FFCP PHASE1:Mm9::chr15:95485240..95485257,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=223843|HGNC=|UniProt=F8VQH7,Q8BZD0|association_with_transcript=-38bp_to_NM_207533,uc007xjs.1_5end|description=CAGE_peak_1_at_Dbx2_5end|id=chr15:95485240..95485257,-|ontology_enrichment_celltype=CL:0000117!5.49e-10!23;CL:0000337!5.49e-10!23;CL:0000221!8.00e-10!44;CL:0000133!8.00e-10!44;CL:0002319!3.32e-09!43;CL:0000055!6.78e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,3.36e-10,23;CL:0000337,3.36e-10,23;CL:0000221,2.10e-09,44;CL:0000133,2.10e-09,44;CL:0002319,1.55e-08,43;CL:0002610,6.21e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.03e-26!73;UBERON:0005743!2.03e-26!73;UBERON:0000073!2.97e-25!75;UBERON:0001016!2.97e-25!75;UBERON:0001049!8.67e-22!52;UBERON:0005068!8.67e-22!52;UBERON:0006241!8.67e-22!52;UBERON:0007135!8.67e-22!52;UBERON:0000955!8.96e-20!50;UBERON:0006238!8.96e-20!50;UBERON:0002020!3.30e-19!34;UBERON:0002616!5.87e-19!49;UBERON:0000033!9.57e-19!63;UBERON:0004121!3.99e-18!102;UBERON:0000924!3.99e-18!102;UBERON:0006601!3.99e-18!102;UBERON:0000153!7.13e-16!94;UBERON:0002346!1.14e-15!71;UBERON:0003075!1.14e-15!71;UBERON:0007284!1.14e-15!71;UBERON:0002791!2.15e-14!29;UBERON:0003528!2.15e-14!29;UBERON:0001893!2.15e-14!29;UBERON:0003080!5.88e-13!40;UBERON:0003056!4.05e-12!49;UBERON:0002780!4.65e-12!39;UBERON:0001890!4.65e-12!39;UBERON:0006240!4.65e-12!39;UBERON:0002619!9.41e-12!17;UBERON:0002021!5.60e-11!10;UBERON:0000411!5.60e-11!10;UBERON:0001950!5.60e-11!10;UBERON:0007811!7.92e-11!86;UBERON:0003076!2.07e-10!12;UBERON:0003057!2.07e-10!12;UBERON:0000956!4.16e-10!21;UBERON:0001869!4.16e-10!21;UBERON:0000203!4.16e-10!21;UBERON:0002102!3.88e-08!8;UBERON:0004710!3.88e-08!8;UBERON:0005419!3.88e-08!8;UBERON:0005417!3.88e-08!8;UBERON:0005729!3.88e-08!8;UBERON:0002240!1.80e-07!6;UBERON:0005174!1.80e-07!6;UBERON:0001137!1.80e-07!6;UBERON:0002298!2.63e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.63e-31,73;UBERON:0001016,9.77e-30,75;UBERON:0000073,1.62e-29,54;UBERON:0001049,2.25e-26,52;UBERON:0005068,2.25e-26,52;UBERON:0006241,2.25e-26,52;UBERON:0007135,2.25e-26,52;UBERON:0004121,4.71e-23,95;UBERON:0000924,4.71e-23,95;UBERON:0006601,4.71e-23,95;UBERON:0002346,4.71e-20,64;UBERON:0003075,4.71e-20,64;UBERON:0007284,4.71e-20,64;UBERON:0002020,1.06e-19,34;UBERON:0000955,6.02e-19,47;UBERON:0006238,6.02e-19,47;UBERON:0003076,4.63e-18,12;UBERON:0003057,4.63e-18,12;UBERON:0010371,4.78e-18,73;UBERON:0002616,9.64e-18,46;UBERON:0002021,1.41e-15,10;UBERON:0000411,1.41e-15,10;UBERON:0001950,1.41e-15,10;UBERON:0002102,8.55e-13,7;UBERON:0004710,8.55e-13,7;UBERON:0005419,8.55e-13,7;UBERON:0005417,8.55e-13,7;UBERON:0005729,8.55e-13,7;UBERON:0010314,8.59e-13,92;UBERON:0003528,1.49e-12,29;UBERON:0002791,1.49e-12,29;UBERON:0001893,1.49e-12,29;UBERON:0003080,1.88e-12,40;UBERON:0002240,2.71e-12,6;UBERON:0005174,2.71e-12,6;UBERON:0001137,2.71e-12,6;UBERON:0002780,3.50e-11,39;UBERON:0001890,3.50e-11,39;UBERON:0006240,3.50e-11,39;UBERON:0010708,4.62e-11,8;UBERON:0002619,1.42e-10,17;UBERON:0001948,1.42e-10,5;UBERON:0002315,1.42e-10,5;UBERON:0000956,6.59e-10,21;UBERON:0001869,6.59e-10,21;UBERON:0000203,6.59e-10,21;UBERON:0003056,2.37e-09,49;UBERON:0002950,1.86e-08,4;UBERON:0001891,1.86e-08,4;UBERON:0009616,1.86e-08,4;UBERON:0010286,1.86e-08,4;UBERON:0000025,3.79e-08,114;UBERON:0004111,6.96e-08,122;UBERON:0004733,1.34e-07,6;UBERON:0004732,1.34e-07,6;UBERON:0002028,1.34e-07,6;UBERON:0007277,1.34e-07,6;UBERON:0000026,5.04e-07,12;UBERON:0004708,5.04e-07,12;UBERON:0002101,5.04e-07,12;UBERON:0004357,5.04e-07,12;UBERON:0004347,5.04e-07,12;UBERON:0005732,5.04e-07,12;UBERON:0005733,5.04e-07,12;UBERON:0004684,6.21e-07,3;UBERON:0002275,6.21e-07,3;UBERON:0011216,9.02e-07,194|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.439372365468944,0.388859798148567,0.979904951377538,5.75010257459886,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,4.79360176829448,6.53171119046643,0,0,0,6.28432165688368,7.95126747425809,0.122490799214954,0,0,4.40463523997555,3.57524546638526,3.84016333140609,0.527545150920775,0.457438218012048,0,1.67509799400829,2.8138130501584,4.5839474333043,5.00868595305235,2.70506193518296,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,1.46612694769419,0,0,0,0,5.24267237916879,2.74500361691176,0.251308704225729,3.12883776346098,2.81287003063364,3.1168206683934,3.24482526135515,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,1.07783996466421,2.08016688184601,10.0292140773451,3.72632745126877,4.44875598760957,2.089512999133,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04695876553905,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97706828962155,2.81308047821288,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,4.60325236507177,4.58316410751517,6.35856774671644,2.74033007908257,3.0215755895588,0.675022500231806,4.05289082901798,2.71885445390523,4.65984280576638,0.207574695168353,0.399024873401031,0.341467211508268,0.486213434136588,0,0.367687016900028,0,0.412070114477788,0,0,0,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,0,0,0,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.394017929502254,0,0,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421|short_description=p1@Dbx2}} | ||
|EntrezGene=223843 | |||
|HGNC= | |||
|UniProt=F8VQH7,Q8BZD0 | |||
|association_with_transcript=-38bp_to_NM_207533,uc007xjs.1_5end | |||
|description=CAGE_peak_1_at_Dbx2_5end | |||
|id=chr15:95485240..95485257,- | |||
|ontology_enrichment_celltype=CL:0000117!5.49e-10!23;CL:0000337!5.49e-10!23;CL:0000221!8.00e-10!44;CL:0000133!8.00e-10!44;CL:0002319!3.32e-09!43;CL:0000055!6.78e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.36e-10,23;CL:0000337,3.36e-10,23;CL:0000221,2.10e-09,44;CL:0000133,2.10e-09,44;CL:0002319,1.55e-08,43;CL:0002610,6.21e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.03e-26!73;UBERON:0005743!2.03e-26!73;UBERON:0000073!2.97e-25!75;UBERON:0001016!2.97e-25!75;UBERON:0001049!8.67e-22!52;UBERON:0005068!8.67e-22!52;UBERON:0006241!8.67e-22!52;UBERON:0007135!8.67e-22!52;UBERON:0000955!8.96e-20!50;UBERON:0006238!8.96e-20!50;UBERON:0002020!3.30e-19!34;UBERON:0002616!5.87e-19!49;UBERON:0000033!9.57e-19!63;UBERON:0004121!3.99e-18!102;UBERON:0000924!3.99e-18!102;UBERON:0006601!3.99e-18!102;UBERON:0000153!7.13e-16!94;UBERON:0002346!1.14e-15!71;UBERON:0003075!1.14e-15!71;UBERON:0007284!1.14e-15!71;UBERON:0002791!2.15e-14!29;UBERON:0003528!2.15e-14!29;UBERON:0001893!2.15e-14!29;UBERON:0003080!5.88e-13!40;UBERON:0003056!4.05e-12!49;UBERON:0002780!4.65e-12!39;UBERON:0001890!4.65e-12!39;UBERON:0006240!4.65e-12!39;UBERON:0002619!9.41e-12!17;UBERON:0002021!5.60e-11!10;UBERON:0000411!5.60e-11!10;UBERON:0001950!5.60e-11!10;UBERON:0007811!7.92e-11!86;UBERON:0003076!2.07e-10!12;UBERON:0003057!2.07e-10!12;UBERON:0000956!4.16e-10!21;UBERON:0001869!4.16e-10!21;UBERON:0000203!4.16e-10!21;UBERON:0002102!3.88e-08!8;UBERON:0004710!3.88e-08!8;UBERON:0005419!3.88e-08!8;UBERON:0005417!3.88e-08!8;UBERON:0005729!3.88e-08!8;UBERON:0002240!1.80e-07!6;UBERON:0005174!1.80e-07!6;UBERON:0001137!1.80e-07!6;UBERON:0002298!2.63e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.63e-31,73;UBERON:0001016,9.77e-30,75;UBERON:0000073,1.62e-29,54;UBERON:0001049,2.25e-26,52;UBERON:0005068,2.25e-26,52;UBERON:0006241,2.25e-26,52;UBERON:0007135,2.25e-26,52;UBERON:0004121,4.71e-23,95;UBERON:0000924,4.71e-23,95;UBERON:0006601,4.71e-23,95;UBERON:0002346,4.71e-20,64;UBERON:0003075,4.71e-20,64;UBERON:0007284,4.71e-20,64;UBERON:0002020,1.06e-19,34;UBERON:0000955,6.02e-19,47;UBERON:0006238,6.02e-19,47;UBERON:0003076,4.63e-18,12;UBERON:0003057,4.63e-18,12;UBERON:0010371,4.78e-18,73;UBERON:0002616,9.64e-18,46;UBERON:0002021,1.41e-15,10;UBERON:0000411,1.41e-15,10;UBERON:0001950,1.41e-15,10;UBERON:0002102,8.55e-13,7;UBERON:0004710,8.55e-13,7;UBERON:0005419,8.55e-13,7;UBERON:0005417,8.55e-13,7;UBERON:0005729,8.55e-13,7;UBERON:0010314,8.59e-13,92;UBERON:0003528,1.49e-12,29;UBERON:0002791,1.49e-12,29;UBERON:0001893,1.49e-12,29;UBERON:0003080,1.88e-12,40;UBERON:0002240,2.71e-12,6;UBERON:0005174,2.71e-12,6;UBERON:0001137,2.71e-12,6;UBERON:0002780,3.50e-11,39;UBERON:0001890,3.50e-11,39;UBERON:0006240,3.50e-11,39;UBERON:0010708,4.62e-11,8;UBERON:0002619,1.42e-10,17;UBERON:0001948,1.42e-10,5;UBERON:0002315,1.42e-10,5;UBERON:0000956,6.59e-10,21;UBERON:0001869,6.59e-10,21;UBERON:0000203,6.59e-10,21;UBERON:0003056,2.37e-09,49;UBERON:0002950,1.86e-08,4;UBERON:0001891,1.86e-08,4;UBERON:0009616,1.86e-08,4;UBERON:0010286,1.86e-08,4;UBERON:0000025,3.79e-08,114;UBERON:0004111,6.96e-08,122;UBERON:0004733,1.34e-07,6;UBERON:0004732,1.34e-07,6;UBERON:0002028,1.34e-07,6;UBERON:0007277,1.34e-07,6;UBERON:0000026,5.04e-07,12;UBERON:0004708,5.04e-07,12;UBERON:0002101,5.04e-07,12;UBERON:0004357,5.04e-07,12;UBERON:0004347,5.04e-07,12;UBERON:0005732,5.04e-07,12;UBERON:0005733,5.04e-07,12;UBERON:0004684,6.21e-07,3;UBERON:0002275,6.21e-07,3;UBERON:0011216,9.02e-07,194 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.30815093828268,0.439372365468944,0.388859798148567,0.979904951377538,5.75010257459886,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0.988866362566974,0,4.79360176829448,6.53171119046643,0,0,0,6.28432165688368,7.95126747425809,0.122490799214954,0,0,4.40463523997555,3.57524546638526,3.84016333140609,0.527545150920775,0.457438218012048,0,1.67509799400829,2.8138130501584,4.5839474333043,5.00868595305235,2.70506193518296,1.4911955666024,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,1.83096445709685,0,0,0,0,0,0,0,0.258937883647172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.04946557908083,1.46612694769419,0,0,0,0,5.24267237916879,2.74500361691176,0.251308704225729,3.12883776346098,2.81287003063364,3.1168206683934,3.24482526135515,0,0,0,0,0,0.229902104433473,0.180062129805349,0.150704817835715,0.0680364991513279,0,0,0,1.07783996466421,2.08016688184601,10.0292140773451,3.72632745126877,4.44875598760957,2.089512999133,1.4404749548556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.04695876553905,0.92614151141356,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.97706828962155,2.81308047821288,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,3.52308073819968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.3885110557024,4.60325236507177,4.58316410751517,6.35856774671644,2.74033007908257,3.0215755895588,0.675022500231806,4.05289082901798,2.71885445390523,4.65984280576638,0.207574695168353,0.399024873401031,0.341467211508268,0.486213434136588,0,0.367687016900028,0,0.412070114477788,0,0,0,0.188626341386076,0.37456602987953,0.192075457214608,0.17230640686684,0.476293691283074,0.347652977834566,0.578727661391115,0.412085900803307,0.294397840268795,0,0,0,0.436039249896986,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0.135804113845862,0.561142271657738,0,0.394017929502254,0,0,0.578719832943424,0.999242311751784,0.701794825336225,0.214871054048298,0.382576664137687,0.441182838239031,0.231867835620421 | |||
|short_description=p1@Dbx2 | |||
}} |
Revision as of 11:40, 13 September 2013
Short description: | p1@Dbx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Dbx2_5end |
Coexpression cluster: | NA |
Association with transcript: | -38bp_to_NM_207533, uc007xjs.1_5end |
EntrezGene: | Dbx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.36e-10 | 23 |
neuroblast (sensu Vertebrata) | 3.36e-10 | 23 |
ectodermal cell | 2.10e-09 | 44 |
neurectodermal cell | 2.10e-09 | 44 |
neural cell | 1.55e-08 | 43 |
raphe nuclei neuron | 6.21e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.