FFCP PHASE1:Hg19::chr4:75858290..75858299,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=25849|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=24536|TSSclassifier=S|UniProt=Q6UWI2|association_with_transcript=0bp_to_uc003hih.1_5end|coexpression_cluster_id=C4424|description=CAGE_peak_3_at_PARM1_5end|id=chr4:75858290..75858299,+|ontology_enrichment_celltype=CL:0000945!2.04e-09!24;CL:0000826!2.04e-09!24;CL:0000236!4.50e-07!14|ontology_enrichment_celltype_v019=CL:0000945;2.56e-11;24!CL:0000236;8.06e-08;13|ontology_enrichment_celltype_v019_2=CL:0000945,3.14e-11,24;CL:0000826,3.14e-11,24;CL:0000236,2.08e-08,14|ontology_enrichment_development_v019=UBERON:0006601;3.70e-10;82!UBERON:0002532;6.89e-07;206!UBERON:0010316;6.89e-07;206|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007023!2.63e-51!115;UBERON:0002346!1.39e-19!90;UBERON:0001049!1.55e-19!57;UBERON:0005068!1.55e-19!57;UBERON:0006241!1.55e-19!57;UBERON:0007135!1.55e-19!57;UBERON:0003080!1.56e-19!42;UBERON:0002780!6.62e-19!41;UBERON:0001890!6.62e-19!41;UBERON:0006240!6.62e-19!41;UBERON:0003075!2.73e-18!86;UBERON:0007284!2.73e-18!86;UBERON:0003056!1.90e-16!61;UBERON:0002616!1.79e-15!59;UBERON:0005743!4.67e-15!86;UBERON:0002020!5.27e-15!34;UBERON:0003528!5.27e-15!34;UBERON:0001893!7.82e-15!34;UBERON:0001869!1.92e-14!32;UBERON:0002791!3.51e-14!33;UBERON:0000073!7.12e-14!94;UBERON:0001016!7.12e-14!94;UBERON:0001017!1.29e-13!82;UBERON:0002619!2.42e-13!22;UBERON:0000955!2.46e-13!69;UBERON:0006238!2.46e-13!69;UBERON:0001950!1.49e-12!20;UBERON:0000153!8.22e-11!129;UBERON:0007811!8.22e-11!129;UBERON:0000956!1.19e-10!25;UBERON:0000203!1.19e-10!25;UBERON:0000033!4.19e-10!123;UBERON:0000924!2.76e-09!173;UBERON:0006601!2.76e-09!173;UBERON:0000481!1.03e-08!347;UBERON:0004121!1.96e-08!169|ontology_enrichment_uberon_v019=UBERON:0007023;3.14e-17;114!UBERON:0002619;6.18e-17;22!UBERON:0001869;1.89e-16;32!UBERON:0003528;6.29e-16;34!UBERON:0002020;6.29e-16;34!UBERON:0001950;8.46e-16;20!UBERON:0002791;4.24e-15;32!UBERON:0001893;6.01e-15;34!UBERON:0002780;9.88e-15;41!UBERON:0001890;9.88e-15;41!UBERON:0000956;4.23e-14;25!UBERON:0000203;4.23e-14;25!UBERON:0000073;2.48e-10;53!UBERON:0002616;2.48e-10;53!UBERON:0000955;5.23e-08;68!UBERON:0000200;4.44e-07;6!UBERON:0001017;4.87e-07;75|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.41e-64,114;UBERON:0002780,4.60e-21,41;UBERON:0001890,4.60e-21,41;UBERON:0003080,4.60e-21,41;UBERON:0006240,4.60e-21,41;UBERON:0001049,1.65e-19,56;UBERON:0005068,1.65e-19,56;UBERON:0006241,1.65e-19,56;UBERON:0007135,1.65e-19,56;UBERON:0000073,3.85e-19,53;UBERON:0002616,3.85e-19,53;UBERON:0001869,2.38e-18,32;UBERON:0003528,4.92e-18,34;UBERON:0002020,4.92e-18,34;UBERON:0002346,5.43e-18,86;UBERON:0002619,6.44e-17,22;UBERON:0001893,9.93e-17,34;UBERON:0002791,1.22e-16,32;UBERON:0003075,3.13e-16,82;UBERON:0007284,3.13e-16,82;UBERON:0001950,8.03e-16,20;UBERON:0003056,1.66e-15,61;UBERON:0001017,1.04e-14,81;UBERON:0000955,1.31e-14,68;UBERON:0006238,1.31e-14,68;UBERON:0000956,4.38e-14,25;UBERON:0000203,4.38e-14,25;UBERON:0001016,1.05e-13,89;UBERON:0011216,1.25e-11,223;UBERON:0010371,1.70e-11,104;UBERON:0010314,7.17e-11,132;UBERON:0004121,1.13e-08,171;UBERON:0000924,1.13e-08,171;UBERON:0006601,1.13e-08,171;UBERON:0000200,4.70e-07,6|phase1_expression=3.27021082687002,2.14100523890983,2.53717927372748,4.00293193412522,3.12872766099101,2.61701557230111,0,0,0.261185628199839,0.245733936501509,0,0,0,0,0,0,0,0,0.487932798790507,0.123121058076788,0,0,0,0,0,8.09982100928283,7.47115363994506,6.21815172378066,0,0,0.154816123316076,0,0,0,0,0,0.293600439334847,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0,0,0,0,0.212604299965044,0,0,0,0,0,0,0,5.27988733383968,4.36910889009705,8.00558328477199,5.12076267079809,4.00395987036012,4.02326707968138,3.30522436392431,3.81621501814146,5.69212969109448,1.17447437874188,3.05818582500183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03988298880475,0.665188192387692,0.614843499851882,4.1913304159268,0,0,2.92092654289215,5.04976238167875,3.72282289452822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0,0.150238058906597,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.365921118388786,0.662648841607426,1.04574548582567,1.0366105501537,0.756962552626885,0.36497735907583,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0.343135620597051,0,0,0.201057944823262,0,0.325808305310325,0,0,1.04337364477569,0.469634776943287,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0.985326475791887,1.05658120815871,3.10992173311158,2.16179930125442,1.38866676769018,0,0,0,0,0,0,0,0,0,0,0.775630294546667,0,0,0,0,0,0,0,0.57191197463259,11.3950537132203,0.823240336780769,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0.723906533337896,0.20547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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=25849 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24536 | |||
|TSSclassifier=S | |||
|UniProt=Q6UWI2 | |||
|association_with_transcript=0bp_to_uc003hih.1_5end | |||
|coexpression_cluster_id=C4424 | |||
|description=CAGE_peak_3_at_PARM1_5end | |||
|id=chr4:75858290..75858299,+ | |||
|ontology_enrichment_celltype=CL:0000945!2.04e-09!24;CL:0000826!2.04e-09!24;CL:0000236!4.50e-07!14 | |||
|ontology_enrichment_celltype_v019=CL:0000945;2.56e-11;24!CL:0000236;8.06e-08;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,3.14e-11,24;CL:0000826,3.14e-11,24;CL:0000236,2.08e-08,14 | |||
|ontology_enrichment_development_v019=UBERON:0006601;3.70e-10;82!UBERON:0002532;6.89e-07;206!UBERON:0010316;6.89e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.63e-51!115;UBERON:0002346!1.39e-19!90;UBERON:0001049!1.55e-19!57;UBERON:0005068!1.55e-19!57;UBERON:0006241!1.55e-19!57;UBERON:0007135!1.55e-19!57;UBERON:0003080!1.56e-19!42;UBERON:0002780!6.62e-19!41;UBERON:0001890!6.62e-19!41;UBERON:0006240!6.62e-19!41;UBERON:0003075!2.73e-18!86;UBERON:0007284!2.73e-18!86;UBERON:0003056!1.90e-16!61;UBERON:0002616!1.79e-15!59;UBERON:0005743!4.67e-15!86;UBERON:0002020!5.27e-15!34;UBERON:0003528!5.27e-15!34;UBERON:0001893!7.82e-15!34;UBERON:0001869!1.92e-14!32;UBERON:0002791!3.51e-14!33;UBERON:0000073!7.12e-14!94;UBERON:0001016!7.12e-14!94;UBERON:0001017!1.29e-13!82;UBERON:0002619!2.42e-13!22;UBERON:0000955!2.46e-13!69;UBERON:0006238!2.46e-13!69;UBERON:0001950!1.49e-12!20;UBERON:0000153!8.22e-11!129;UBERON:0007811!8.22e-11!129;UBERON:0000956!1.19e-10!25;UBERON:0000203!1.19e-10!25;UBERON:0000033!4.19e-10!123;UBERON:0000924!2.76e-09!173;UBERON:0006601!2.76e-09!173;UBERON:0000481!1.03e-08!347;UBERON:0004121!1.96e-08!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.14e-17;114!UBERON:0002619;6.18e-17;22!UBERON:0001869;1.89e-16;32!UBERON:0003528;6.29e-16;34!UBERON:0002020;6.29e-16;34!UBERON:0001950;8.46e-16;20!UBERON:0002791;4.24e-15;32!UBERON:0001893;6.01e-15;34!UBERON:0002780;9.88e-15;41!UBERON:0001890;9.88e-15;41!UBERON:0000956;4.23e-14;25!UBERON:0000203;4.23e-14;25!UBERON:0000073;2.48e-10;53!UBERON:0002616;2.48e-10;53!UBERON:0000955;5.23e-08;68!UBERON:0000200;4.44e-07;6!UBERON:0001017;4.87e-07;75 | |||
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| |||
|short_description=p3@PARM1 | |||
}} |
Revision as of 11:43, 13 September 2013
Short description: | p3@PARM1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_PARM1_5end |
Coexpression cluster: | C4424_somatostatinoma_pineal_neuroectodermal_retina_thyroid_Mesenchymal_left |
Association with transcript: | 0bp_to_uc003hih.1_5end |
EntrezGene: | PARM1 |
HGNC: | 24536 |
UniProt: | Q6UWI2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 3.14e-11 | 24 |
pro-B cell | 3.14e-11 | 24 |
B cell | 2.08e-08 | 14 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.