FFCP PHASE1:Mm9::chr1:160621435..160621446,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=525|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr1:160621435..160621446,+|id=chr1:160621435..160621446,+|ontology_enrichment_celltype=CL:0000540!1.16e-23!33;CL:0000047!1.16e-23!33;CL:0000031!1.16e-23!33;CL:0000404!1.16e-23!33;CL:0000117!8.63e-23!23;CL:0000337!8.63e-23!23;CL:0000393!1.25e-18!39;CL:0000211!1.25e-18!39;CL:0002319!1.72e-17!43;CL:0000221!6.90e-17!44;CL:0000133!6.90e-17!44;CL:0000055!8.63e-14!50;CL:0002609!1.19e-07!6;CL:0002321!1.70e-07!70;CL:0000220!1.70e-07!70|ontology_enrichment_celltype_v019_2=CL:0000117,5.69e-29,23;CL:0000337,5.69e-29,23;CL:0000540,1.49e-19,33;CL:0000047,1.49e-19,33;CL:0000031,1.49e-19,33;CL:0000404,1.49e-19,33;CL:0000393,3.25e-16,39;CL:0000211,3.25e-16,39;CL:0002319,1.67e-14,43;CL:0000221,3.99e-14,44;CL:0000133,3.99e-14,44;CL:0002612,2.61e-13,3;CL:0002321,4.61e-08,70;CL:0002614,9.45e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.12e-37!73;UBERON:0005743!1.12e-37!73;UBERON:0000073!3.07e-36!75;UBERON:0001016!3.07e-36!75;UBERON:0002020!6.96e-33!34;UBERON:0000955!3.13e-31!50;UBERON:0006238!3.13e-31!50;UBERON:0002616!2.75e-30!49;UBERON:0001049!3.61e-30!52;UBERON:0005068!3.61e-30!52;UBERON:0006241!3.61e-30!52;UBERON:0007135!3.61e-30!52;UBERON:0002791!7.69e-29!29;UBERON:0003528!7.69e-29!29;UBERON:0001893!7.69e-29!29;UBERON:0002346!6.91e-28!71;UBERON:0003075!6.91e-28!71;UBERON:0007284!6.91e-28!71;UBERON:0004121!6.37e-27!102;UBERON:0000924!6.37e-27!102;UBERON:0006601!6.37e-27!102;UBERON:0003080!1.47e-26!40;UBERON:0000033!3.45e-26!63;UBERON:0002780!1.41e-25!39;UBERON:0001890!1.41e-25!39;UBERON:0006240!1.41e-25!39;UBERON:0003056!5.77e-24!49;UBERON:0000956!9.75e-20!21;UBERON:0001869!9.75e-20!21;UBERON:0000203!9.75e-20!21;UBERON:0007811!1.04e-15!86;UBERON:0002619!1.15e-15!17;UBERON:0002021!1.40e-13!10;UBERON:0000411!1.40e-13!10;UBERON:0001950!1.40e-13!10;UBERON:0000153!2.61e-13!94;UBERON:0002420!3.86e-10!8;UBERON:0007245!3.86e-10!8;UBERON:0010009!3.86e-10!8;UBERON:0010011!3.86e-10!8;UBERON:0000454!3.86e-10!8;UBERON:0000025!6.82e-08!114;UBERON:0002298!8.47e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.16e-38,34;UBERON:0000073,1.30e-28,54;UBERON:0003528,9.34e-27,29;UBERON:0002791,9.34e-27,29;UBERON:0001893,9.34e-27,29;UBERON:0001049,5.79e-24,52;UBERON:0005068,5.79e-24,52;UBERON:0006241,5.79e-24,52;UBERON:0007135,5.79e-24,52;UBERON:0002619,8.75e-24,17;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0002021,1.08e-20,10;UBERON:0000411,1.08e-20,10;UBERON:0001950,1.08e-20,10;UBERON:0002780,2.65e-19,39;UBERON:0001890,2.65e-19,39;UBERON:0006240,2.65e-19,39;UBERON:0000956,5.74e-19,21;UBERON:0001869,5.74e-19,21;UBERON:0000203,5.74e-19,21;UBERON:0002346,6.12e-19,64;UBERON:0003075,6.12e-19,64;UBERON:0007284,6.12e-19,64;UBERON:0003080,9.21e-19,40;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0010371,3.00e-16,73;UBERON:0002616,5.23e-16,46;UBERON:0000955,1.29e-15,47;UBERON:0006238,1.29e-15,47;UBERON:0003056,6.97e-15,49;UBERON:0001948,6.77e-14,5;UBERON:0002315,6.77e-14,5;UBERON:0002257,2.61e-13,3;UBERON:0010314,2.75e-12,92;UBERON:0002240,1.31e-11,6;UBERON:0005174,1.31e-11,6;UBERON:0001137,1.31e-11,6;UBERON:0000025,2.46e-09,114;UBERON:0002420,7.99e-09,8;UBERON:0007245,7.99e-09,8;UBERON:0010009,7.99e-09,8;UBERON:0010011,7.99e-09,8;UBERON:0000454,7.99e-09,8;UBERON:0004111,1.60e-08,122;UBERON:0002038,9.45e-07,3;UBERON:0009663,9.45e-07,3;UBERON:0009661,9.45e-07,3;UBERON:0000125,9.45e-07,3;UBERON:0002308,9.45e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,0,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.945041568321835,0.420649922702764,0,2.20868540951614,0.244981598429908,1.62937300731002,1.83843757322004,1.10115880999389,1.0214987046815,0.768032666281217,0.791317726381163,2.8361169516747,1.04182674111352,1.95428099300967,2.25105044012672,0.45839474333043,3.24091444021034,1.28134512719193,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0.915001205637253,0.125654352112864,0.521472960576829,0.511430914660661,0.20778804455956,0.811206315338788,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,1.84130094602871,1.14579102687879,2.23409137046794,0.685082519770642,0.755393897389701,0.675022500231806,2.2516060161211,1.81256963593682,2.5888015587591,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0.231867835620421|short_description=p@chr1:160621435..160621446,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=525 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr1:160621435..160621446,+ | |||
|id=chr1:160621435..160621446,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.16e-23!33;CL:0000047!1.16e-23!33;CL:0000031!1.16e-23!33;CL:0000404!1.16e-23!33;CL:0000117!8.63e-23!23;CL:0000337!8.63e-23!23;CL:0000393!1.25e-18!39;CL:0000211!1.25e-18!39;CL:0002319!1.72e-17!43;CL:0000221!6.90e-17!44;CL:0000133!6.90e-17!44;CL:0000055!8.63e-14!50;CL:0002609!1.19e-07!6;CL:0002321!1.70e-07!70;CL:0000220!1.70e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,5.69e-29,23;CL:0000337,5.69e-29,23;CL:0000540,1.49e-19,33;CL:0000047,1.49e-19,33;CL:0000031,1.49e-19,33;CL:0000404,1.49e-19,33;CL:0000393,3.25e-16,39;CL:0000211,3.25e-16,39;CL:0002319,1.67e-14,43;CL:0000221,3.99e-14,44;CL:0000133,3.99e-14,44;CL:0002612,2.61e-13,3;CL:0002321,4.61e-08,70;CL:0002614,9.45e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.12e-37!73;UBERON:0005743!1.12e-37!73;UBERON:0000073!3.07e-36!75;UBERON:0001016!3.07e-36!75;UBERON:0002020!6.96e-33!34;UBERON:0000955!3.13e-31!50;UBERON:0006238!3.13e-31!50;UBERON:0002616!2.75e-30!49;UBERON:0001049!3.61e-30!52;UBERON:0005068!3.61e-30!52;UBERON:0006241!3.61e-30!52;UBERON:0007135!3.61e-30!52;UBERON:0002791!7.69e-29!29;UBERON:0003528!7.69e-29!29;UBERON:0001893!7.69e-29!29;UBERON:0002346!6.91e-28!71;UBERON:0003075!6.91e-28!71;UBERON:0007284!6.91e-28!71;UBERON:0004121!6.37e-27!102;UBERON:0000924!6.37e-27!102;UBERON:0006601!6.37e-27!102;UBERON:0003080!1.47e-26!40;UBERON:0000033!3.45e-26!63;UBERON:0002780!1.41e-25!39;UBERON:0001890!1.41e-25!39;UBERON:0006240!1.41e-25!39;UBERON:0003056!5.77e-24!49;UBERON:0000956!9.75e-20!21;UBERON:0001869!9.75e-20!21;UBERON:0000203!9.75e-20!21;UBERON:0007811!1.04e-15!86;UBERON:0002619!1.15e-15!17;UBERON:0002021!1.40e-13!10;UBERON:0000411!1.40e-13!10;UBERON:0001950!1.40e-13!10;UBERON:0000153!2.61e-13!94;UBERON:0002420!3.86e-10!8;UBERON:0007245!3.86e-10!8;UBERON:0010009!3.86e-10!8;UBERON:0010011!3.86e-10!8;UBERON:0000454!3.86e-10!8;UBERON:0000025!6.82e-08!114;UBERON:0002298!8.47e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.16e-38,34;UBERON:0000073,1.30e-28,54;UBERON:0003528,9.34e-27,29;UBERON:0002791,9.34e-27,29;UBERON:0001893,9.34e-27,29;UBERON:0001049,5.79e-24,52;UBERON:0005068,5.79e-24,52;UBERON:0006241,5.79e-24,52;UBERON:0007135,5.79e-24,52;UBERON:0002619,8.75e-24,17;UBERON:0001017,6.62e-23,73;UBERON:0001016,3.24e-22,75;UBERON:0002021,1.08e-20,10;UBERON:0000411,1.08e-20,10;UBERON:0001950,1.08e-20,10;UBERON:0002780,2.65e-19,39;UBERON:0001890,2.65e-19,39;UBERON:0006240,2.65e-19,39;UBERON:0000956,5.74e-19,21;UBERON:0001869,5.74e-19,21;UBERON:0000203,5.74e-19,21;UBERON:0002346,6.12e-19,64;UBERON:0003075,6.12e-19,64;UBERON:0007284,6.12e-19,64;UBERON:0003080,9.21e-19,40;UBERON:0004121,6.58e-17,95;UBERON:0000924,6.58e-17,95;UBERON:0006601,6.58e-17,95;UBERON:0010371,3.00e-16,73;UBERON:0002616,5.23e-16,46;UBERON:0000955,1.29e-15,47;UBERON:0006238,1.29e-15,47;UBERON:0003056,6.97e-15,49;UBERON:0001948,6.77e-14,5;UBERON:0002315,6.77e-14,5;UBERON:0002257,2.61e-13,3;UBERON:0010314,2.75e-12,92;UBERON:0002240,1.31e-11,6;UBERON:0005174,1.31e-11,6;UBERON:0001137,1.31e-11,6;UBERON:0000025,2.46e-09,114;UBERON:0002420,7.99e-09,8;UBERON:0007245,7.99e-09,8;UBERON:0010009,7.99e-09,8;UBERON:0010011,7.99e-09,8;UBERON:0000454,7.99e-09,8;UBERON:0004111,1.60e-08,122;UBERON:0002038,9.45e-07,3;UBERON:0009663,9.45e-07,3;UBERON:0009661,9.45e-07,3;UBERON:0000125,9.45e-07,3;UBERON:0002308,9.45e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.606949382578793,3.70293685490423,0,0,0,0,0,0,0,0.384218305321555,0.622137673850866,0.945041568321835,0.420649922702764,0,2.20868540951614,0.244981598429908,1.62937300731002,1.83843757322004,1.10115880999389,1.0214987046815,0.768032666281217,0.791317726381163,2.8361169516747,1.04182674111352,1.95428099300967,2.25105044012672,0.45839474333043,3.24091444021034,1.28134512719193,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.449371918214468,0.915001205637253,0.125654352112864,0.521472960576829,0.511430914660661,0.20778804455956,0.811206315338788,0,0,0,0,0,0,0.180062129805349,0.30140963567143,0,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26173969138476,0.102904612379284,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.820481806145422,0,0,0.631016438832513,0.390438744296638,0.430846795465598,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0.178368817602071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.95326289831947,1.84130094602871,1.14579102687879,2.23409137046794,0.685082519770642,0.755393897389701,0.675022500231806,2.2516060161211,1.81256963593682,2.5888015587591,0.103787347584177,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0.0574354689556133,0,0,0,0,0,0,0,0,0.290692833264657,0.0941093804153306,0.169229215783353,0,0.263069711437843,0,0,0.118635018124174,0.0985044823755635,0.409231043169689,0,0.192906610981141,0.499621155875892,0.467863216890817,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p@chr1:160621435..160621446,+ | |||
}} |
Revision as of 19:22, 13 September 2013
Short description: | p@chr1:160621435..160621446, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:160621435..160621446, + |
Coexpression cluster: | MCL_coexpression_mm9:525 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 5.69e-29 | 23 |
neuroblast (sensu Vertebrata) | 5.69e-29 | 23 |
neuron | 1.49e-19 | 33 |
neuronal stem cell | 1.49e-19 | 33 |
neuroblast | 1.49e-19 | 33 |
electrically signaling cell | 1.49e-19 | 33 |
electrically responsive cell | 3.25e-16 | 39 |
electrically active cell | 3.25e-16 | 39 |
neural cell | 1.67e-14 | 43 |
ectodermal cell | 3.99e-14 | 44 |
neurectodermal cell | 3.99e-14 | 44 |
neuron of the ventral spinal cord | 2.61e-13 | 3 |
embryonic cell | 4.61e-08 | 70 |
neuron of the substantia nigra | 9.45e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.