FFCP PHASE1:Mm9::chr13:54850974..54850986,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=26913|HGNC=|MCL_coexpression_id=13|UniProt=Q3UNH4|association_with_transcript=43bp_to_ENSMUST00000099506,NM_012014,uc007qpa.1,uc007qpb.1_5end|description=CAGE_peak_3_at_Gprin1_5end|id=chr13:54850974..54850986,-|ontology_enrichment_celltype=CL:0000117!1.17e-18!23;CL:0000337!1.17e-18!23;CL:0000540!1.63e-15!33;CL:0000047!1.63e-15!33;CL:0000031!1.63e-15!33;CL:0000404!1.63e-15!33;CL:0000393!2.24e-11!39;CL:0000211!2.24e-11!39;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0002319!2.49e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,5.73e-30,23;CL:0000337,5.73e-30,23;CL:0000540,7.18e-25,33;CL:0000047,7.18e-25,33;CL:0000031,7.18e-25,33;CL:0000404,7.18e-25,33;CL:0000393,5.29e-20,39;CL:0000211,5.29e-20,39;CL:0002319,1.60e-17,43;CL:0000221,5.67e-17,44;CL:0000133,5.67e-17,44;CL:0002609,1.32e-09,6;CL:0002321,2.52e-08,70;CL:0000120,5.31e-07,3;CL:0002613,5.55e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!4.90e-30!71;UBERON:0003075!4.90e-30!71;UBERON:0007284!4.90e-30!71;UBERON:0000033!1.18e-28!63;UBERON:0001017!1.23e-28!73;UBERON:0005743!1.23e-28!73;UBERON:0001049!7.87e-28!52;UBERON:0005068!7.87e-28!52;UBERON:0006241!7.87e-28!52;UBERON:0007135!7.87e-28!52;UBERON:0000073!3.22e-27!75;UBERON:0001016!3.22e-27!75;UBERON:0003056!1.34e-26!49;UBERON:0004121!7.98e-26!102;UBERON:0000924!7.98e-26!102;UBERON:0006601!7.98e-26!102;UBERON:0000955!1.17e-25!50;UBERON:0006238!1.17e-25!50;UBERON:0002616!1.07e-24!49;UBERON:0002020!8.36e-24!34;UBERON:0003080!1.54e-22!40;UBERON:0002780!7.15e-22!39;UBERON:0001890!7.15e-22!39;UBERON:0006240!7.15e-22!39;UBERON:0002791!1.65e-19!29;UBERON:0003528!1.65e-19!29;UBERON:0001893!1.65e-19!29;UBERON:0007811!3.15e-15!86;UBERON:0000956!1.26e-13!21;UBERON:0001869!1.26e-13!21;UBERON:0000203!1.26e-13!21;UBERON:0000153!6.61e-13!94;UBERON:0002619!9.25e-11!17;UBERON:0002021!2.20e-09!10;UBERON:0000411!2.20e-09!10;UBERON:0001950!2.20e-09!10;UBERON:0002420!4.23e-07!8;UBERON:0007245!4.23e-07!8;UBERON:0010009!4.23e-07!8;UBERON:0010011!4.23e-07!8;UBERON:0000454!4.23e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.07e-42,34;UBERON:0001017,8.89e-38,73;UBERON:0000073,1.55e-36,54;UBERON:0001016,1.79e-36,75;UBERON:0002346,7.47e-35,64;UBERON:0003075,7.47e-35,64;UBERON:0007284,7.47e-35,64;UBERON:0001049,2.79e-34,52;UBERON:0005068,2.79e-34,52;UBERON:0006241,2.79e-34,52;UBERON:0007135,2.79e-34,52;UBERON:0003528,1.36e-33,29;UBERON:0002791,1.36e-33,29;UBERON:0001893,1.36e-33,29;UBERON:0004121,1.99e-32,95;UBERON:0000924,1.99e-32,95;UBERON:0006601,1.99e-32,95;UBERON:0010371,2.88e-29,73;UBERON:0000955,3.21e-29,47;UBERON:0006238,3.21e-29,47;UBERON:0003056,8.95e-29,49;UBERON:0003080,2.59e-28,40;UBERON:0002616,1.30e-27,46;UBERON:0002780,4.11e-27,39;UBERON:0001890,4.11e-27,39;UBERON:0006240,4.11e-27,39;UBERON:0000956,1.89e-26,21;UBERON:0001869,1.89e-26,21;UBERON:0000203,1.89e-26,21;UBERON:0010314,4.49e-21,92;UBERON:0002619,8.85e-21,17;UBERON:0002021,6.93e-17,10;UBERON:0000411,6.93e-17,10;UBERON:0001950,6.93e-17,10;UBERON:0000025,1.51e-10,114;UBERON:0001948,2.34e-09,5;UBERON:0002315,2.34e-09,5;UBERON:0004111,2.85e-09,122;UBERON:0002420,3.25e-08,8;UBERON:0007245,3.25e-08,8;UBERON:0010009,3.25e-08,8;UBERON:0010011,3.25e-08,8;UBERON:0000454,3.25e-08,8;UBERON:0002240,1.06e-07,6;UBERON:0005174,1.06e-07,6;UBERON:0001137,1.06e-07,6;UBERON:0011216,2.37e-07,194;UBERON:0000369,9.48e-07,5;UBERON:0002435,9.48e-07,5;UBERON:0000204,9.48e-07,5;UBERON:0010082,9.48e-07,5|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,6.87875966922632,9.52183762689659,6.33831403506179,0,0,0,0,0,0,0,1.76272340924412,2.56511282830212,2.3135745748652,3.42781181284564,2.42955395046775,3.30725157880376,3.06705507258356,1.83843757322004,1.10115880999389,1.0214987046815,0.768032666281217,7.25374582516066,6.31264740856627,8.33461392890816,0.837548997004143,3.93933827022176,1.98637722109853,4.71405736757868,5.41012387036591,5.59198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0.346970653532272,0,0.691846491768175,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,2.72280718857492,0,0,0,0,1.3481157546434,0.457500602818626,3.76963056338593,3.99795936442236,2.55715457330331,1.24672826735736,0.648965052271031,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,1.26043490863744,0.60281927134286,1.63287597963187,1.2811372028485,1.03071897015702,0.776110112217047,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,3.19004298375782,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18949141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| ||
|EntrezGene=26913 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q3UNH4 | |||
|association_with_transcript=43bp_to_ENSMUST00000099506,NM_012014,uc007qpa.1,uc007qpb.1_5end | |||
|description=CAGE_peak_3_at_Gprin1_5end | |||
|id=chr13:54850974..54850986,- | |||
|ontology_enrichment_celltype=CL:0000117!1.17e-18!23;CL:0000337!1.17e-18!23;CL:0000540!1.63e-15!33;CL:0000047!1.63e-15!33;CL:0000031!1.63e-15!33;CL:0000404!1.63e-15!33;CL:0000393!2.24e-11!39;CL:0000211!2.24e-11!39;CL:0000221!1.41e-09!44;CL:0000133!1.41e-09!44;CL:0002319!2.49e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.73e-30,23;CL:0000337,5.73e-30,23;CL:0000540,7.18e-25,33;CL:0000047,7.18e-25,33;CL:0000031,7.18e-25,33;CL:0000404,7.18e-25,33;CL:0000393,5.29e-20,39;CL:0000211,5.29e-20,39;CL:0002319,1.60e-17,43;CL:0000221,5.67e-17,44;CL:0000133,5.67e-17,44;CL:0002609,1.32e-09,6;CL:0002321,2.52e-08,70;CL:0000120,5.31e-07,3;CL:0002613,5.55e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!4.90e-30!71;UBERON:0003075!4.90e-30!71;UBERON:0007284!4.90e-30!71;UBERON:0000033!1.18e-28!63;UBERON:0001017!1.23e-28!73;UBERON:0005743!1.23e-28!73;UBERON:0001049!7.87e-28!52;UBERON:0005068!7.87e-28!52;UBERON:0006241!7.87e-28!52;UBERON:0007135!7.87e-28!52;UBERON:0000073!3.22e-27!75;UBERON:0001016!3.22e-27!75;UBERON:0003056!1.34e-26!49;UBERON:0004121!7.98e-26!102;UBERON:0000924!7.98e-26!102;UBERON:0006601!7.98e-26!102;UBERON:0000955!1.17e-25!50;UBERON:0006238!1.17e-25!50;UBERON:0002616!1.07e-24!49;UBERON:0002020!8.36e-24!34;UBERON:0003080!1.54e-22!40;UBERON:0002780!7.15e-22!39;UBERON:0001890!7.15e-22!39;UBERON:0006240!7.15e-22!39;UBERON:0002791!1.65e-19!29;UBERON:0003528!1.65e-19!29;UBERON:0001893!1.65e-19!29;UBERON:0007811!3.15e-15!86;UBERON:0000956!1.26e-13!21;UBERON:0001869!1.26e-13!21;UBERON:0000203!1.26e-13!21;UBERON:0000153!6.61e-13!94;UBERON:0002619!9.25e-11!17;UBERON:0002021!2.20e-09!10;UBERON:0000411!2.20e-09!10;UBERON:0001950!2.20e-09!10;UBERON:0002420!4.23e-07!8;UBERON:0007245!4.23e-07!8;UBERON:0010009!4.23e-07!8;UBERON:0010011!4.23e-07!8;UBERON:0000454!4.23e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.07e-42,34;UBERON:0001017,8.89e-38,73;UBERON:0000073,1.55e-36,54;UBERON:0001016,1.79e-36,75;UBERON:0002346,7.47e-35,64;UBERON:0003075,7.47e-35,64;UBERON:0007284,7.47e-35,64;UBERON:0001049,2.79e-34,52;UBERON:0005068,2.79e-34,52;UBERON:0006241,2.79e-34,52;UBERON:0007135,2.79e-34,52;UBERON:0003528,1.36e-33,29;UBERON:0002791,1.36e-33,29;UBERON:0001893,1.36e-33,29;UBERON:0004121,1.99e-32,95;UBERON:0000924,1.99e-32,95;UBERON:0006601,1.99e-32,95;UBERON:0010371,2.88e-29,73;UBERON:0000955,3.21e-29,47;UBERON:0006238,3.21e-29,47;UBERON:0003056,8.95e-29,49;UBERON:0003080,2.59e-28,40;UBERON:0002616,1.30e-27,46;UBERON:0002780,4.11e-27,39;UBERON:0001890,4.11e-27,39;UBERON:0006240,4.11e-27,39;UBERON:0000956,1.89e-26,21;UBERON:0001869,1.89e-26,21;UBERON:0000203,1.89e-26,21;UBERON:0010314,4.49e-21,92;UBERON:0002619,8.85e-21,17;UBERON:0002021,6.93e-17,10;UBERON:0000411,6.93e-17,10;UBERON:0001950,6.93e-17,10;UBERON:0000025,1.51e-10,114;UBERON:0001948,2.34e-09,5;UBERON:0002315,2.34e-09,5;UBERON:0004111,2.85e-09,122;UBERON:0002420,3.25e-08,8;UBERON:0007245,3.25e-08,8;UBERON:0010009,3.25e-08,8;UBERON:0010011,3.25e-08,8;UBERON:0000454,3.25e-08,8;UBERON:0002240,1.06e-07,6;UBERON:0005174,1.06e-07,6;UBERON:0001137,1.06e-07,6;UBERON:0011216,2.37e-07,194;UBERON:0000369,9.48e-07,5;UBERON:0002435,9.48e-07,5;UBERON:0000204,9.48e-07,5;UBERON:0010082,9.48e-07,5 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,6.87875966922632,9.52183762689659,6.33831403506179,0,0,0,0,0,0,0,1.76272340924412,2.56511282830212,2.3135745748652,3.42781181284564,2.42955395046775,3.30725157880376,3.06705507258356,1.83843757322004,1.10115880999389,1.0214987046815,0.768032666281217,7.25374582516066,6.31264740856627,8.33461392890816,0.837548997004143,3.93933827022176,1.98637722109853,4.71405736757868,5.41012387036591,5.59198337475902,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0.505524445014783,0.11418387971906,0,0,0.346970653532272,0,0.691846491768175,0.452167921657868,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,2.72280718857492,0,0,0,0,1.3481157546434,0.457500602818626,3.76963056338593,3.99795936442236,2.55715457330331,1.24672826735736,0.648965052271031,0,0,0,0.210441855886474,0.130120442962704,0.459804208866946,1.26043490863744,0.60281927134286,1.63287597963187,1.2811372028485,1.03071897015702,0.776110112217047,0,0.378212160335639,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57492912559016,3.19004298375782,0,0,0.213288250535234,0,0.128867461322093,0,0.22237804384487,0,0.474529061544512,0.164698954724011,0,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.114248512609729,0,0,0.193952487167626,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.642202359951168,0.468846746368813,0,0,1.26203287766503,0,0,0,0,0,1.21443210502468,0.292255857911312,1.18586333383957,6.42642632843614,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,1.70219802876894,0.18006109403131,0.258717367565509,0,0.177340233642274,0.535106452806212,0.987294123612726,0.913394847343798,0,0,0,0,0,0,0,0,0,0.741701208042039,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.216010681643603,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.64751842617067,5.06357760157895,3.43737308063638,4.46818274093588,2.05524755931193,6.0431511791176,4.72515750162264,2.70192721934532,1.81256963593682,4.65984280576638,0.726511433089237,0,0.341467211508268,0.243106717068294,0.209613162627982,1.47074806760011,0.666740183404846,0,1.28367683836726,0.252697211763798,0.50695859978048,0.377252682772152,0.842773567228942,0.89635213366817,0.516919220600519,0,0.579421629724277,1.54327376370964,1.23625770240992,0.294397840268795,0,0.532427418478012,0.238436189947321,0.726732083161643,0.752875043322645,0.761531471025089,1.09756783723664,0.263069711437843,0.814824683075171,0,0.949080144993393,0.886540341380071,0.818462086339379,0.77468420592983,0.578719832943424,3.2475375131933,0.701794825336225,0.429742108096597,0,0.220591419119515,0 | |||
|short_description=p3@Gprin1 | |||
}} |
Revision as of 00:48, 13 September 2013
Short description: | p3@Gprin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Gprin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 43bp_to_ENSMUST00000099506, NM_012014, uc007qpa.1, uc007qpb.1_5end |
EntrezGene: | Gprin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.73e-30 | 23 |
neuroblast (sensu Vertebrata) | 5.73e-30 | 23 |
neuron | 7.18e-25 | 33 |
neuronal stem cell | 7.18e-25 | 33 |
neuroblast | 7.18e-25 | 33 |
electrically signaling cell | 7.18e-25 | 33 |
electrically responsive cell | 5.29e-20 | 39 |
electrically active cell | 5.29e-20 | 39 |
neural cell | 1.60e-17 | 43 |
ectodermal cell | 5.67e-17 | 44 |
neurectodermal cell | 5.67e-17 | 44 |
neuron of cerebral cortex | 1.32e-09 | 6 |
embryonic cell | 2.52e-08 | 70 |
granule cell | 5.31e-07 | 3 |
striatum neuron | 5.55e-07 | 3 |
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