FFCP PHASE1:Hg19::chr19:18314836..18314865,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000192!1.89e-08!42;CL:0000514!1.89e-08!42;CL:0000359!6.52e-08!32 | |ontology_enrichment_celltype=CL:0000192!1.89e-08!42;CL:0000514!1.89e-08!42;CL:0000359!6.52e-08!32 | ||
|ontology_enrichment_celltype_v019=CL:0000359;1.31e-07;32 | |ontology_enrichment_celltype_v019=CL:0000359;1.31e-07;32 | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,3.24e-08,43;CL:0000514,3.24e-08,43;CL:0000359,6.37e-08,32 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.16e-11;82 | |ontology_enrichment_development_v019=UBERON:0006601;3.16e-11;82 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.33e-29!82;UBERON:0005743!1.97e-29!86;UBERON:0000073!6.69e-29!94;UBERON:0001016!6.69e-29!94;UBERON:0001049!3.38e-27!57;UBERON:0005068!3.38e-27!57;UBERON:0006241!3.38e-27!57;UBERON:0007135!3.38e-27!57;UBERON:0007023!1.59e-24!115;UBERON:0000955!4.71e-24!69;UBERON:0006238!4.71e-24!69;UBERON:0002616!1.89e-23!59;UBERON:0002346!8.59e-23!90;UBERON:0003075!7.61e-22!86;UBERON:0007284!7.61e-22!86;UBERON:0002780!2.25e-21!41;UBERON:0001890!2.25e-21!41;UBERON:0006240!2.25e-21!41;UBERON:0003080!7.40e-21!42;UBERON:0001893!1.95e-17!34;UBERON:0002020!2.20e-17!34;UBERON:0003528!2.20e-17!34;UBERON:0002791!9.03e-17!33;UBERON:0003056!1.07e-16!61;UBERON:0001869!1.93e-16!32;UBERON:0000924!9.41e-16!173;UBERON:0006601!9.41e-16!173;UBERON:0002619!1.65e-15!22;UBERON:0004121!6.71e-15!169;UBERON:0001950!2.63e-14!20;UBERON:0000033!2.16e-13!123;UBERON:0000153!8.05e-13!129;UBERON:0007811!8.05e-13!129;UBERON:0000025!1.34e-12!194;UBERON:0000956!3.02e-12!25;UBERON:0000203!3.02e-12!25;UBERON:0004111!6.63e-11!241;UBERON:0000477!8.13e-09!286;UBERON:0000483!3.77e-08!309;UBERON:0000119!5.22e-08!312;UBERON:0000475!9.52e-08!365;UBERON:0003076!1.65e-07!15;UBERON:0003057!1.65e-07!15;UBERON:0002420!7.64e-07!9;UBERON:0007245!7.64e-07!9;UBERON:0010009!7.64e-07!9;UBERON:0010011!7.64e-07!9;UBERON:0000454!7.64e-07!9;UBERON:0000481!7.89e-07!347 | |ontology_enrichment_uberon=UBERON:0001017!1.33e-29!82;UBERON:0005743!1.97e-29!86;UBERON:0000073!6.69e-29!94;UBERON:0001016!6.69e-29!94;UBERON:0001049!3.38e-27!57;UBERON:0005068!3.38e-27!57;UBERON:0006241!3.38e-27!57;UBERON:0007135!3.38e-27!57;UBERON:0007023!1.59e-24!115;UBERON:0000955!4.71e-24!69;UBERON:0006238!4.71e-24!69;UBERON:0002616!1.89e-23!59;UBERON:0002346!8.59e-23!90;UBERON:0003075!7.61e-22!86;UBERON:0007284!7.61e-22!86;UBERON:0002780!2.25e-21!41;UBERON:0001890!2.25e-21!41;UBERON:0006240!2.25e-21!41;UBERON:0003080!7.40e-21!42;UBERON:0001893!1.95e-17!34;UBERON:0002020!2.20e-17!34;UBERON:0003528!2.20e-17!34;UBERON:0002791!9.03e-17!33;UBERON:0003056!1.07e-16!61;UBERON:0001869!1.93e-16!32;UBERON:0000924!9.41e-16!173;UBERON:0006601!9.41e-16!173;UBERON:0002619!1.65e-15!22;UBERON:0004121!6.71e-15!169;UBERON:0001950!2.63e-14!20;UBERON:0000033!2.16e-13!123;UBERON:0000153!8.05e-13!129;UBERON:0007811!8.05e-13!129;UBERON:0000025!1.34e-12!194;UBERON:0000956!3.02e-12!25;UBERON:0000203!3.02e-12!25;UBERON:0004111!6.63e-11!241;UBERON:0000477!8.13e-09!286;UBERON:0000483!3.77e-08!309;UBERON:0000119!5.22e-08!312;UBERON:0000475!9.52e-08!365;UBERON:0003076!1.65e-07!15;UBERON:0003057!1.65e-07!15;UBERON:0002420!7.64e-07!9;UBERON:0007245!7.64e-07!9;UBERON:0010009!7.64e-07!9;UBERON:0010011!7.64e-07!9;UBERON:0000454!7.64e-07!9;UBERON:0000481!7.89e-07!347 | ||
|ontology_enrichment_uberon_v019=UBERON:0002780;1.04e-15;41!UBERON:0001890;1.04e-15;41!UBERON:0002619;1.11e-15;22!UBERON:0000073;4.02e-15;53!UBERON:0002616;4.02e-15;53!UBERON:0001893;6.31e-15;34!UBERON:0003528;7.91e-15;34!UBERON:0002020;7.91e-15;34!UBERON:0001869;8.75e-15;32!UBERON:0002791;1.28e-14;32!UBERON:0001950;1.82e-14;20!UBERON:0000956;3.02e-12;25!UBERON:0000203;3.02e-12;25!UBERON:0001017;8.60e-12;75!UBERON:0000955;9.39e-12;68!UBERON:0001016;1.08e-10;83!UBERON:0002420;6.81e-07;9!UBERON:0007245;6.81e-07;9!UBERON:0010009;6.81e-07;9!UBERON:0010011;6.81e-07;9!UBERON:0000454;6.81e-07;9!UBERON:0000125;9.38e-07;9!UBERON:0002308;9.38e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002780;1.04e-15;41!UBERON:0001890;1.04e-15;41!UBERON:0002619;1.11e-15;22!UBERON:0000073;4.02e-15;53!UBERON:0002616;4.02e-15;53!UBERON:0001893;6.31e-15;34!UBERON:0003528;7.91e-15;34!UBERON:0002020;7.91e-15;34!UBERON:0001869;8.75e-15;32!UBERON:0002791;1.28e-14;32!UBERON:0001950;1.82e-14;20!UBERON:0000956;3.02e-12;25!UBERON:0000203;3.02e-12;25!UBERON:0001017;8.60e-12;75!UBERON:0000955;9.39e-12;68!UBERON:0001016;1.08e-10;83!UBERON:0002420;6.81e-07;9!UBERON:0007245;6.81e-07;9!UBERON:0010009;6.81e-07;9!UBERON:0010011;6.81e-07;9!UBERON:0000454;6.81e-07;9!UBERON:0000125;9.38e-07;9!UBERON:0002308;9.38e-07;9 | ||
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| ||
|short_description=p1@RAB3A | |short_description=p1@RAB3A | ||
}} | }} |
Revision as of 19:21, 18 November 2012
Short description: | p1@RAB3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_RAB3A_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000222256, ENST00000515410_5end |
EntrezGene: | RAB3A |
HGNC: | 9777 |
UniProt: | P20336 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 3.24e-08 | 43 |
smooth muscle myoblast | 3.24e-08 | 43 |
vascular associated smooth muscle cell | 6.37e-08 | 32 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.