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FFCP PHASE1:Mm9::chr7:149135780..149135803,+: Difference between revisions

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|id=chr7:149135780..149135803,+
|id=chr7:149135780..149135803,+
|ontology_enrichment_celltype=CL:0000117!1.48e-15!23;CL:0000337!1.48e-15!23;CL:0000540!1.22e-14!33;CL:0000047!1.22e-14!33;CL:0000031!1.22e-14!33;CL:0000404!1.22e-14!33;CL:0000221!1.16e-11!44;CL:0000133!1.16e-11!44;CL:0002319!3.43e-11!43;CL:0000393!1.53e-10!39;CL:0000211!1.53e-10!39;CL:0000055!5.89e-08!50
|ontology_enrichment_celltype=CL:0000117!1.48e-15!23;CL:0000337!1.48e-15!23;CL:0000540!1.22e-14!33;CL:0000047!1.22e-14!33;CL:0000031!1.22e-14!33;CL:0000404!1.22e-14!33;CL:0000221!1.16e-11!44;CL:0000133!1.16e-11!44;CL:0002319!3.43e-11!43;CL:0000393!1.53e-10!39;CL:0000211!1.53e-10!39;CL:0000055!5.89e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,5.13e-23,23;CL:0000337,5.13e-23,23;CL:0000540,7.11e-17,33;CL:0000047,7.11e-17,33;CL:0000031,7.11e-17,33;CL:0000404,7.11e-17,33;CL:0000393,3.31e-13,39;CL:0000211,3.31e-13,39;CL:0000221,4.99e-12,44;CL:0000133,4.99e-12,44;CL:0002319,2.38e-11,43
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!2.70e-33!75;UBERON:0001016!2.70e-33!75;UBERON:0001017!5.43e-33!73;UBERON:0005743!5.43e-33!73;UBERON:0000033!3.70e-30!63;UBERON:0001049!4.84e-30!52;UBERON:0005068!4.84e-30!52;UBERON:0006241!4.84e-30!52;UBERON:0007135!4.84e-30!52;UBERON:0000955!3.67e-28!50;UBERON:0006238!3.67e-28!50;UBERON:0002346!3.68e-28!71;UBERON:0003075!3.68e-28!71;UBERON:0007284!3.68e-28!71;UBERON:0004121!4.09e-28!102;UBERON:0000924!4.09e-28!102;UBERON:0006601!4.09e-28!102;UBERON:0002616!1.65e-27!49;UBERON:0003056!2.10e-25!49;UBERON:0003080!5.76e-23!40;UBERON:0002780!4.02e-22!39;UBERON:0001890!4.02e-22!39;UBERON:0006240!4.02e-22!39;UBERON:0002020!4.54e-21!34;UBERON:0002791!2.67e-17!29;UBERON:0003528!2.67e-17!29;UBERON:0001893!2.67e-17!29;UBERON:0007811!3.57e-16!86;UBERON:0000153!6.56e-13!94;UBERON:0000956!5.02e-12!21;UBERON:0001869!5.02e-12!21;UBERON:0000203!5.02e-12!21;UBERON:0002619!8.11e-10!17;UBERON:0002021!2.69e-09!10;UBERON:0000411!2.69e-09!10;UBERON:0001950!2.69e-09!10;UBERON:0003076!1.89e-07!12;UBERON:0003057!1.89e-07!12
|ontology_enrichment_uberon=UBERON:0000073!2.70e-33!75;UBERON:0001016!2.70e-33!75;UBERON:0001017!5.43e-33!73;UBERON:0005743!5.43e-33!73;UBERON:0000033!3.70e-30!63;UBERON:0001049!4.84e-30!52;UBERON:0005068!4.84e-30!52;UBERON:0006241!4.84e-30!52;UBERON:0007135!4.84e-30!52;UBERON:0000955!3.67e-28!50;UBERON:0006238!3.67e-28!50;UBERON:0002346!3.68e-28!71;UBERON:0003075!3.68e-28!71;UBERON:0007284!3.68e-28!71;UBERON:0004121!4.09e-28!102;UBERON:0000924!4.09e-28!102;UBERON:0006601!4.09e-28!102;UBERON:0002616!1.65e-27!49;UBERON:0003056!2.10e-25!49;UBERON:0003080!5.76e-23!40;UBERON:0002780!4.02e-22!39;UBERON:0001890!4.02e-22!39;UBERON:0006240!4.02e-22!39;UBERON:0002020!4.54e-21!34;UBERON:0002791!2.67e-17!29;UBERON:0003528!2.67e-17!29;UBERON:0001893!2.67e-17!29;UBERON:0007811!3.57e-16!86;UBERON:0000153!6.56e-13!94;UBERON:0000956!5.02e-12!21;UBERON:0001869!5.02e-12!21;UBERON:0000203!5.02e-12!21;UBERON:0002619!8.11e-10!17;UBERON:0002021!2.69e-09!10;UBERON:0000411!2.69e-09!10;UBERON:0001950!2.69e-09!10;UBERON:0003076!1.89e-07!12;UBERON:0003057!1.89e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.54e-45,54;UBERON:0001049,1.23e-42,52;UBERON:0005068,1.23e-42,52;UBERON:0006241,1.23e-42,52;UBERON:0007135,1.23e-42,52;UBERON:0001017,2.31e-42,73;UBERON:0001016,7.91e-41,75;UBERON:0002346,1.58e-39,64;UBERON:0003075,1.58e-39,64;UBERON:0007284,1.58e-39,64;UBERON:0004121,1.51e-36,95;UBERON:0000924,1.51e-36,95;UBERON:0006601,1.51e-36,95;UBERON:0010371,5.03e-36,73;UBERON:0000955,6.30e-36,47;UBERON:0006238,6.30e-36,47;UBERON:0002616,6.94e-35,46;UBERON:0002020,2.92e-33,34;UBERON:0003080,1.27e-31,40;UBERON:0003056,4.71e-31,49;UBERON:0002780,2.90e-30,39;UBERON:0001890,2.90e-30,39;UBERON:0006240,2.90e-30,39;UBERON:0003528,5.74e-27,29;UBERON:0002791,5.74e-27,29;UBERON:0001893,5.74e-27,29;UBERON:0010314,1.35e-25,92;UBERON:0000956,3.50e-18,21;UBERON:0001869,3.50e-18,21;UBERON:0000203,3.50e-18,21;UBERON:0002619,1.65e-14,17;UBERON:0002021,1.76e-14,10;UBERON:0000411,1.76e-14,10;UBERON:0001950,1.76e-14,10;UBERON:0000025,2.10e-12,114;UBERON:0004111,3.01e-12,122;UBERON:0003076,8.55e-11,12;UBERON:0003057,8.55e-11,12;UBERON:0002420,6.70e-10,8;UBERON:0007245,6.70e-10,8;UBERON:0010009,6.70e-10,8;UBERON:0010011,6.70e-10,8;UBERON:0000454,6.70e-10,8;UBERON:0002240,1.77e-08,6;UBERON:0005174,1.77e-08,6;UBERON:0001137,1.77e-08,6;UBERON:0001948,2.14e-07,5;UBERON:0002315,2.14e-07,5;UBERON:0011216,2.25e-07,194;UBERON:0000369,4.07e-07,5;UBERON:0002435,4.07e-07,5;UBERON:0000204,4.07e-07,5;UBERON:0010082,4.07e-07,5;UBERON:0000483,4.13e-07,174;UBERON:0000119,6.91e-07,176
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.26022798234954,4.23192783417626,6.33831403506179,0,0,0,0,0,0.599200221036809,0,1.45165457231869,1.89008313664367,1.26194976810829,5.99867067247988,4.8591079009355,2.44981598429908,2.01275489138296,0.919218786610021,3.30347642998166,5.49055553766307,4.6081959976873,4.87979264601717,4.20843160571084,3.64639359389732,2.79182999001381,3.37657566019008,2.75036845998258,3.83017161115768,5.26775218956681,5.96478226640962,0.227178579999552,0.377857800533928,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,8.49064311333487,7.12118803165747,0,0,0,0,6.5907881338122,4.11750542536764,6.78533501409468,7.82209440865244,8.43861009190091,6.02585329222724,7.13861557498134,0,0,0,0.841767423545896,0.130120442962704,0,0.360124259610698,0.90422890701429,2.85753296435577,2.562274405697,3.46696380870997,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,5.76265829323993,0,0,0,0.464473343720877,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,4.33683240391152,0,0,0,0,0.430846795465598,0,0.445597348164788,0.566153061577665,1.61924280669958,0.876767573733936,0.395287777946524,2.57057053137446,0.141940085208269,0,0,0,3.98235415019888,0.242780636154981,0,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0,2.13898427030833,1.26414703174326,2.10837217149998,1.03135543248187,2.04263763452273,0.540183282093931,0.517434735131018,1.07168517515796,0.886701168211368,1.07021290561242,1.31639216481697,1.2178597964584,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,7.36520378411483,5.72895513439397,8.07709957015332,2.05524755931193,9.82012066606611,10.1253375034771,6.75481804836331,6.79713613476307,4.14208249401456,0.62272408550506,1.19707462020309,0.853668028770671,0.486213434136588,0.419226325255965,1.2869045591501,0.222246727801615,0.618105171716683,1.28367683836726,0.758091635291392,0.760437899670719,1.13175804831646,0.280924522409647,0.192075457214608,0.804096565378586,0.952587382566147,0.811190281613988,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.715308569841963,0.581385666529314,0.658765662907314,0.592302255241736,1.28049581010941,0.263069711437843,0.950628796921032,0.561142271657738,0.593175090620871,0.394017929502254,0,0.309873682371932,0.385813221962283,2.49810577937946,0.467863216890817,1.28922632428979,0.765153328275374,0.220591419119515,0.463735671240843
|phase1_expression=1.28119077683835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.53077922271926,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0,0,0,0,0,0,0,0,5.26022798234954,4.23192783417626,6.33831403506179,0,0,0,0,0,0.599200221036809,0,1.45165457231869,1.89008313664367,1.26194976810829,5.99867067247988,4.8591079009355,2.44981598429908,2.01275489138296,0.919218786610021,3.30347642998166,5.49055553766307,4.6081959976873,4.87979264601717,4.20843160571084,3.64639359389732,2.79182999001381,3.37657566019008,2.75036845998258,3.83017161115768,5.26775218956681,5.96478226640962,0.227178579999552,0.377857800533928,0,0,0,0.539703191637817,0,0,0.421333260395256,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0.461230994512117,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,8.49064311333487,7.12118803165747,0,0,0,0,6.5907881338122,4.11750542536764,6.78533501409468,7.82209440865244,8.43861009190091,6.02585329222724,7.13861557498134,0,0,0,0.841767423545896,0.130120442962704,0,0.360124259610698,0.90422890701429,2.85753296435577,2.562274405697,3.46696380870997,3.62184719034622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.25724871410318,5.76265829323993,0,0,0,0.464473343720877,0,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.19496408711912,0,0.216138049874694,0.199141273254367,0,0,0,0,0.193952487167626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.65596710964597,4.33683240391152,0,0,0,0,0.430846795465598,0,0.445597348164788,0.566153061577665,1.61924280669958,0.876767573733936,0.395287777946524,2.57057053137446,0.141940085208269,0,0,0,3.98235415019888,0.242780636154981,0,0.377210159511796,0.590603785761546,0.614870295887855,0.516856586336442,0,2.13898427030833,1.26414703174326,2.10837217149998,1.03135543248187,2.04263763452273,0.540183282093931,0.517434735131018,1.07168517515796,0.886701168211368,1.07021290561242,1.31639216481697,1.2178597964584,0,0,0,0,0,0,0,0,0,4.26478194624172,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0.209718688851422,0.241584120826006,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.60078132449013,7.36520378411483,5.72895513439397,8.07709957015332,2.05524755931193,9.82012066606611,10.1253375034771,6.75481804836331,6.79713613476307,4.14208249401456,0.62272408550506,1.19707462020309,0.853668028770671,0.486213434136588,0.419226325255965,1.2869045591501,0.222246727801615,0.618105171716683,1.28367683836726,0.758091635291392,0.760437899670719,1.13175804831646,0.280924522409647,0.192075457214608,0.804096565378586,0.952587382566147,0.811190281613988,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0.354951612318675,0.715308569841963,0.581385666529314,0.658765662907314,0.592302255241736,1.28049581010941,0.263069711437843,0.950628796921032,0.561142271657738,0.593175090620871,0.394017929502254,0,0.309873682371932,0.385813221962283,2.49810577937946,0.467863216890817,1.28922632428979,0.765153328275374,0.220591419119515,0.463735671240843
|short_description=p2@Brsk2
|short_description=p2@Brsk2
}}
}}

Revision as of 16:34, 14 November 2012

Short description:p2@Brsk2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Brsk2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 29bp_to_ENSMUST00000172652_5end
EntrezGene:Brsk2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Brsk2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G71.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.53
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.22
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.26
Mouse Granule cells, donor2.CNhs12357.11731-123E34.23
Mouse Granule cells, donor3.CNhs12108.11636-122C76.34
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.45
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.89
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.26
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D54.86
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D22.45
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.01
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.49
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.61
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.88
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.21
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D83.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.79
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.75
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D63.83
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.27
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E15.96
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.46
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B28.49
cerebellum, neonate N30.CNhs11135.1395-42I27.12
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A46.59
corpus striatum, adult.CNhs10487.19-21D84.12
corpus striatum, neonate N00.CNhs11226.630-43F16.79
cortex, adult.CNhs10473.12-14D57.82
cortex, neonate N30.CNhs11107.1392-42F28.44
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B27.14
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C60.13
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.36
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C62.86
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E85.26
hippocampus, neonate N00.CNhs11228.627-43G15.76
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.46
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C24.66
medulla oblongata, neonate N30.CNhs11200.1396-42A34.34
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.45
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I92.57
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E22.11
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G82.04
pituitary gland, embryo E12.CNhs11018.346-16E60.54
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.17
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.37
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A35.73
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.08
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A76.75
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C91.20
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.80
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.29
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.26
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I52.50
whole body, embryo E18.CNhs10516.493-3B30.47
whole body, neonate N00.CNhs10525.657-19C21.29
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)5.13e-2323
neuroblast (sensu Vertebrata)5.13e-2323
neuron7.11e-1733
neuronal stem cell7.11e-1733
neuroblast7.11e-1733
electrically signaling cell7.11e-1733
electrically responsive cell3.31e-1339
electrically active cell3.31e-1339
ectodermal cell4.99e-1244
neurectodermal cell4.99e-1244
neural cell2.38e-1143

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.54e-4554
neural tube1.23e-4252
neural rod1.23e-4252
future spinal cord1.23e-4252
neural keel1.23e-4252
central nervous system2.31e-4273
nervous system7.91e-4175
neurectoderm1.58e-3964
neural plate1.58e-3964
presumptive neural plate1.58e-3964
ectoderm-derived structure1.51e-3695
ectoderm1.51e-3695
presumptive ectoderm1.51e-3695
ecto-epithelium5.03e-3673
brain6.30e-3647
future brain6.30e-3647
regional part of brain6.94e-3546
gray matter2.92e-3334
anterior neural tube1.27e-3140
pre-chordal neural plate4.71e-3149
regional part of forebrain2.90e-3039
forebrain2.90e-3039
future forebrain2.90e-3039
brain grey matter5.74e-2729
regional part of telencephalon5.74e-2729
telencephalon5.74e-2729
structure with developmental contribution from neural crest1.35e-2592
cerebral cortex3.50e-1821
cerebral hemisphere3.50e-1821
pallium3.50e-1821
regional part of cerebral cortex1.65e-1417
occipital lobe1.76e-1410
visual cortex1.76e-1410
neocortex1.76e-1410
tube2.10e-12114
anatomical conduit3.01e-12122
posterior neural tube8.55e-1112
chordal neural plate8.55e-1112
basal ganglion6.70e-108
nuclear complex of neuraxis6.70e-108
aggregate regional part of brain6.70e-108
collection of basal ganglia6.70e-108
cerebral subcortex6.70e-108
spinal cord1.77e-086
dorsal region element1.77e-086
dorsum1.77e-086
regional part of spinal cord2.14e-075
gray matter of spinal cord2.14e-075
organ system subdivision2.25e-07194
corpus striatum4.07e-075
striatum4.07e-075
ventral part of telencephalon4.07e-075
future corpus striatum4.07e-075
epithelium4.13e-07174
cell layer6.91e-07176







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