FFCP PHASE1:Hg19::chr2:27070964..27071027,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=56896|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=20637|TSSclassifier=S|UniProt=Q9BPU6|association_with_transcript=0bp_to_ENST00000288699,NM_020134,uc002rhu.3_5end|coexpression_cluster_id=C10|description=CAGE_peak_1_at_DPYSL5_5end|id=chr2:27070964..27071027,+|ontology_enrichment_celltype=CL:0002319!2.14e-10!25;CL:0000047!4.69e-08!8;CL:0000133!2.01e-07!59|ontology_enrichment_celltype_v019=CL:0002319;6.45e-14;25!CL:0000540;6.52e-08;6!CL:0000404;6.52e-08;6!CL:0000333;1.79e-07;5!CL:0002321;3.19e-07;15|ontology_enrichment_celltype_v019_2=CL:0002319,5.75e-14,25;CL:0000047,1.24e-10,8;CL:0000133,7.39e-10,59;CL:0000540,5.76e-08,6;CL:0000031,5.76e-08,6;CL:0000404,5.76e-08,6;CL:0000333,2.03e-07,41;CL:0000221,7.96e-07,72|ontology_enrichment_development_v019=UBERON:0006601;2.41e-17;82!CL:0000031;6.52e-08;6|ontology_enrichment_disease=DOID:3095!7.06e-11!22;DOID:2994!7.06e-11!22;DOID:171!2.25e-08!10|ontology_enrichment_disease_v019=DOID:171;2.22e-09;10!DOID:169;2.44e-08;6|ontology_enrichment_disease_v019_2=DOID:171,2.49e-09,10;DOID:169,2.41e-08,6|ontology_enrichment_uberon=UBERON:0000073!6.27e-57!94;UBERON:0001016!6.27e-57!94;UBERON:0005743!7.55e-53!86;UBERON:0001017!3.40e-52!82;UBERON:0001049!1.62e-46!57;UBERON:0005068!1.62e-46!57;UBERON:0006241!1.62e-46!57;UBERON:0007135!1.62e-46!57;UBERON:0002346!7.51e-43!90;UBERON:0000955!4.73e-41!69;UBERON:0006238!4.73e-41!69;UBERON:0003075!1.62e-40!86;UBERON:0007284!1.62e-40!86;UBERON:0002616!3.76e-39!59;UBERON:0002780!4.70e-36!41;UBERON:0001890!4.70e-36!41;UBERON:0006240!4.70e-36!41;UBERON:0003080!8.74e-35!42;UBERON:0000924!1.60e-31!173;UBERON:0006601!1.60e-31!173;UBERON:0003056!5.05e-31!61;UBERON:0001893!5.80e-30!34;UBERON:0002020!6.57e-30!34;UBERON:0003528!6.57e-30!34;UBERON:0004121!1.68e-29!169;UBERON:0002791!4.77e-29!33;UBERON:0001869!7.27e-28!32;UBERON:0000033!9.64e-24!123;UBERON:0000153!6.36e-23!129;UBERON:0007811!6.36e-23!129;UBERON:0000956!3.10e-21!25;UBERON:0000203!3.10e-21!25;UBERON:0007023!5.61e-21!115;UBERON:0002619!1.14e-18!22;UBERON:0001950!4.38e-17!20;UBERON:0003076!1.64e-12!15;UBERON:0003057!1.64e-12!15;UBERON:0004732!1.10e-10!13;UBERON:0002308!3.83e-10!9;UBERON:0000125!3.83e-10!9;UBERON:0004733!1.11e-09!12;UBERON:0002028!1.11e-09!12;UBERON:0007277!1.11e-09!12;UBERON:0002420!1.41e-09!9;UBERON:0007245!1.41e-09!9;UBERON:0010009!1.41e-09!9;UBERON:0010011!1.41e-09!9;UBERON:0000454!1.41e-09!9;UBERON:0000064!1.82e-09!219;UBERON:0000922!4.99e-09!612;UBERON:0009663!2.84e-08!7;UBERON:0000025!1.46e-07!194;UBERON:0001894!1.96e-07!7;UBERON:0006222!1.96e-07!7;UBERON:0002298!4.78e-07!8;UBERON:0002050!6.27e-07!605;UBERON:0005423!6.27e-07!605;UBERON:0002680!6.83e-07!9;UBERON:0001895!6.83e-07!9;UBERON:0010092!6.83e-07!9|ontology_enrichment_uberon_v019=UBERON:0000073;3.76e-36;53!UBERON:0002616;3.76e-36;53!UBERON:0001893;8.88e-36;34!UBERON:0002780;1.11e-35;41!UBERON:0001890;1.11e-35;41!UBERON:0003528;1.93e-35;34!UBERON:0002020;1.93e-35;34!UBERON:0002791;4.64e-35;32!UBERON:0001869;7.30e-35;32!UBERON:0000956;2.59e-29;25!UBERON:0000203;2.59e-29;25!UBERON:0000955;2.23e-27;68!UBERON:0001016;3.66e-26;83!UBERON:0001017;7.27e-26;75!UBERON:0002619;1.03e-25;22!UBERON:0001950;1.73e-23;20!UBERON:0004732;1.55e-14;13!UBERON:0000125;1.51e-13;9!UBERON:0002308;1.51e-13;9!UBERON:0004733;3.94e-13;12!UBERON:0002028;3.94e-13;12!UBERON:0002420;9.92e-13;9!UBERON:0007245;9.92e-13;9!UBERON:0010009;9.92e-13;9!UBERON:0010011;9.92e-13;9!UBERON:0000454;9.92e-13;9!UBERON:0009663;6.26e-11;7!UBERON:0001894;8.70e-10;7!UBERON:0002298;1.14e-09;6!UBERON:0011216;1.39e-09;132!UBERON:0002680;3.12e-09;9!UBERON:0001895;3.12e-09;9!UBERON:0000200;2.56e-08;6!UBERON:0000922;3.25e-08;49!UBERON:0007023;6.69e-08;114!UBERON:0002021;8.72e-08;5!UBERON:0001872;1.15e-07;5!UBERON:0000013;1.79e-07;5!UBERON:0002410;1.79e-07;5!UBERON:0001871;5.08e-07;6!UBERON:0000349;5.54e-07;5!UBERON:0000369;6.35e-07;4!UBERON:0002435;6.35e-07;4!UBERON:0000204;6.35e-07;4|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-77,89;UBERON:0001017,4.45e-73,81;UBERON:0001049,8.04e-67,56;UBERON:0005068,8.04e-67,56;UBERON:0006241,8.04e-67,56;UBERON:0007135,8.04e-67,56;UBERON:0000073,1.72e-62,53;UBERON:0002616,1.72e-62,53;UBERON:0000955,5.29e-59,68;UBERON:0006238,5.29e-59,68;UBERON:0002346,9.07e-51,86;UBERON:0002780,4.16e-50,41;UBERON:0001890,4.16e-50,41;UBERON:0003080,4.16e-50,41;UBERON:0006240,4.16e-50,41;UBERON:0003075,4.75e-49,82;UBERON:0007284,4.75e-49,82;UBERON:0001893,1.46e-41,34;UBERON:0003528,1.74e-41,34;UBERON:0002020,1.74e-41,34;UBERON:0004121,5.68e-40,171;UBERON:0000924,5.68e-40,171;UBERON:0006601,5.68e-40,171;UBERON:0002791,8.71e-39,32;UBERON:0001869,1.29e-38,32;UBERON:0003056,1.78e-38,61;UBERON:0010371,9.63e-38,104;UBERON:0011216,3.99e-35,223;UBERON:0000956,2.56e-29,25;UBERON:0000203,2.56e-29,25;UBERON:0002619,1.00e-25,22;UBERON:0010314,5.58e-25,132;UBERON:0001950,1.68e-23,20;UBERON:0007023,6.51e-21,114;UBERON:0003076,4.20e-17,15;UBERON:0003057,4.20e-17,15;UBERON:0004732,1.51e-14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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=56896 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20637 | |||
|TSSclassifier=S | |||
|UniProt=Q9BPU6 | |||
|association_with_transcript=0bp_to_ENST00000288699,NM_020134,uc002rhu.3_5end | |||
|coexpression_cluster_id=C10 | |||
|description=CAGE_peak_1_at_DPYSL5_5end | |||
|id=chr2:27070964..27071027,+ | |||
|ontology_enrichment_celltype=CL:0002319!2.14e-10!25;CL:0000047!4.69e-08!8;CL:0000133!2.01e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0002319;6.45e-14;25!CL:0000540;6.52e-08;6!CL:0000404;6.52e-08;6!CL:0000333;1.79e-07;5!CL:0002321;3.19e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,5.75e-14,25;CL:0000047,1.24e-10,8;CL:0000133,7.39e-10,59;CL:0000540,5.76e-08,6;CL:0000031,5.76e-08,6;CL:0000404,5.76e-08,6;CL:0000333,2.03e-07,41;CL:0000221,7.96e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.41e-17;82!CL:0000031;6.52e-08;6 | |||
|ontology_enrichment_disease=DOID:3095!7.06e-11!22;DOID:2994!7.06e-11!22;DOID:171!2.25e-08!10 | |||
|ontology_enrichment_disease_v019=DOID:171;2.22e-09;10!DOID:169;2.44e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:171,2.49e-09,10;DOID:169,2.41e-08,6 | |||
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| |||
|short_description=p1@DPYSL5 | |||
}} |
Revision as of 18:03, 12 September 2013
Short description: | p1@DPYSL5 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_DPYSL5_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | 0bp_to_ENST00000288699, NM_020134, uc002rhu.3_5end |
EntrezGene: | DPYSL5 |
HGNC: | 20637 |
UniProt: | Q9BPU6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 5.75e-14 | 25 |
neuronal stem cell | 1.24e-10 | 8 |
neurectodermal cell | 7.39e-10 | 59 |
neuron | 5.76e-08 | 6 |
neuroblast | 5.76e-08 | 6 |
electrically signaling cell | 5.76e-08 | 6 |
migratory neural crest cell | 2.03e-07 | 41 |
ectodermal cell | 7.96e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
neuroectodermal tumor | 2.49e-09 | 10 |
neuroendocrine tumor | 2.41e-08 | 6 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.