FFCP PHASE1:Hg19::chr5:130540111..130540138,+: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=90624|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=28072|TSSclassifier=N|UniProt=|association_with_transcript=-13bp_to_BC022429_5end|coexpression_cluster_id=C32|description=CAGE_peak_7_at_LYRM7_5end|id=chr5:130540111..130540138,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=UBERON:0000358;4.44e-18;1!UBERON:0006241;9.37e-07;3!UBERON:0003057;9.37e-07;3|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.20e-28!57;UBERON:0005068!1.20e-28!57;UBERON:0006241!1.20e-28!57;UBERON:0007135!1.20e-28!57;UBERON:0002616!3.81e-25!59;UBERON:0002780!8.36e-24!41;UBERON:0001890!8.36e-24!41;UBERON:0006240!8.36e-24!41;UBERON:0003080!5.08e-23!42;UBERON:0000955!7.67e-22!69;UBERON:0006238!7.67e-22!69;UBERON:0003075!8.87e-22!86;UBERON:0007284!8.87e-22!86;UBERON:0001017!1.04e-21!82;UBERON:0002346!2.06e-21!90;UBERON:0005743!3.11e-21!86;UBERON:0002020!1.47e-19!34;UBERON:0003528!1.47e-19!34;UBERON:0000073!3.92e-19!94;UBERON:0001016!3.92e-19!94;UBERON:0001893!2.43e-17!34;UBERON:0001869!3.59e-17!32;UBERON:0002791!1.31e-16!33;UBERON:0003056!3.52e-15!61;UBERON:0007023!9.00e-15!115;UBERON:0000033!3.97e-13!123;UBERON:0000153!1.44e-12!129;UBERON:0007811!1.44e-12!129;UBERON:0000924!1.16e-11!173;UBERON:0006601!1.16e-11!173;UBERON:0000956!1.30e-11!25;UBERON:0000203!1.30e-11!25;UBERON:0004121!1.31e-11!169;UBERON:0002619!1.30e-10!22;UBERON:0002308!2.76e-10!9;UBERON:0000125!2.76e-10!9;UBERON:0001950!4.60e-10!20;UBERON:0001894!1.69e-08!7;UBERON:0006222!1.69e-08!7;UBERON:0002420!4.79e-08!9;UBERON:0007245!4.79e-08!9;UBERON:0010009!4.79e-08!9;UBERON:0010011!4.79e-08!9;UBERON:0000454!4.79e-08!9;UBERON:0009663!8.64e-08!7;UBERON:0003076!6.85e-07!15;UBERON:0003057!6.85e-07!15;UBERON:0000369!7.49e-07!4;UBERON:0002435!7.49e-07!4;UBERON:0000204!7.49e-07!4;UBERON:0010082!7.49e-07!4|ontology_enrichment_uberon_v019=UBERON:0002784;1.62e-37;4!UBERON:0001905;6.52e-34;2!UBERON:0002757;6.52e-34;2!UBERON:0010134;6.52e-34;2!UBERON:0005408;6.52e-34;2!UBERON:0001899;6.52e-34;2!UBERON:0002619;8.40e-26;22!UBERON:0000956;8.06e-23;25!UBERON:0000203;8.06e-23;25!UBERON:0002780;1.92e-22;41!UBERON:0001890;1.92e-22;41!UBERON:0001894;8.73e-22;7!UBERON:0001950;7.95e-20;20!UBERON:0003112;1.12e-17;1!UBERON:0011158;1.12e-17;1!UBERON:0003128;1.12e-17;1!UBERON:0001703;1.12e-17;1!UBERON:0002241;1.12e-17;1!UBERON:0003296;1.64e-17;4!UBERON:0010133;1.64e-17;4!UBERON:0001869;3.40e-15;32!UBERON:0003528;1.27e-14;34!UBERON:0002020;1.27e-14;34!UBERON:0000073;1.62e-14;53!UBERON:0002616;1.62e-14;53!UBERON:0002791;2.93e-14;32!UBERON:0001893;3.00e-14;34!UBERON:0001872;3.25e-14;5!UBERON:0000200;5.23e-12;6!UBERON:0002771;1.03e-09;2!UBERON:0001954;1.03e-09;2!UBERON:0003022;1.03e-09;2!UBERON:0002421;1.03e-09;2!UBERON:0002600;1.03e-09;2!UBERON:0001897;1.64e-09;2!UBERON:0002702;1.64e-09;2!UBERON:0010225;1.64e-09;2!UBERON:0001017;1.09e-08;75!UBERON:0000955;1.14e-07;68!UBERON:0001870;9.37e-07;3!UBERON:0002240;9.37e-07;3!UBERON:0005174;9.37e-07;3!UBERON:0001137;9.37e-07;3|ontology_enrichment_uberon_v019_2=UBERON:0002784,2.36e-37,4;UBERON:0001905,7.10e-34,2;UBERON:0002757,7.10e-34,2;UBERON:0010134,7.10e-34,2;UBERON:0005408,7.10e-34,2;UBERON:0001899,7.10e-34,2;UBERON:0002780,3.61e-31,41;UBERON:0001890,3.61e-31,41;UBERON:0003080,3.61e-31,41;UBERON:0006240,3.61e-31,41;UBERON:0001049,3.76e-28,56;UBERON:0005068,3.76e-28,56;UBERON:0006241,3.76e-28,56;UBERON:0007135,3.76e-28,56;UBERON:0002619,7.71e-26,22;UBERON:0000073,3.99e-24,53;UBERON:0002616,3.99e-24,53;UBERON:0000956,7.47e-23,25;UBERON:0000203,7.47e-23,25;UBERON:0001894,1.08e-21,7;UBERON:0006222,1.08e-21,7;UBERON:0003056,6.14e-21,61;UBERON:0001950,7.07e-20,20;UBERON:0001017,4.01e-19,81;UBERON:0003075,4.01e-19,82;UBERON:0007284,4.01e-19,82;UBERON:0000955,1.78e-18,68;UBERON:0006238,1.78e-18,68;UBERON:0002346,3.28e-18,86;UBERON:0002791,5.47e-18,32;UBERON:0001869,5.47e-18,32;UBERON:0003112,7.37e-18,1;UBERON:0011158,7.37e-18,1;UBERON:0003128,7.37e-18,1;UBERON:0001703,7.37e-18,1;UBERON:0002241,7.37e-18,1;UBERON:0004761,7.37e-18,1;UBERON:0009617,7.37e-18,1;UBERON:0003296,1.71e-17,4;UBERON:0010133,1.71e-17,4;UBERON:0001016,3.51e-17,89;UBERON:0003528,5.92e-17,34;UBERON:0002020,5.92e-17,34;UBERON:0001893,5.92e-17,34;UBERON:0010371,5.84e-15,104;UBERON:0001872,2.76e-14,5;UBERON:0010314,3.43e-14,132;UBERON:0007023,9.78e-14,114;UBERON:0000200,5.08e-12,6;UBERON:0002771,9.46e-10,2;UBERON:0001954,1.12e-09,2;UBERON:0003022,1.12e-09,2;UBERON:0002421,1.12e-09,2;UBERON:0002600,1.12e-09,2;UBERON:0005253,1.33e-09,2;UBERON:0002702,1.71e-09,2;UBERON:0001897,2.02e-09,2;UBERON:0010225,2.02e-09,2;UBERON:0004121,1.09e-08,171;UBERON:0000924,1.09e-08,171;UBERON:0006601,1.09e-08,171;UBERON:0011216,6.39e-08,223;UBERON:0000025,9.64e-08,192;UBERON:0001870,9.64e-07,3|phase1_expression=0,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=90624 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=28072 | |||
|TSSclassifier=N | |||
|UniProt= | |||
|association_with_transcript=-13bp_to_BC022429_5end | |||
|coexpression_cluster_id=C32 | |||
|description=CAGE_peak_7_at_LYRM7_5end | |||
|id=chr5:130540111..130540138,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0000358;4.44e-18;1!UBERON:0006241;9.37e-07;3!UBERON:0003057;9.37e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|short_description=p7@LYRM7 | |||
}} |
Revision as of 13:01, 13 September 2013
Short description: | p7@LYRM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_LYRM7_5end |
Coexpression cluster: | C32_middle_occipital_parietal_hippocampus_amygdala_medial_olfactory |
Association with transcript: | -13bp_to_BC022429_5end |
EntrezGene: | LYRM7 |
HGNC: | 28072 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.