FFCP PHASE1:Mm9::chr15:80003700..80003730,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=17309|HGNC=|MCL_coexpression_id=1|UniProt=Q5RKT9|association_with_transcript=-420bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end|description=CAGE_peak_4_at_Mgat3_5end|id=chr15:80003700..80003730,+|ontology_enrichment_celltype=CL:0000117!3.95e-13!23;CL:0000337!3.95e-13!23;CL:0000540!5.32e-13!33;CL:0000047!5.32e-13!33;CL:0000031!5.32e-13!33;CL:0000404!5.32e-13!33;CL:0002319!8.56e-11!43;CL:0000393!1.97e-10!39;CL:0000211!1.97e-10!39;CL:0000221!2.17e-10!44;CL:0000133!2.17e-10!44;CL:0000055!2.26e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.54e-17,23;CL:0000337,5.54e-17,23;CL:0000540,5.96e-17,33;CL:0000047,5.96e-17,33;CL:0000031,5.96e-17,33;CL:0000404,5.96e-17,33;CL:0000393,1.77e-12,39;CL:0000211,1.77e-12,39;CL:0002319,9.84e-12,43;CL:0000221,3.38e-11,44;CL:0000133,3.38e-11,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.25e-24!73;UBERON:0005743!1.25e-24!73;UBERON:0000073!1.48e-23!75;UBERON:0001016!1.48e-23!75;UBERON:0001049!1.72e-19!52;UBERON:0005068!1.72e-19!52;UBERON:0006241!1.72e-19!52;UBERON:0007135!1.72e-19!52;UBERON:0000955!1.77e-18!50;UBERON:0006238!1.77e-18!50;UBERON:0002616!7.34e-18!49;UBERON:0002346!3.23e-17!71;UBERON:0003075!3.23e-17!71;UBERON:0007284!3.23e-17!71;UBERON:0002020!3.99e-17!34;UBERON:0004121!1.17e-15!102;UBERON:0000924!1.17e-15!102;UBERON:0006601!1.17e-15!102;UBERON:0000033!4.92e-15!63;UBERON:0002791!4.33e-14!29;UBERON:0003528!4.33e-14!29;UBERON:0001893!4.33e-14!29;UBERON:0003080!1.04e-13!40;UBERON:0002780!4.37e-13!39;UBERON:0001890!4.37e-13!39;UBERON:0006240!4.37e-13!39;UBERON:0003056!4.29e-12!49;UBERON:0000956!8.30e-10!21;UBERON:0001869!8.30e-10!21;UBERON:0000203!8.30e-10!21;UBERON:0002619!3.11e-08!17;UBERON:0007811!9.43e-08!86;UBERON:0002021!2.31e-07!10;UBERON:0000411!2.31e-07!10;UBERON:0001950!2.31e-07!10;UBERON:0000153!5.11e-07!94;UBERON:0000468!5.35e-07!333|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.33e-28,73;UBERON:0001016,3.52e-27,75;UBERON:0000073,2.53e-24,54;UBERON:0001049,2.04e-22,52;UBERON:0005068,2.04e-22,52;UBERON:0006241,2.04e-22,52;UBERON:0007135,2.04e-22,52;UBERON:0002020,9.44e-22,34;UBERON:0002346,6.98e-19,64;UBERON:0003075,6.98e-19,64;UBERON:0007284,6.98e-19,64;UBERON:0000955,1.47e-18,47;UBERON:0006238,1.47e-18,47;UBERON:0004121,3.03e-18,95;UBERON:0000924,3.03e-18,95;UBERON:0006601,3.03e-18,95;UBERON:0002616,8.56e-18,46;UBERON:0003528,1.02e-17,29;UBERON:0002791,1.02e-17,29;UBERON:0001893,1.02e-17,29;UBERON:0003080,3.08e-16,40;UBERON:0002780,1.97e-15,39;UBERON:0001890,1.97e-15,39;UBERON:0006240,1.97e-15,39;UBERON:0010371,2.93e-14,73;UBERON:0011216,6.54e-14,194;UBERON:0003056,1.05e-12,49;UBERON:0000956,4.85e-12,21;UBERON:0001869,4.85e-12,21;UBERON:0000203,4.85e-12,21;UBERON:0002619,6.00e-10,17;UBERON:0010314,2.28e-09,92;UBERON:0002021,2.67e-09,10;UBERON:0000411,2.67e-09,10;UBERON:0001950,2.67e-09,10;UBERON:0002420,5.60e-07,8;UBERON:0007245,5.60e-07,8;UBERON:0010009,5.60e-07,8;UBERON:0010011,5.60e-07,8;UBERON:0000454,5.60e-07,8;UBERON:0003076,7.02e-07,12;UBERON:0003057,7.02e-07,12|phase1_expression=0.320297694209588,0.697950815278722,1.81999695755814,5.14189159221611,3.50627010962443,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0.0992909512008853,0,0.799962113967033,0.45881856213434,0,0.430761996159075,0.646413698057667,2.09025761402011,0.252030129759931,0,0,0,0,0.288851619751275,0.831173226792462,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.734187008646726,0.782391344348039,0.872100625521786,0.659058548203415,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,3.84401275633236,8.46385566835253,8.23980824558033,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,1.15265491596466,1.76272340924412,2.8351247049655,1.68259969081106,10.8547374073445,5.96345060569357,2.08234358665422,2.1086003624012,3.67687514644008,16.5173821499083,8.68273898979276,8.29475279583715,4.2203612073662,5.85520919055422,3.64639359389732,9.49222196604695,7.31591393041184,9.47349136216223,10.606629077052,7.83044244395066,3.72798891650601,0.075726193333184,0.453429360640713,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,2.81438353314578,1.26679932737549,5.05524445014783,0.91347103775248,0,1.33597925158342,0.520455980298408,1.52232739156071,0.230615497256059,0.60289056221049,1.17588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0.484875253135222,5.59175283654366,9.36898550436951,7.95897485891129,2.04365644166873,0,0,0,8.98743836428936,7.32000964509802,2.51308704225729,10.4294592115366,8.43861009190091,8.10373373782284,4.38051410282946,0.203678727700633,0.248813941220186,0.252722758433675,1.05220927943237,0.650602214813519,0.459804208866946,0.900310649026746,1.05493372485001,0.272145996605311,0.2562274405697,0.468508622798644,1.03481348295606,0.431135985865684,0.189106080167819,0.703804496655795,1.31517439456545,1.11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| ||
|EntrezGene=17309 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q5RKT9 | |||
|association_with_transcript=-420bp_to_ENSMUST00000044970,NM_010795,uc007wvf.1_5end | |||
|description=CAGE_peak_4_at_Mgat3_5end | |||
|id=chr15:80003700..80003730,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.95e-13!23;CL:0000337!3.95e-13!23;CL:0000540!5.32e-13!33;CL:0000047!5.32e-13!33;CL:0000031!5.32e-13!33;CL:0000404!5.32e-13!33;CL:0002319!8.56e-11!43;CL:0000393!1.97e-10!39;CL:0000211!1.97e-10!39;CL:0000221!2.17e-10!44;CL:0000133!2.17e-10!44;CL:0000055!2.26e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.54e-17,23;CL:0000337,5.54e-17,23;CL:0000540,5.96e-17,33;CL:0000047,5.96e-17,33;CL:0000031,5.96e-17,33;CL:0000404,5.96e-17,33;CL:0000393,1.77e-12,39;CL:0000211,1.77e-12,39;CL:0002319,9.84e-12,43;CL:0000221,3.38e-11,44;CL:0000133,3.38e-11,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.25e-24!73;UBERON:0005743!1.25e-24!73;UBERON:0000073!1.48e-23!75;UBERON:0001016!1.48e-23!75;UBERON:0001049!1.72e-19!52;UBERON:0005068!1.72e-19!52;UBERON:0006241!1.72e-19!52;UBERON:0007135!1.72e-19!52;UBERON:0000955!1.77e-18!50;UBERON:0006238!1.77e-18!50;UBERON:0002616!7.34e-18!49;UBERON:0002346!3.23e-17!71;UBERON:0003075!3.23e-17!71;UBERON:0007284!3.23e-17!71;UBERON:0002020!3.99e-17!34;UBERON:0004121!1.17e-15!102;UBERON:0000924!1.17e-15!102;UBERON:0006601!1.17e-15!102;UBERON:0000033!4.92e-15!63;UBERON:0002791!4.33e-14!29;UBERON:0003528!4.33e-14!29;UBERON:0001893!4.33e-14!29;UBERON:0003080!1.04e-13!40;UBERON:0002780!4.37e-13!39;UBERON:0001890!4.37e-13!39;UBERON:0006240!4.37e-13!39;UBERON:0003056!4.29e-12!49;UBERON:0000956!8.30e-10!21;UBERON:0001869!8.30e-10!21;UBERON:0000203!8.30e-10!21;UBERON:0002619!3.11e-08!17;UBERON:0007811!9.43e-08!86;UBERON:0002021!2.31e-07!10;UBERON:0000411!2.31e-07!10;UBERON:0001950!2.31e-07!10;UBERON:0000153!5.11e-07!94;UBERON:0000468!5.35e-07!333 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.33e-28,73;UBERON:0001016,3.52e-27,75;UBERON:0000073,2.53e-24,54;UBERON:0001049,2.04e-22,52;UBERON:0005068,2.04e-22,52;UBERON:0006241,2.04e-22,52;UBERON:0007135,2.04e-22,52;UBERON:0002020,9.44e-22,34;UBERON:0002346,6.98e-19,64;UBERON:0003075,6.98e-19,64;UBERON:0007284,6.98e-19,64;UBERON:0000955,1.47e-18,47;UBERON:0006238,1.47e-18,47;UBERON:0004121,3.03e-18,95;UBERON:0000924,3.03e-18,95;UBERON:0006601,3.03e-18,95;UBERON:0002616,8.56e-18,46;UBERON:0003528,1.02e-17,29;UBERON:0002791,1.02e-17,29;UBERON:0001893,1.02e-17,29;UBERON:0003080,3.08e-16,40;UBERON:0002780,1.97e-15,39;UBERON:0001890,1.97e-15,39;UBERON:0006240,1.97e-15,39;UBERON:0010371,2.93e-14,73;UBERON:0011216,6.54e-14,194;UBERON:0003056,1.05e-12,49;UBERON:0000956,4.85e-12,21;UBERON:0001869,4.85e-12,21;UBERON:0000203,4.85e-12,21;UBERON:0002619,6.00e-10,17;UBERON:0010314,2.28e-09,92;UBERON:0002021,2.67e-09,10;UBERON:0000411,2.67e-09,10;UBERON:0001950,2.67e-09,10;UBERON:0002420,5.60e-07,8;UBERON:0007245,5.60e-07,8;UBERON:0010009,5.60e-07,8;UBERON:0010011,5.60e-07,8;UBERON:0000454,5.60e-07,8;UBERON:0003076,7.02e-07,12;UBERON:0003057,7.02e-07,12 | |||
|phase1_expression=0.320297694209588,0.697950815278722,1.81999695755814,5.14189159221611,3.50627010962443,0.839396359559449,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,1.9559956734746,0.0992909512008853,0,0.799962113967033,0.45881856213434,0,0.430761996159075,0.646413698057667,2.09025761402011,0.252030129759931,0,0,0,0,0.288851619751275,0.831173226792462,0,0,0,0,0,0,0,0.503587271902309,0.202753862439029,0.734187008646726,0.782391344348039,0.872100625521786,0.659058548203415,0.194429899074283,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,3.84401275633236,8.46385566835253,8.23980824558033,0.338844532069132,0.889294796111139,0,0,0,0.898800331555214,1.15265491596466,1.76272340924412,2.8351247049655,1.68259969081106,10.8547374073445,5.96345060569357,2.08234358665422,2.1086003624012,3.67687514644008,16.5173821499083,8.68273898979276,8.29475279583715,4.2203612073662,5.85520919055422,3.64639359389732,9.49222196604695,7.31591393041184,9.47349136216223,10.606629077052,7.83044244395066,3.72798891650601,0.075726193333184,0.453429360640713,0.579728977403356,0,0,0,0,0,0.561777680527007,0,0.259786004602869,0.35333957451034,0.281686839553361,0,0,0,2.81438353314578,1.26679932737549,5.05524445014783,0.91347103775248,0,1.33597925158342,0.520455980298408,1.52232739156071,0.230615497256059,0.60289056221049,1.17588707135705,0.125666591329675,0.247194967734374,0.144599356919912,0,0,0.220841518460394,0.484875253135222,5.59175283654366,9.36898550436951,7.95897485891129,2.04365644166873,0,0,0,8.98743836428936,7.32000964509802,2.51308704225729,10.4294592115366,8.43861009190091,8.10373373782284,4.38051410282946,0.203678727700633,0.248813941220186,0.252722758433675,1.05220927943237,0.650602214813519,0.459804208866946,0.900310649026746,1.05493372485001,0.272145996605311,0.2562274405697,0.468508622798644,1.03481348295606,0.431135985865684,0.189106080167819,0.703804496655795,1.31517439456545,1.11218899690239,0.348252166522167,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.234526059981096,0,0.23674473558521,0,0.617068451549513,0.232533944750408,0,0,0,0,0.162137619091711,0.146199987425332,0.439100230582101,0.268412837520744,8.62188789112922,3.91037527041281,1.32167513193519,1.05780226665418,0.853153002140936,1.16118335930219,1.15980715189884,1.21010114774006,1.55664630691409,0.760902504450237,1.42358718463353,1.15289268306808,1.00534083520108,1.1937388322469,0.779856348476481,0.898819408654221,1.29682829924817,1.7922714592893,0.189667900953082,0.685491075658373,0,1.62921062276251,1.16371492300575,0.280543279561274,0.885311519739602,2.21415221969403,2.35498091762062,2.59134044235781,0,0.333690211432188,0.589676985339609,0.899448449539415,0.608580364165509,0.72353147925725,0.25462585178142,0.575392274901621,0,0.274561413188081,0,0,0.312037673114561,0,0,0,2.21703828199926,0.189491411770485,0.488894929326078,0.509235257325564,0.704070744865506,1.67506257441816,2.14239276797412,1.17080188714679,0.472905432318573,1.10732344824387,1.2756381492599,0.327726629431476,0.518054945597687,0.867894351489069,0,0,0,0,7.86697890940181,6.68106613575558,0.163934945376675,0,1.57754109708128,0.390438744296638,3.23135096599198,1.67278158566786,3.11918143715352,1.69845918473299,0,1.75353514746787,2.76701444562566,8.03303291054518,0.141940085208269,1.6025904330053,0.325773918707152,0.494910368917606,0,1.45668381692989,0.604647113929502,0.188605079755898,0,0.614870295887855,0.775284879504663,0.363533729477506,0,0,1.05418608574999,0,0,0.36012218806262,1.16422815404479,0.857348140126369,0.354680467284547,1.24858172321449,1.48094118541909,0.608929898229199,0.704015124191131,0.847328283455281,0,0,0,0.180938774784468,0.119372344003136,0,1.45740418314925,6.30446026835733,0,1.03193433981611,0.555583582109135,0,0.27338845544205,0,0,0,0,3.81868247206045,1.42351197111511,1.62655573701479,1.72808545314882,2.09088296014469,1.9652630737156,2.02296519577231,0.909188012978695,1.83229159388821,1.68499465279331,0,0,0,0.330916980914195,0.583353565032143,0.387479470433193,0.844780627453891,1.05621514781179,0.5208175393758,0.209718688851422,0,0,0.632022241256357,0.202725215290164,0.616265742988964,1.16928740680016,0.895133478337407,0.993406773906324,0.240390899039938,1.47689527174577,0.201932899896295,0.304827226619999,0.604957110821043,0.38983152295901,0,0.350630706544707,0.906921534460845,0,0,0,4.056981474676,0.375364950902364,0.36630324853453,0.428736758158132,0,10.1655331671072,10.1271552031579,9.16632821503035,18.9038500578056,8.22099023724771,7.55393897389701,6.75022500231806,6.75481804836331,5.43770890781046,6.21312374102184,0.31136204275253,1.99512436700516,0.682934423016537,0.972426868273176,0.628839487883947,0.367687016900028,1.77797382241292,2.06035057238894,1.92551525755089,0.505394423527595,0.50695859978048,1.13175804831646,0.749132059759059,1.02440243847791,0.976402972245426,2.38146845641537,0.579421629724277,1.15745532278223,2.06042950401653,1.47198920134397,0.342869252385415,1.4198064492747,1.43061713968393,1.5988105829556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| |||
|short_description=p4@Mgat3 | |||
}} |
Revision as of 11:14, 13 September 2013
Short description: | p4@Mgat3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Mgat3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -420bp_to_ENSMUST00000044970, NM_010795, uc007wvf.1_5end |
EntrezGene: | Mgat3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.54e-17 | 23 |
neuroblast (sensu Vertebrata) | 5.54e-17 | 23 |
neuron | 5.96e-17 | 33 |
neuronal stem cell | 5.96e-17 | 33 |
neuroblast | 5.96e-17 | 33 |
electrically signaling cell | 5.96e-17 | 33 |
electrically responsive cell | 1.77e-12 | 39 |
electrically active cell | 1.77e-12 | 39 |
neural cell | 9.84e-12 | 43 |
ectodermal cell | 3.38e-11 | 44 |
neurectodermal cell | 3.38e-11 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.