FFCP PHASE1:Mm9::chr17:70318557..70318574,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=224997|HGNC=|MCL_coexpression_id=1|UniProt=Q9D415|association_with_transcript=-11bp_to_ENSMUST00000060072_5end|description=CAGE_peak_7_at_Dlgap1_5end|id=chr17:70318557..70318574,+|ontology_enrichment_celltype=CL:0000540!5.76e-17!33;CL:0000047!5.76e-17!33;CL:0000031!5.76e-17!33;CL:0000404!5.76e-17!33;CL:0000117!6.46e-17!23;CL:0000337!6.46e-17!23;CL:0000393!1.36e-12!39;CL:0000211!1.36e-12!39;CL:0000221!2.42e-11!44;CL:0000133!2.42e-11!44;CL:0002319!3.43e-11!43;CL:0000055!3.69e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,5.53e-25,23;CL:0000337,5.53e-25,23;CL:0000540,1.56e-17,33;CL:0000047,1.56e-17,33;CL:0000031,1.56e-17,33;CL:0000404,1.56e-17,33;CL:0000393,5.38e-14,39;CL:0000211,5.38e-14,39;CL:0002319,3.39e-12,43;CL:0000221,8.45e-12,44;CL:0000133,8.45e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.59e-27!73;UBERON:0005743!2.59e-27!73;UBERON:0000073!5.65e-26!75;UBERON:0001016!5.65e-26!75;UBERON:0002346!1.15e-25!71;UBERON:0003075!1.15e-25!71;UBERON:0007284!1.15e-25!71;UBERON:0004121!3.18e-24!102;UBERON:0000924!3.18e-24!102;UBERON:0006601!3.18e-24!102;UBERON:0002020!6.76e-24!34;UBERON:0000033!4.37e-23!63;UBERON:0001049!2.13e-22!52;UBERON:0005068!2.13e-22!52;UBERON:0006241!2.13e-22!52;UBERON:0007135!2.13e-22!52;UBERON:0000955!4.93e-21!50;UBERON:0006238!4.93e-21!50;UBERON:0002616!4.33e-20!49;UBERON:0002791!1.10e-19!29;UBERON:0003528!1.10e-19!29;UBERON:0001893!1.10e-19!29;UBERON:0003056!9.69e-18!49;UBERON:0003080!5.67e-16!40;UBERON:0002780!3.10e-15!39;UBERON:0001890!3.10e-15!39;UBERON:0006240!3.10e-15!39;UBERON:0000956!1.32e-13!21;UBERON:0001869!1.32e-13!21;UBERON:0000203!1.32e-13!21;UBERON:0007811!5.68e-12!86;UBERON:0002619!1.97e-11!17;UBERON:0002021!2.01e-10!10;UBERON:0000411!2.01e-10!10;UBERON:0001950!2.01e-10!10;UBERON:0000153!5.15e-10!94;UBERON:0002420!2.63e-07!8;UBERON:0007245!2.63e-07!8;UBERON:0010009!2.63e-07!8;UBERON:0010011!2.63e-07!8;UBERON:0000454!2.63e-07!8;UBERON:0003076!3.77e-07!12;UBERON:0003057!3.77e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.24e-46,54;UBERON:0001049,7.49e-43,52;UBERON:0005068,7.49e-43,52;UBERON:0006241,7.49e-43,52;UBERON:0007135,7.49e-43,52;UBERON:0002020,5.33e-42,34;UBERON:0001017,1.42e-41,73;UBERON:0001016,3.55e-40,75;UBERON:0002346,8.12e-39,64;UBERON:0003075,8.12e-39,64;UBERON:0007284,8.12e-39,64;UBERON:0000955,2.39e-35,47;UBERON:0006238,2.39e-35,47;UBERON:0004121,3.54e-34,95;UBERON:0000924,3.54e-34,95;UBERON:0006601,3.54e-34,95;UBERON:0003528,8.15e-34,29;UBERON:0002791,8.15e-34,29;UBERON:0001893,8.15e-34,29;UBERON:0002616,1.53e-33,46;UBERON:0010371,9.33e-33,73;UBERON:0003080,3.20e-29,40;UBERON:0003056,7.44e-28,49;UBERON:0002780,8.88e-28,39;UBERON:0001890,8.88e-28,39;UBERON:0006240,8.88e-28,39;UBERON:0010314,7.39e-24,92;UBERON:0002619,4.57e-22,17;UBERON:0000956,4.61e-22,21;UBERON:0001869,4.61e-22,21;UBERON:0000203,4.61e-22,21;UBERON:0002021,6.61e-19,10;UBERON:0000411,6.61e-19,10;UBERON:0001950,6.61e-19,10;UBERON:0000025,3.39e-14,114;UBERON:0003076,1.42e-13,12;UBERON:0003057,1.42e-13,12;UBERON:0002420,8.17e-13,8;UBERON:0007245,8.17e-13,8;UBERON:0010009,8.17e-13,8;UBERON:0010011,8.17e-13,8;UBERON:0000454,8.17e-13,8;UBERON:0004111,1.24e-12,122;UBERON:0002240,1.75e-10,6;UBERON:0005174,1.75e-10,6;UBERON:0001137,1.75e-10,6;UBERON:0001948,3.66e-09,5;UBERON:0002315,3.66e-09,5;UBERON:0011216,7.66e-09,194;UBERON:0000369,3.44e-08,5;UBERON:0002435,3.44e-08,5;UBERON:0000204,3.44e-08,5;UBERON:0010082,3.44e-08,5;UBERON:0000483,7.86e-08,174;UBERON:0002950,1.13e-07,4;UBERON:0001891,1.13e-07,4;UBERON:0009616,1.13e-07,4;UBERON:0010286,1.13e-07,4;UBERON:0000119,1.25e-07,176|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.405017814995072,1.05162480675691,5.42736870367227,3.97563373712904,1.34739879136449,1.15014565221884,1.83843757322004,3.30347642998166,6.2566795661742,7.21950706304344,1.97829431595291,1.82975287204819,3.12548022334056,6.70039197603314,3.37657566019008,6.1119299110724,3.83017161115768,6.69146899755784,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.593768556259299,0,0.608930956624282,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,7.90508151931177,6.28340120440365,0,0,0,0,4.94309110035915,5.49000723382352,2.26177833803156,6.60532416730651,7.16003280524926,5.194701113989,3.56930778749067,0,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.452114453507145,1.49680298132921,0.640568601424249,1.03071897015702,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,7.99101804543684,2.05809224758569,0,0,0,0,0,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,3.8679856575427,0,0,0.94652465824877,0.780877488593277,0.646270193198397,0.716906393857656,0,0,0.404810701674894,0,1.18586333383957,17.3513510867776,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.168956125490778,0.234714477291508,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,5.52390283808612,7.44764167471216,8.76451229952807,7.53590771747707,9.06472676867641,8.77529250301348,5.40385443869065,9.5159905886683,11.39072685854,0,0,0.341467211508268,0.243106717068294,0,0.735374033800057,1.11123363900808,0.412070114477788,0,0.758091635291392,0.50695859978048,0.754505365544305,0.280924522409647,0.576226371643824,0.459483751644906,0.476293691283074,0.231768651889711,0.578727661391115,0.824171801606613,0.441596760403192,1.02860775715625,0.177475806159338,0.715308569841963,1.0174249164263,0.941093804153306,0.338458431566706,0.182927972872773,1.05227884575137,0.679020569229309,0.561142271657738,0.474540072496697,0.886540341380071,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.935726433781634,0.214871054048298,0.382576664137687,0,0.231867835620421|short_description=p7@Dlgap1}} | ||
|EntrezGene=224997 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9D415 | |||
|association_with_transcript=-11bp_to_ENSMUST00000060072_5end | |||
|description=CAGE_peak_7_at_Dlgap1_5end | |||
|id=chr17:70318557..70318574,+ | |||
|ontology_enrichment_celltype=CL:0000540!5.76e-17!33;CL:0000047!5.76e-17!33;CL:0000031!5.76e-17!33;CL:0000404!5.76e-17!33;CL:0000117!6.46e-17!23;CL:0000337!6.46e-17!23;CL:0000393!1.36e-12!39;CL:0000211!1.36e-12!39;CL:0000221!2.42e-11!44;CL:0000133!2.42e-11!44;CL:0002319!3.43e-11!43;CL:0000055!3.69e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.53e-25,23;CL:0000337,5.53e-25,23;CL:0000540,1.56e-17,33;CL:0000047,1.56e-17,33;CL:0000031,1.56e-17,33;CL:0000404,1.56e-17,33;CL:0000393,5.38e-14,39;CL:0000211,5.38e-14,39;CL:0002319,3.39e-12,43;CL:0000221,8.45e-12,44;CL:0000133,8.45e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.59e-27!73;UBERON:0005743!2.59e-27!73;UBERON:0000073!5.65e-26!75;UBERON:0001016!5.65e-26!75;UBERON:0002346!1.15e-25!71;UBERON:0003075!1.15e-25!71;UBERON:0007284!1.15e-25!71;UBERON:0004121!3.18e-24!102;UBERON:0000924!3.18e-24!102;UBERON:0006601!3.18e-24!102;UBERON:0002020!6.76e-24!34;UBERON:0000033!4.37e-23!63;UBERON:0001049!2.13e-22!52;UBERON:0005068!2.13e-22!52;UBERON:0006241!2.13e-22!52;UBERON:0007135!2.13e-22!52;UBERON:0000955!4.93e-21!50;UBERON:0006238!4.93e-21!50;UBERON:0002616!4.33e-20!49;UBERON:0002791!1.10e-19!29;UBERON:0003528!1.10e-19!29;UBERON:0001893!1.10e-19!29;UBERON:0003056!9.69e-18!49;UBERON:0003080!5.67e-16!40;UBERON:0002780!3.10e-15!39;UBERON:0001890!3.10e-15!39;UBERON:0006240!3.10e-15!39;UBERON:0000956!1.32e-13!21;UBERON:0001869!1.32e-13!21;UBERON:0000203!1.32e-13!21;UBERON:0007811!5.68e-12!86;UBERON:0002619!1.97e-11!17;UBERON:0002021!2.01e-10!10;UBERON:0000411!2.01e-10!10;UBERON:0001950!2.01e-10!10;UBERON:0000153!5.15e-10!94;UBERON:0002420!2.63e-07!8;UBERON:0007245!2.63e-07!8;UBERON:0010009!2.63e-07!8;UBERON:0010011!2.63e-07!8;UBERON:0000454!2.63e-07!8;UBERON:0003076!3.77e-07!12;UBERON:0003057!3.77e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.24e-46,54;UBERON:0001049,7.49e-43,52;UBERON:0005068,7.49e-43,52;UBERON:0006241,7.49e-43,52;UBERON:0007135,7.49e-43,52;UBERON:0002020,5.33e-42,34;UBERON:0001017,1.42e-41,73;UBERON:0001016,3.55e-40,75;UBERON:0002346,8.12e-39,64;UBERON:0003075,8.12e-39,64;UBERON:0007284,8.12e-39,64;UBERON:0000955,2.39e-35,47;UBERON:0006238,2.39e-35,47;UBERON:0004121,3.54e-34,95;UBERON:0000924,3.54e-34,95;UBERON:0006601,3.54e-34,95;UBERON:0003528,8.15e-34,29;UBERON:0002791,8.15e-34,29;UBERON:0001893,8.15e-34,29;UBERON:0002616,1.53e-33,46;UBERON:0010371,9.33e-33,73;UBERON:0003080,3.20e-29,40;UBERON:0003056,7.44e-28,49;UBERON:0002780,8.88e-28,39;UBERON:0001890,8.88e-28,39;UBERON:0006240,8.88e-28,39;UBERON:0010314,7.39e-24,92;UBERON:0002619,4.57e-22,17;UBERON:0000956,4.61e-22,21;UBERON:0001869,4.61e-22,21;UBERON:0000203,4.61e-22,21;UBERON:0002021,6.61e-19,10;UBERON:0000411,6.61e-19,10;UBERON:0001950,6.61e-19,10;UBERON:0000025,3.39e-14,114;UBERON:0003076,1.42e-13,12;UBERON:0003057,1.42e-13,12;UBERON:0002420,8.17e-13,8;UBERON:0007245,8.17e-13,8;UBERON:0010009,8.17e-13,8;UBERON:0010011,8.17e-13,8;UBERON:0000454,8.17e-13,8;UBERON:0004111,1.24e-12,122;UBERON:0002240,1.75e-10,6;UBERON:0005174,1.75e-10,6;UBERON:0001137,1.75e-10,6;UBERON:0001948,3.66e-09,5;UBERON:0002315,3.66e-09,5;UBERON:0011216,7.66e-09,194;UBERON:0000369,3.44e-08,5;UBERON:0002435,3.44e-08,5;UBERON:0000204,3.44e-08,5;UBERON:0010082,3.44e-08,5;UBERON:0000483,7.86e-08,174;UBERON:0002950,1.13e-07,4;UBERON:0001891,1.13e-07,4;UBERON:0009616,1.13e-07,4;UBERON:0010286,1.13e-07,4;UBERON:0000119,1.25e-07,176 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,1.90149421051854,0,0,0,0,0,0.299600110518405,0,0.725827286159344,0.405017814995072,1.05162480675691,5.42736870367227,3.97563373712904,1.34739879136449,1.15014565221884,1.83843757322004,3.30347642998166,6.2566795661742,7.21950706304344,1.97829431595291,1.82975287204819,3.12548022334056,6.70039197603314,3.37657566019008,6.1119299110724,3.83017161115768,6.69146899755784,5.96478226640962,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0.593768556259299,0,0.608930956624282,0,0.150722640552623,0.470354828542819,0,0,0,0,0,0,0,0,7.90508151931177,6.28340120440365,0,0,0,0,4.94309110035915,5.49000723382352,2.26177833803156,6.60532416730651,7.16003280524926,5.194701113989,3.56930778749067,0,0.124406970610093,0,0.210441855886474,0,0,0.180062129805349,0.452114453507145,1.49680298132921,0.640568601424249,1.03071897015702,1.29351685369508,0,0,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,7.99101804543684,2.05809224758569,0,0,0,0,0,0.403367049246685,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0137647496948,3.8679856575427,0,0,0.94652465824877,0.780877488593277,0.646270193198397,0.716906393857656,0,0,0.404810701674894,0,1.18586333383957,17.3513510867776,0.141940085208269,0.178065603667255,0.325773918707152,0,0,0,0,0.188605079755898,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15223013417866,0,0,0,0,0,0,0,0,0,0,0.316335993581135,0.406638934253697,0.324016022465404,0.418176592028937,0.218362563746178,0.134864346384821,0,0,0,0.621339313086926,0,0.149516546043979,0.165458490457098,0.388902376688095,0,0.168956125490778,0.234714477291508,0,0,0.483168241652012,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0827665835536,5.52390283808612,7.44764167471216,8.76451229952807,7.53590771747707,9.06472676867641,8.77529250301348,5.40385443869065,9.5159905886683,11.39072685854,0,0,0.341467211508268,0.243106717068294,0,0.735374033800057,1.11123363900808,0.412070114477788,0,0.758091635291392,0.50695859978048,0.754505365544305,0.280924522409647,0.576226371643824,0.459483751644906,0.476293691283074,0.231768651889711,0.578727661391115,0.824171801606613,0.441596760403192,1.02860775715625,0.177475806159338,0.715308569841963,1.0174249164263,0.941093804153306,0.338458431566706,0.182927972872773,1.05227884575137,0.679020569229309,0.561142271657738,0.474540072496697,0.886540341380071,0.409231043169689,0.464810523557898,0.385813221962283,0.249810577937946,0.935726433781634,0.214871054048298,0.382576664137687,0,0.231867835620421 | |||
|short_description=p7@Dlgap1 | |||
}} |
Revision as of 15:12, 13 September 2013
Short description: | p7@Dlgap1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Dlgap1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -11bp_to_ENSMUST00000060072_5end |
EntrezGene: | Dlgap1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.53e-25 | 23 |
neuroblast (sensu Vertebrata) | 5.53e-25 | 23 |
neuron | 1.56e-17 | 33 |
neuronal stem cell | 1.56e-17 | 33 |
neuroblast | 1.56e-17 | 33 |
electrically signaling cell | 1.56e-17 | 33 |
electrically responsive cell | 5.38e-14 | 39 |
electrically active cell | 5.38e-14 | 39 |
neural cell | 3.39e-12 | 43 |
ectodermal cell | 8.45e-12 | 44 |
neurectodermal cell | 8.45e-12 | 44 |
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