectoderm6.32e-2295
presumptive ectoderm6.32e-2295
nervous system1.04e-2175
regional part of brain1.53e-2146
central nervous system5.07e-2173
pre-chordal neural plate1.47e-2049
gray matter2.17e-2034
structure with developmental contribution from neural crest2.10e-1892
brain grey matter6.44e-1829
regional part of telencephalon6.44e-1829
telencephalon6.44e-1829
anterior neural tube1.05e-1640
regional part of forebrain2.39e-1539
forebrain2.39e-1539
future forebrain2.39e-1539
occipital lobe3.03e-1510
visual cortex3.03e-1510
neocortex3.03e-1510
regional part of cerebral cortex3.37e-1217
cerebral cortex2.80e-1121
cerebral hemisphere2.80e-1121
pallium2.80e-1121
posterior neural tube4.44e-1012
chordal neural plate4.44e-1012
anatomical conduit8.11e-10122
tube2.01e-09114
basal ganglion3.83e-088
nuclear complex of neuraxis3.83e-088
aggregate regional part of brain3.83e-088
collection of basal ganglia3.83e-088
cerebral subcortex3.83e-088







Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process. Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.

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