FFCP PHASE1:Hg19::chr3:181431124..181431130,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C1056|description=CAGE_peak_at_chr3:181431124..181431130,+|id=chr3:181431124..181431130,+|ontology_enrichment_celltype=CL:0002319!1.37e-16!25;CL:0000047!1.13e-14!8;CL:0000540!1.74e-11!6;CL:0000031!1.74e-11!6;CL:0000404!1.74e-11!6;CL:0000133!3.89e-10!59;CL:0002322!4.66e-10!5;CL:0000221!3.61e-08!71|ontology_enrichment_celltype_v019=CL:0002322;2.06e-22;5!CL:0000540;9.13e-19;6!CL:0000404;9.13e-19;6!CL:0002605;4.44e-14;3!CL:0002319;5.12e-12;25!CL:0002321;2.39e-10;15|ontology_enrichment_celltype_v019_2=CL:0002322,1.99e-22,5;CL:0000047,5.86e-20,8;CL:0000540,1.22e-18,6;CL:0000031,1.22e-18,6;CL:0000404,1.22e-18,6;CL:0002605,4.67e-14,3;CL:0002319,5.63e-12,25;CL:0000133,9.06e-10,59;CL:0000221,1.38e-07,72|ontology_enrichment_development_v019=CL:0000031;9.13e-19;6|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.94e-56!82;UBERON:0005743!1.63e-54!86;UBERON:0000073!1.63e-53!94;UBERON:0001016!1.63e-53!94;UBERON:0001049!1.55e-50!57;UBERON:0005068!1.55e-50!57;UBERON:0006241!1.55e-50!57;UBERON:0007135!1.55e-50!57;UBERON:0002780!8.90e-44!41;UBERON:0001890!8.90e-44!41;UBERON:0006240!8.90e-44!41;UBERON:0003080!1.75e-42!42;UBERON:0001893!7.88e-42!34;UBERON:0002020!8.64e-42!34;UBERON:0003528!8.64e-42!34;UBERON:0002346!1.55e-41!90;UBERON:0002616!2.45e-41!59;UBERON:0002791!1.73e-40!33;UBERON:0000955!7.02e-40!69;UBERON:0006238!7.02e-40!69;UBERON:0003075!8.35e-39!86;UBERON:0007284!8.35e-39!86;UBERON:0001869!1.55e-38!32;UBERON:0000924!4.87e-37!173;UBERON:0006601!4.87e-37!173;UBERON:0004121!1.35e-34!169;UBERON:0003056!4.23e-33!61;UBERON:0000956!2.30e-28!25;UBERON:0000203!2.30e-28!25;UBERON:0000033!9.94e-28!123;UBERON:0000153!7.23e-27!129;UBERON:0007811!7.23e-27!129;UBERON:0002619!1.48e-23!22;UBERON:0001950!1.24e-20!20;UBERON:0007023!1.31e-20!115;UBERON:0002308!5.62e-15!9;UBERON:0000125!5.62e-15!9;UBERON:0009663!2.99e-12!7;UBERON:0002420!3.44e-12!9;UBERON:0007245!3.44e-12!9;UBERON:0010009!3.44e-12!9;UBERON:0010011!3.44e-12!9;UBERON:0000454!3.44e-12!9;UBERON:0000064!2.53e-10!219;UBERON:0000025!7.08e-10!194;UBERON:0003076!1.76e-09!15;UBERON:0003057!1.76e-09!15;UBERON:0000922!3.58e-09!612;UBERON:0004111!7.26e-09!241;UBERON:0001872!1.45e-08!5;UBERON:0001871!4.95e-08!7;UBERON:0000369!1.51e-07!4;UBERON:0002435!1.51e-07!4;UBERON:0000204!1.51e-07!4;UBERON:0010082!1.51e-07!4;UBERON:0000200!2.15e-07!6;UBERON:0002298!2.75e-07!8;UBERON:0000468!4.23e-07!659;UBERON:0000477!5.11e-07!286|ontology_enrichment_uberon_v019=UBERON:0002791;1.75e-25;32!UBERON:0003528;2.38e-24;34!UBERON:0002020;2.38e-24;34!UBERON:0001893;4.60e-22;34!UBERON:0001869;1.09e-21;32!UBERON:0000956;1.05e-18;25!UBERON:0000203;1.05e-18;25!UBERON:0002780;1.26e-16;41!UBERON:0001890;1.26e-16;41!UBERON:0000073;1.39e-16;53!UBERON:0002616;1.39e-16;53!UBERON:0002420;3.74e-12;9!UBERON:0000125;3.74e-12;9!UBERON:0007245;3.74e-12;9!UBERON:0002308;3.74e-12;9!UBERON:0010009;3.74e-12;9!UBERON:0010011;3.74e-12;9!UBERON:0000454;3.74e-12;9!UBERON:0002619;2.61e-11;22!UBERON:0009663;2.23e-10;7!UBERON:0001950;1.13e-09;20!UBERON:0001016;1.35e-09;83!UBERON:0000955;4.50e-09;68!UBERON:0000922;5.33e-08;49!UBERON:0001017;9.10e-08;75!UBERON:0005383;9.61e-07;3!UBERON:0005382;9.61e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.49e-31,81;UBERON:0001016,1.23e-29,89;UBERON:0003528,2.84e-29,34;UBERON:0002020,2.84e-29,34;UBERON:0002791,2.75e-27,32;UBERON:0001049,5.56e-27,56;UBERON:0005068,5.56e-27,56;UBERON:0006241,5.56e-27,56;UBERON:0007135,5.56e-27,56;UBERON:0000073,1.33e-25,53;UBERON:0002616,1.33e-25,53;UBERON:0001893,1.57e-25,34;UBERON:0002780,8.24e-24,41;UBERON:0001890,8.24e-24,41;UBERON:0003080,8.24e-24,41;UBERON:0006240,8.24e-24,41;UBERON:0001869,1.65e-23,32;UBERON:0003075,4.10e-19,82;UBERON:0007284,4.10e-19,82;UBERON:0000956,6.28e-19,25;UBERON:0000203,6.28e-19,25;UBERON:0000955,9.95e-19,68;UBERON:0006238,9.95e-19,68;UBERON:0002346,5.23e-18,86;UBERON:0003056,3.72e-17,61;UBERON:0004121,3.08e-15,171;UBERON:0000924,3.08e-15,171;UBERON:0006601,3.08e-15,171;UBERON:0010371,4.42e-14,104;UBERON:0010314,1.71e-12,132;UBERON:0000125,3.18e-12,9;UBERON:0002308,3.18e-12,9;UBERON:0002420,3.42e-12,9;UBERON:0007245,3.42e-12,9;UBERON:0010009,3.42e-12,9;UBERON:0010011,3.42e-12,9;UBERON:0000454,3.42e-12,9;UBERON:0011216,4.09e-12,223;UBERON:0002619,1.70e-11,22;UBERON:0009663,2.60e-10,7;UBERON:0001950,7.21e-10,20|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71741592278634,2.32686522623903,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C1056 | |||
|description=CAGE_peak_at_chr3:181431124..181431130,+ | |||
|id=chr3:181431124..181431130,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.37e-16!25;CL:0000047!1.13e-14!8;CL:0000540!1.74e-11!6;CL:0000031!1.74e-11!6;CL:0000404!1.74e-11!6;CL:0000133!3.89e-10!59;CL:0002322!4.66e-10!5;CL:0000221!3.61e-08!71 | |||
|ontology_enrichment_celltype_v019=CL:0002322;2.06e-22;5!CL:0000540;9.13e-19;6!CL:0000404;9.13e-19;6!CL:0002605;4.44e-14;3!CL:0002319;5.12e-12;25!CL:0002321;2.39e-10;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,1.99e-22,5;CL:0000047,5.86e-20,8;CL:0000540,1.22e-18,6;CL:0000031,1.22e-18,6;CL:0000404,1.22e-18,6;CL:0002605,4.67e-14,3;CL:0002319,5.63e-12,25;CL:0000133,9.06e-10,59;CL:0000221,1.38e-07,72 | |||
|ontology_enrichment_development_v019=CL:0000031;9.13e-19;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.94e-56!82;UBERON:0005743!1.63e-54!86;UBERON:0000073!1.63e-53!94;UBERON:0001016!1.63e-53!94;UBERON:0001049!1.55e-50!57;UBERON:0005068!1.55e-50!57;UBERON:0006241!1.55e-50!57;UBERON:0007135!1.55e-50!57;UBERON:0002780!8.90e-44!41;UBERON:0001890!8.90e-44!41;UBERON:0006240!8.90e-44!41;UBERON:0003080!1.75e-42!42;UBERON:0001893!7.88e-42!34;UBERON:0002020!8.64e-42!34;UBERON:0003528!8.64e-42!34;UBERON:0002346!1.55e-41!90;UBERON:0002616!2.45e-41!59;UBERON:0002791!1.73e-40!33;UBERON:0000955!7.02e-40!69;UBERON:0006238!7.02e-40!69;UBERON:0003075!8.35e-39!86;UBERON:0007284!8.35e-39!86;UBERON:0001869!1.55e-38!32;UBERON:0000924!4.87e-37!173;UBERON:0006601!4.87e-37!173;UBERON:0004121!1.35e-34!169;UBERON:0003056!4.23e-33!61;UBERON:0000956!2.30e-28!25;UBERON:0000203!2.30e-28!25;UBERON:0000033!9.94e-28!123;UBERON:0000153!7.23e-27!129;UBERON:0007811!7.23e-27!129;UBERON:0002619!1.48e-23!22;UBERON:0001950!1.24e-20!20;UBERON:0007023!1.31e-20!115;UBERON:0002308!5.62e-15!9;UBERON:0000125!5.62e-15!9;UBERON:0009663!2.99e-12!7;UBERON:0002420!3.44e-12!9;UBERON:0007245!3.44e-12!9;UBERON:0010009!3.44e-12!9;UBERON:0010011!3.44e-12!9;UBERON:0000454!3.44e-12!9;UBERON:0000064!2.53e-10!219;UBERON:0000025!7.08e-10!194;UBERON:0003076!1.76e-09!15;UBERON:0003057!1.76e-09!15;UBERON:0000922!3.58e-09!612;UBERON:0004111!7.26e-09!241;UBERON:0001872!1.45e-08!5;UBERON:0001871!4.95e-08!7;UBERON:0000369!1.51e-07!4;UBERON:0002435!1.51e-07!4;UBERON:0000204!1.51e-07!4;UBERON:0010082!1.51e-07!4;UBERON:0000200!2.15e-07!6;UBERON:0002298!2.75e-07!8;UBERON:0000468!4.23e-07!659;UBERON:0000477!5.11e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.75e-25;32!UBERON:0003528;2.38e-24;34!UBERON:0002020;2.38e-24;34!UBERON:0001893;4.60e-22;34!UBERON:0001869;1.09e-21;32!UBERON:0000956;1.05e-18;25!UBERON:0000203;1.05e-18;25!UBERON:0002780;1.26e-16;41!UBERON:0001890;1.26e-16;41!UBERON:0000073;1.39e-16;53!UBERON:0002616;1.39e-16;53!UBERON:0002420;3.74e-12;9!UBERON:0000125;3.74e-12;9!UBERON:0007245;3.74e-12;9!UBERON:0002308;3.74e-12;9!UBERON:0010009;3.74e-12;9!UBERON:0010011;3.74e-12;9!UBERON:0000454;3.74e-12;9!UBERON:0002619;2.61e-11;22!UBERON:0009663;2.23e-10;7!UBERON:0001950;1.13e-09;20!UBERON:0001016;1.35e-09;83!UBERON:0000955;4.50e-09;68!UBERON:0000922;5.33e-08;49!UBERON:0001017;9.10e-08;75!UBERON:0005383;9.61e-07;3!UBERON:0005382;9.61e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.49e-31,81;UBERON:0001016,1.23e-29,89;UBERON:0003528,2.84e-29,34;UBERON:0002020,2.84e-29,34;UBERON:0002791,2.75e-27,32;UBERON:0001049,5.56e-27,56;UBERON:0005068,5.56e-27,56;UBERON:0006241,5.56e-27,56;UBERON:0007135,5.56e-27,56;UBERON:0000073,1.33e-25,53;UBERON:0002616,1.33e-25,53;UBERON:0001893,1.57e-25,34;UBERON:0002780,8.24e-24,41;UBERON:0001890,8.24e-24,41;UBERON:0003080,8.24e-24,41;UBERON:0006240,8.24e-24,41;UBERON:0001869,1.65e-23,32;UBERON:0003075,4.10e-19,82;UBERON:0007284,4.10e-19,82;UBERON:0000956,6.28e-19,25;UBERON:0000203,6.28e-19,25;UBERON:0000955,9.95e-19,68;UBERON:0006238,9.95e-19,68;UBERON:0002346,5.23e-18,86;UBERON:0003056,3.72e-17,61;UBERON:0004121,3.08e-15,171;UBERON:0000924,3.08e-15,171;UBERON:0006601,3.08e-15,171;UBERON:0010371,4.42e-14,104;UBERON:0010314,1.71e-12,132;UBERON:0000125,3.18e-12,9;UBERON:0002308,3.18e-12,9;UBERON:0002420,3.42e-12,9;UBERON:0007245,3.42e-12,9;UBERON:0010009,3.42e-12,9;UBERON:0010011,3.42e-12,9;UBERON:0000454,3.42e-12,9;UBERON:0011216,4.09e-12,223;UBERON:0002619,1.70e-11,22;UBERON:0009663,2.60e-10,7;UBERON:0001950,7.21e-10,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.71741592278634,2.32686522623903,1.38096903554283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0.443458794925128,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31750041646231,1.06023814657188,1.74290914304278,1.86589899027667,2.27088765788066,2.18986415445498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,3.36198174427723,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.76228387266739,2.60279707715243,1.54657762555539,1.67516265334349,3.18969375826582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.644566922551274,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21360521749513,0,0,0,0,0,0,1.82870241333667,0,0,0,0.597743964753209,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,1.137934482855,0.508507300585533,0.236387681767936,0.689486746482929,0.291604613383254,0,1.77148277162768,0.844175070377856,0,0.663475559587348,1.77328571372128,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.424059214301822,0,0,0,0,0,0.247127877893006,0.208843899010911,0.876214728748802,0,0.937057782901357,0,0,0,0,0,2.14250933141343,0,0,0.103688191397247,0,0,0,0,0.284609546029793,0,0,0,0,0,0.51595809741485,0,0,0,0,0,0.225980740780532,0,0,0.569797163602908,0.195551382734803,0,0,0,0,0.343609788497747,0.686379991447858,0,0,0,0.135904206073614,0,0,0,0.600420288709789,1.23214841002794,0,0,0,0,0,0,1.59743200399193,0,0,0,0,0,0,0,0,0,0,0.795229689809303,1.49823746722733,0.803765742325096,1.51293380256957,2.07720169014593,0,0,0.728994679896296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,1.98348902614035,0,0,0,0,0.828478110694391,0,0,0,0,0,0,0,0,0,0,1.95242023843141,1.752673029891,0,1.44207766997908,0.124192805882767,0,0.124980407962107,0,0,0,0.936669811613763,0.579684114443301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.967809053062115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.98805289526203,0,0.169732529954025,0.212574920101683,0.867550349813015,0,0,0,0,0,0,0.321146125482298,0,1.75597244962866,0.41023272848151,3.27693205088234,0.484100767249525,0.807378228159255,0,0.196295437002051,0.471878893390961,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,0.781078098613847,0.413373593002368,0.443910671357348,2.7348740450911,0,0,0,1.14986184875636,0,0,0.606965604236632,0,0,0,0,0.40781839786099,0.263091094251396,0,0,0,1.09980912941201,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,6.08242605001475,0,0,1.35535298446752,0,0.301925687133347,0,0,0,0,0,0.196308467114945,0.297046400327086,4.226557275834,0,0,0,0,0.357107877211315,0,0,0,0,2.86679166302903,0.157771562193185,0.203974470572744,6.10890966476528,0,0,0,0,3.91115916988745,1.63898357945543,0,0.713921808193872,0.534434810531121,0.0918948995348449,1.75495277504663,0.0757786982182394,0,0.829169439458779,2.27552590896169,0,0.23806443146374,0,0,0,0,0,0.217716747896961,1.02669990325584,0,0,0.665320713092027,0.0814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p@chr3:181431124..181431130,+ | |||
}} |
Revision as of 22:55, 12 September 2013
Short description: | p@chr3:181431124..181431130, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:181431124..181431130, + |
Coexpression cluster: | C1056_small_Neural_Astrocyte_teratocarcinoma_H9_hippocampus_testicular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 1.99e-22 | 5 |
neuronal stem cell | 5.86e-20 | 8 |
neuron | 1.22e-18 | 6 |
neuroblast | 1.22e-18 | 6 |
electrically signaling cell | 1.22e-18 | 6 |
astrocyte of the cerebral cortex | 4.67e-14 | 3 |
neural cell | 5.63e-12 | 25 |
neurectodermal cell | 9.06e-10 | 59 |
ectodermal cell | 1.38e-07 | 72 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.