FFCP PHASE1:Mm9::chr15:103333382..103333461,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=18574|HGNC=|MCL_coexpression_id=90|UniProt=Q6PDS5|association_with_transcript=-3bp_to_ENSMUST00000172180_5end|description=CAGE_peak_1_at_Pde1b_5end|id=chr15:103333382..103333461,+|ontology_enrichment_celltype=CL:0000117!1.50e-13!23;CL:0000337!1.50e-13!23;CL:0000540!4.00e-10!33;CL:0000047!4.00e-10!33;CL:0000031!4.00e-10!33;CL:0000404!4.00e-10!33;CL:0000221!2.07e-09!44;CL:0000133!2.07e-09!44;CL:0002319!2.22e-09!43|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-19,23;CL:0000337,1.24e-19,23;CL:0000540,5.93e-13,33;CL:0000047,5.93e-13,33;CL:0000031,5.93e-13,33;CL:0000404,5.93e-13,33;CL:0002319,1.32e-10,43;CL:0000221,3.71e-10,44;CL:0000133,3.71e-10,44;CL:0000393,1.16e-09,39;CL:0000211,1.16e-09,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.27e-26!73;UBERON:0005743!3.27e-26!73;UBERON:0002346!1.69e-25!71;UBERON:0003075!1.69e-25!71;UBERON:0007284!1.69e-25!71;UBERON:0000033!3.08e-25!63;UBERON:0004121!4.43e-25!102;UBERON:0000924!4.43e-25!102;UBERON:0006601!4.43e-25!102;UBERON:0000073!4.62e-25!75;UBERON:0001016!4.62e-25!75;UBERON:0001049!1.38e-23!52;UBERON:0005068!1.38e-23!52;UBERON:0006241!1.38e-23!52;UBERON:0007135!1.38e-23!52;UBERON:0000955!9.96e-23!50;UBERON:0006238!9.96e-23!50;UBERON:0003056!3.46e-22!49;UBERON:0002616!5.25e-22!49;UBERON:0002020!4.06e-19!34;UBERON:0003080!1.65e-18!40;UBERON:0002780!8.03e-18!39;UBERON:0001890!8.03e-18!39;UBERON:0006240!8.03e-18!39;UBERON:0002791!3.46e-16!29;UBERON:0003528!3.46e-16!29;UBERON:0001893!3.46e-16!29;UBERON:0007811!6.44e-15!86;UBERON:0000153!2.62e-14!94;UBERON:0000956!1.78e-11!21;UBERON:0001869!1.78e-11!21;UBERON:0000203!1.78e-11!21;UBERON:0002619!2.14e-09!17;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.86e-34,64;UBERON:0003075,5.86e-34,64;UBERON:0007284,5.86e-34,64;UBERON:0000073,1.11e-31,54;UBERON:0001017,1.24e-30,73;UBERON:0001049,1.88e-29,52;UBERON:0005068,1.88e-29,52;UBERON:0006241,1.88e-29,52;UBERON:0007135,1.88e-29,52;UBERON:0001016,2.85e-29,75;UBERON:0004121,1.32e-28,95;UBERON:0000924,1.32e-28,95;UBERON:0006601,1.32e-28,95;UBERON:0010371,2.48e-27,73;UBERON:0003056,7.90e-27,49;UBERON:0002020,1.69e-26,34;UBERON:0000955,4.86e-25,47;UBERON:0006238,4.86e-25,47;UBERON:0002616,4.97e-24,46;UBERON:0003528,4.23e-22,29;UBERON:0002791,4.23e-22,29;UBERON:0001893,4.23e-22,29;UBERON:0003080,2.20e-21,40;UBERON:0002780,2.07e-20,39;UBERON:0001890,2.07e-20,39;UBERON:0006240,2.07e-20,39;UBERON:0010314,9.10e-18,92;UBERON:0000956,4.61e-15,21;UBERON:0001869,4.61e-15,21;UBERON:0000203,4.61e-15,21;UBERON:0002619,5.84e-12,17;UBERON:0002021,8.18e-11,10;UBERON:0000411,8.18e-11,10;UBERON:0001950,8.18e-11,10;UBERON:0003076,1.86e-08,12;UBERON:0003057,1.86e-08,12;UBERON:0002420,3.07e-08,8;UBERON:0007245,3.07e-08,8;UBERON:0010009,3.07e-08,8;UBERON:0010011,3.07e-08,8;UBERON:0000454,3.07e-08,8|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,9.18467533631554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0.388859798148567,0.419959264876088,4.31257693094915,0,0,0,0,0,0,7.89034197352431,11.6378015439847,9.50747105259269,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,4.61061966385865,4.66603255388149,5.13022565660425,5.04779907243317,15.996455126613,16.7860091123226,2.81728838194394,3.35459148563827,5.51531271966013,39.6417171597799,39.9661368206638,40.5521247796483,8.5726087024626,12.5338071735301,8.85552729946492,35.4562408731754,23.0732670112989,27.9620793431563,19.7401152267357,15.3761415263031,13.4207600994216,0,0.302286240427142,0,0,0,0,0,0,1.96622188184453,0.340860645156116,0,0,0.563373679106722,0,0,0,0,0,0,1.59857431606684,0.517875767294343,0.593768556259299,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,0.117588707135705,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,1.86391761218122,4.09893115816166,4.1889341362691,0.255457055208591,0,0,0,37.5974504906105,355.935468992891,13.5706700281894,59.6217418259508,66.7417343632163,49.6613426497349,110.648541412211,0.407357455401265,0,0,2.10441855886474,1.04096354370163,1.83921683546778,3.24111833649629,2.86339153887859,3.53789795586905,3.97152532883034,3.37326208415024,7.50239775143145,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.393528463494808,0.617068451549513,0,0.536546802799238,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0.439100230582101,0,41.6374098156972,7.40913209130848,0,0,0.213288250535234,0,0,0.201683524623343,0,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.795825888164603,0.58489226135736,0.898819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| ||
|EntrezGene=18574 | |||
|HGNC= | |||
|MCL_coexpression_id=90 | |||
|UniProt=Q6PDS5 | |||
|association_with_transcript=-3bp_to_ENSMUST00000172180_5end | |||
|description=CAGE_peak_1_at_Pde1b_5end | |||
|id=chr15:103333382..103333461,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.50e-13!23;CL:0000337!1.50e-13!23;CL:0000540!4.00e-10!33;CL:0000047!4.00e-10!33;CL:0000031!4.00e-10!33;CL:0000404!4.00e-10!33;CL:0000221!2.07e-09!44;CL:0000133!2.07e-09!44;CL:0002319!2.22e-09!43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.24e-19,23;CL:0000337,1.24e-19,23;CL:0000540,5.93e-13,33;CL:0000047,5.93e-13,33;CL:0000031,5.93e-13,33;CL:0000404,5.93e-13,33;CL:0002319,1.32e-10,43;CL:0000221,3.71e-10,44;CL:0000133,3.71e-10,44;CL:0000393,1.16e-09,39;CL:0000211,1.16e-09,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.27e-26!73;UBERON:0005743!3.27e-26!73;UBERON:0002346!1.69e-25!71;UBERON:0003075!1.69e-25!71;UBERON:0007284!1.69e-25!71;UBERON:0000033!3.08e-25!63;UBERON:0004121!4.43e-25!102;UBERON:0000924!4.43e-25!102;UBERON:0006601!4.43e-25!102;UBERON:0000073!4.62e-25!75;UBERON:0001016!4.62e-25!75;UBERON:0001049!1.38e-23!52;UBERON:0005068!1.38e-23!52;UBERON:0006241!1.38e-23!52;UBERON:0007135!1.38e-23!52;UBERON:0000955!9.96e-23!50;UBERON:0006238!9.96e-23!50;UBERON:0003056!3.46e-22!49;UBERON:0002616!5.25e-22!49;UBERON:0002020!4.06e-19!34;UBERON:0003080!1.65e-18!40;UBERON:0002780!8.03e-18!39;UBERON:0001890!8.03e-18!39;UBERON:0006240!8.03e-18!39;UBERON:0002791!3.46e-16!29;UBERON:0003528!3.46e-16!29;UBERON:0001893!3.46e-16!29;UBERON:0007811!6.44e-15!86;UBERON:0000153!2.62e-14!94;UBERON:0000956!1.78e-11!21;UBERON:0001869!1.78e-11!21;UBERON:0000203!1.78e-11!21;UBERON:0002619!2.14e-09!17;UBERON:0002021!1.07e-07!10;UBERON:0000411!1.07e-07!10;UBERON:0001950!1.07e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.86e-34,64;UBERON:0003075,5.86e-34,64;UBERON:0007284,5.86e-34,64;UBERON:0000073,1.11e-31,54;UBERON:0001017,1.24e-30,73;UBERON:0001049,1.88e-29,52;UBERON:0005068,1.88e-29,52;UBERON:0006241,1.88e-29,52;UBERON:0007135,1.88e-29,52;UBERON:0001016,2.85e-29,75;UBERON:0004121,1.32e-28,95;UBERON:0000924,1.32e-28,95;UBERON:0006601,1.32e-28,95;UBERON:0010371,2.48e-27,73;UBERON:0003056,7.90e-27,49;UBERON:0002020,1.69e-26,34;UBERON:0000955,4.86e-25,47;UBERON:0006238,4.86e-25,47;UBERON:0002616,4.97e-24,46;UBERON:0003528,4.23e-22,29;UBERON:0002791,4.23e-22,29;UBERON:0001893,4.23e-22,29;UBERON:0003080,2.20e-21,40;UBERON:0002780,2.07e-20,39;UBERON:0001890,2.07e-20,39;UBERON:0006240,2.07e-20,39;UBERON:0010314,9.10e-18,92;UBERON:0000956,4.61e-15,21;UBERON:0001869,4.61e-15,21;UBERON:0000203,4.61e-15,21;UBERON:0002619,5.84e-12,17;UBERON:0002021,8.18e-11,10;UBERON:0000411,8.18e-11,10;UBERON:0001950,8.18e-11,10;UBERON:0003076,1.86e-08,12;UBERON:0003057,1.86e-08,12;UBERON:0002420,3.07e-08,8;UBERON:0007245,3.07e-08,8;UBERON:0010009,3.07e-08,8;UBERON:0010011,3.07e-08,8;UBERON:0000454,3.07e-08,8 | |||
|phase1_expression=0.80074423552397,0,0,0,0,0,0.233612640595526,0,0.140788722151667,0.234064526321993,0,0,0,0,0.333109761815663,0.202475267389826,0,0.315462165358238,0.274228867211478,0.42438965179803,9.18467533631554,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0.523523743973798,0,0,0,0,0,0,0,1.09012578190223,0.439372365468944,0.388859798148567,0.419959264876088,4.31257693094915,0,0,0,0,0,0,7.89034197352431,11.6378015439847,9.50747105259269,0.338844532069132,0.889294796111139,0,0,0,0.599200221036809,4.61061966385865,4.66603255388149,5.13022565660425,5.04779907243317,15.996455126613,16.7860091123226,2.81728838194394,3.35459148563827,5.51531271966013,39.6417171597799,39.9661368206638,40.5521247796483,8.5726087024626,12.5338071735301,8.85552729946492,35.4562408731754,23.0732670112989,27.9620793431563,19.7401152267357,15.3761415263031,13.4207600994216,0,0.302286240427142,0,0,0,0,0,0,1.96622188184453,0.340860645156116,0,0,0.563373679106722,0,0,0,0,0,0,1.59857431606684,0.517875767294343,0.593768556259299,0.173485326766136,0.304465478312141,0.691846491768175,0.60289056221049,0.117588707135705,0.879666139307728,0,0.289198713839823,0,0.161766849947409,0.220841518460394,0,1.86391761218122,4.09893115816166,4.1889341362691,0.255457055208591,0,0,0,37.5974504906105,355.935468992891,13.5706700281894,59.6217418259508,66.7417343632163,49.6613426497349,110.648541412211,0.407357455401265,0,0,2.10441855886474,1.04096354370163,1.83921683546778,3.24111833649629,2.86339153887859,3.53789795586905,3.97152532883034,3.37326208415024,7.50239775143145,0,0.189106080167819,0.351902248327898,0.219195732427575,0.834141747676794,0.348252166522167,0.823128545631774,0.199034266818493,0,0,0,0.207125772535502,0,0.180062061461015,0.23674473558521,0.393528463494808,0.617068451549513,0,0.536546802799238,0.116765342367169,0,0.164167464079095,0.162137619091711,0,0.439100230582101,0,41.6374098156972,7.40913209130848,0,0,0.213288250535234,0,0,0.201683524623343,0,0.570676878337677,0.474529061544512,0.329397909448022,0.251335208800269,0.795825888164603,0.58489226135736,0.898819408654221,0.648414149624083,0.398282546508734,0.569003702859245,0.685491075658373,0,0.407302655690628,0,0.0701358198903186,0.0632365371242573,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0.624075346229121,0,0,0,0.184753190166605,0,0,0,0,0,0.476087281772027,0,0.157635144106191,0,0,0.655453258862952,0.345369963731791,0.578596234326046,0,0.54390568381871,0.491764273019036,0,30.6651626876683,26.1382061100613,0,0.252470927204373,0.315508219416257,0,1.29254038639679,0,0.222798674082394,0.566153061577665,0,0.584511715822624,1.18586333383957,37.9159153377732,0.567760340833074,0.178065603667255,0.651547837414304,0.989820737835213,1.32745138339963,0,0,0,0,0,0,0,0,0.316036757935816,0,0,1.70219802876894,0.36012218806262,1.03486947026204,0.857348140126369,0.532020700926821,0.891844088010353,0.493647061806363,1.522324745573,0,0,0.220528398054962,0.32977250588296,0.645857706783622,0.542816324353403,0.119372344003136,0,0.291480836629851,33.7474049659128,0.341741761595705,0,0.370389054739423,0,0.27338845544205,0.457556346413045,0.339956859987711,0.139951452323658,0.138199973804424,0,0.632671987162271,0.406638934253697,0.86404272657441,0.836353184057875,0.655087691238533,0.809186078308924,0.826534557253359,1.30877970992015,0.259229946583586,0,0,0,0.165458490457098,0.194451188344048,0.516639293910924,0,0,0.39061315453185,1.25831213310853,0.241584120826006,0,1.26404448251271,0.202725215290164,0.308132871494482,0.129920822977795,0,0.39736270956253,0.240390899039938,0,0.100966449948148,0.15241361331,0.201652370273681,0.0974578807397524,0.192423683280659,0.350630706544707,0.226730383615211,0,0,0,1.73870634628971,0,0,0.428736758158132,0,32.1908550291728,28.0798394269378,30.9363577257274,16.1541991403066,34.2541259885321,41.5466643564335,36.4512150125175,45.9327627288705,29.0011141749891,36.2432218226274,0.93408612825759,1.19707462020309,1.02440163452481,0.729320151204882,1.04806581313991,3.12533964365024,2.00022055021454,2.47242068686673,1.28367683836726,2.02157769411038,1.52087579934144,2.82939512079114,1.40462261204824,2.04880487695582,1.26358031702349,1.42888107384922,1.97003354106254,2.12200142510076,2.47251540481984,1.91358596174717,2.40008476669791,2.12970967391205,0.953744759789284,2.18019624948493,1.31753132581463,1.69229215783353,2.19513567447327,1.31534855718921,1.7654534799962,0.561142271657738,1.42362021749009,1.57607171800902,1.22769312950907,1.23949472948773,2.12197272079256,4.99621155875892,1.87145286756327,2.14871054048298,0.382576664137687,1.54413993383661,0.463735671240843 | |||
|short_description=p1@Pde1b | |||
}} |
Revision as of 10:11, 13 September 2013
Short description: | p1@Pde1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pde1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:90 |
Association with transcript: | -3bp_to_ENSMUST00000172180_5end |
EntrezGene: | Pde1b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.24e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.24e-19 | 23 |
neuron | 5.93e-13 | 33 |
neuronal stem cell | 5.93e-13 | 33 |
neuroblast | 5.93e-13 | 33 |
electrically signaling cell | 5.93e-13 | 33 |
neural cell | 1.32e-10 | 43 |
ectodermal cell | 3.71e-10 | 44 |
neurectodermal cell | 3.71e-10 | 44 |
electrically responsive cell | 1.16e-09 | 39 |
electrically active cell | 1.16e-09 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.