FFCP PHASE1:Mm9::chr1:48519136..48519137,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=370|UniProt=|association_with_transcript=0bp_to_ENSMUST00000083009_5end|description=CAGE_peak_1_at_ENSMUST00000083009_5end|id=chr1:48519136..48519137,-|ontology_enrichment_celltype=CL:0002319!1.10e-27!43;CL:0000055!2.14e-27!50;CL:0000221!1.02e-26!44;CL:0000133!1.02e-26!44;CL:0000548!6.11e-23!115;CL:0000004!6.11e-23!115;CL:0000255!6.11e-23!115;CL:0002371!9.15e-23!118;CL:0002321!1.13e-22!70;CL:0000220!1.13e-22!70;CL:0000144!1.89e-22!121;CL:0000012!1.89e-22!121;CL:0000393!3.12e-22!39;CL:0000211!3.12e-22!39;CL:0000540!8.97e-22!33;CL:0000047!8.97e-22!33;CL:0000031!8.97e-22!33;CL:0000404!8.97e-22!33;CL:0000034!3.27e-21!97;CL:0000723!4.07e-21!91;CL:0000048!4.07e-21!91;CL:0000117!3.47e-19!23;CL:0000337!3.47e-19!23;CL:0002453!1.45e-07!8;CL:0000219!2.86e-07!54|ontology_enrichment_celltype_v019_2=CL:0002319,3.80e-22,43;CL:0000221,1.68e-21,44;CL:0000133,1.68e-21,44;CL:0000117,1.68e-20,23;CL:0000337,1.68e-20,23;CL:0002321,9.86e-20,70;CL:0000393,1.47e-16,39;CL:0000211,1.47e-16,39;CL:0000540,1.67e-16,33;CL:0000047,1.67e-16,33;CL:0000031,1.67e-16,33;CL:0000404,1.67e-16,33;CL:0000723,4.29e-15,91;CL:0000048,4.29e-15,91;CL:0000034,1.11e-13,97;CL:0002453,2.39e-08,8;CL:0000128,3.86e-08,6;CL:0000126,3.86e-08,6;CL:0000127,3.86e-08,6;CL:0002609,4.15e-08,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!1.65e-25!73;UBERON:0005743!1.65e-25!73;UBERON:0000073!3.00e-25!75;UBERON:0001016!3.00e-25!75;UBERON:0002020!4.55e-21!34;UBERON:0002791!2.35e-17!29;UBERON:0003528!2.35e-17!29;UBERON:0001893!2.35e-17!29;UBERON:0004121!7.59e-16!102;UBERON:0000924!7.59e-16!102;UBERON:0006601!7.59e-16!102;UBERON:0001049!1.01e-14!52;UBERON:0005068!1.01e-14!52;UBERON:0006241!1.01e-14!52;UBERON:0007135!1.01e-14!52;UBERON:0000956!1.12e-14!21;UBERON:0001869!1.12e-14!21;UBERON:0000203!1.12e-14!21;UBERON:0002616!5.29e-14!49;UBERON:0002619!1.62e-13!17;UBERON:0000955!1.70e-13!50;UBERON:0006238!1.70e-13!50;UBERON:0002780!1.84e-12!39;UBERON:0001890!1.84e-12!39;UBERON:0006240!1.84e-12!39;UBERON:0003080!6.44e-12!40;UBERON:0002346!5.47e-11!71;UBERON:0003075!5.47e-11!71;UBERON:0007284!5.47e-11!71;UBERON:0002021!3.17e-10!10;UBERON:0000411!3.17e-10!10;UBERON:0001950!3.17e-10!10;UBERON:0000033!9.95e-10!63;UBERON:0003056!1.94e-09!49|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.58e-25,34;UBERON:0001017,3.13e-22,73;UBERON:0001016,2.00e-21,75;UBERON:0003528,7.72e-21,29;UBERON:0002791,7.72e-21,29;UBERON:0001893,7.72e-21,29;UBERON:0000956,8.43e-19,21;UBERON:0001869,8.43e-19,21;UBERON:0000203,8.43e-19,21;UBERON:0002619,4.71e-18,17;UBERON:0000073,2.63e-17,54;UBERON:0001049,2.51e-16,52;UBERON:0005068,2.51e-16,52;UBERON:0006241,2.51e-16,52;UBERON:0007135,2.51e-16,52;UBERON:0004121,3.09e-15,95;UBERON:0000924,3.09e-15,95;UBERON:0006601,3.09e-15,95;UBERON:0002780,2.99e-14,39;UBERON:0001890,2.99e-14,39;UBERON:0006240,2.99e-14,39;UBERON:0003080,8.93e-14,40;UBERON:0002616,6.90e-13,46;UBERON:0002021,8.95e-13,10;UBERON:0000411,8.95e-13,10;UBERON:0001950,8.95e-13,10;UBERON:0000955,1.66e-12,47;UBERON:0006238,1.66e-12,47;UBERON:0002346,3.79e-12,64;UBERON:0003075,3.79e-12,64;UBERON:0007284,3.79e-12,64;UBERON:0003056,2.20e-10,49;UBERON:0010371,6.21e-10,73;UBERON:0010314,2.61e-08,92;UBERON:0000025,5.82e-08,114;UBERON:0004111,5.31e-07,122;UBERON:0001954,7.93e-07,7;UBERON:0003022,7.93e-07,7;UBERON:0002421,7.93e-07,7;UBERON:0000349,7.93e-07,7;UBERON:0002600,7.93e-07,7|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0.171217968225505,0,0,0.174840804837995,0.333109761815663,0,2.79824751251259,0.157731082679119,0.274228867211478,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0,3.17515336729816,1.84519436275371,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0.125896817975577,0,0,3.12956537739216,0.436050312760893,2.63623419281366,1.36100929351998,1.39986421625363,4.31257693094915,0,0,0,0.257259436035947,1.14613375975503,2.06268836910977,2.63011399117477,2.64495489636016,1.90149421051854,0.677689064138264,2.66788438833342,0.899899717281399,5.93319817540185,7.104801149461,1.79760066311043,0.384218305321555,0.518448061542388,3.10513658162888,1.26194976810829,1.42825492201902,1.32521124570968,2.81728838194394,1.15014565221884,4.5960939330501,11.0115880999389,0.383062014255563,0.768032666281217,3.82470234417562,1.55528994124096,2.6045668527838,0.837548997004143,1.12552522006336,0.61119299110724,1.47314292736834,1.70846016958924,0.372798891650601,0.075726193333184,0,0,0,0,6.47643829965381,5.84798775702902,3.58421509677868,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,2.02209778005913,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,3.01582567878545,0.54390568381871,0,0,0.160550589987792,0,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,1.55959071857676,1.13230612315533,0,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0.358855426437903,0.167884616364078,0,0,0,0,0,2.25900737046827,1.38097570952153,4.01026859407578,0.68741272937475,6.85082519770642,6.0431511791176,5.40018000185445,2.70192721934532,0.453142408984205,4.14208249401456,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0|short_description=p1@ENSMUST00000083009}} | ||
|EntrezGene= | |||
|HGNC= | |||
|MCL_coexpression_id=370 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000083009_5end | |||
|description=CAGE_peak_1_at_ENSMUST00000083009_5end | |||
|id=chr1:48519136..48519137,- | |||
|ontology_enrichment_celltype=CL:0002319!1.10e-27!43;CL:0000055!2.14e-27!50;CL:0000221!1.02e-26!44;CL:0000133!1.02e-26!44;CL:0000548!6.11e-23!115;CL:0000004!6.11e-23!115;CL:0000255!6.11e-23!115;CL:0002371!9.15e-23!118;CL:0002321!1.13e-22!70;CL:0000220!1.13e-22!70;CL:0000144!1.89e-22!121;CL:0000012!1.89e-22!121;CL:0000393!3.12e-22!39;CL:0000211!3.12e-22!39;CL:0000540!8.97e-22!33;CL:0000047!8.97e-22!33;CL:0000031!8.97e-22!33;CL:0000404!8.97e-22!33;CL:0000034!3.27e-21!97;CL:0000723!4.07e-21!91;CL:0000048!4.07e-21!91;CL:0000117!3.47e-19!23;CL:0000337!3.47e-19!23;CL:0002453!1.45e-07!8;CL:0000219!2.86e-07!54 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.80e-22,43;CL:0000221,1.68e-21,44;CL:0000133,1.68e-21,44;CL:0000117,1.68e-20,23;CL:0000337,1.68e-20,23;CL:0002321,9.86e-20,70;CL:0000393,1.47e-16,39;CL:0000211,1.47e-16,39;CL:0000540,1.67e-16,33;CL:0000047,1.67e-16,33;CL:0000031,1.67e-16,33;CL:0000404,1.67e-16,33;CL:0000723,4.29e-15,91;CL:0000048,4.29e-15,91;CL:0000034,1.11e-13,97;CL:0002453,2.39e-08,8;CL:0000128,3.86e-08,6;CL:0000126,3.86e-08,6;CL:0000127,3.86e-08,6;CL:0002609,4.15e-08,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.65e-25!73;UBERON:0005743!1.65e-25!73;UBERON:0000073!3.00e-25!75;UBERON:0001016!3.00e-25!75;UBERON:0002020!4.55e-21!34;UBERON:0002791!2.35e-17!29;UBERON:0003528!2.35e-17!29;UBERON:0001893!2.35e-17!29;UBERON:0004121!7.59e-16!102;UBERON:0000924!7.59e-16!102;UBERON:0006601!7.59e-16!102;UBERON:0001049!1.01e-14!52;UBERON:0005068!1.01e-14!52;UBERON:0006241!1.01e-14!52;UBERON:0007135!1.01e-14!52;UBERON:0000956!1.12e-14!21;UBERON:0001869!1.12e-14!21;UBERON:0000203!1.12e-14!21;UBERON:0002616!5.29e-14!49;UBERON:0002619!1.62e-13!17;UBERON:0000955!1.70e-13!50;UBERON:0006238!1.70e-13!50;UBERON:0002780!1.84e-12!39;UBERON:0001890!1.84e-12!39;UBERON:0006240!1.84e-12!39;UBERON:0003080!6.44e-12!40;UBERON:0002346!5.47e-11!71;UBERON:0003075!5.47e-11!71;UBERON:0007284!5.47e-11!71;UBERON:0002021!3.17e-10!10;UBERON:0000411!3.17e-10!10;UBERON:0001950!3.17e-10!10;UBERON:0000033!9.95e-10!63;UBERON:0003056!1.94e-09!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,1.58e-25,34;UBERON:0001017,3.13e-22,73;UBERON:0001016,2.00e-21,75;UBERON:0003528,7.72e-21,29;UBERON:0002791,7.72e-21,29;UBERON:0001893,7.72e-21,29;UBERON:0000956,8.43e-19,21;UBERON:0001869,8.43e-19,21;UBERON:0000203,8.43e-19,21;UBERON:0002619,4.71e-18,17;UBERON:0000073,2.63e-17,54;UBERON:0001049,2.51e-16,52;UBERON:0005068,2.51e-16,52;UBERON:0006241,2.51e-16,52;UBERON:0007135,2.51e-16,52;UBERON:0004121,3.09e-15,95;UBERON:0000924,3.09e-15,95;UBERON:0006601,3.09e-15,95;UBERON:0002780,2.99e-14,39;UBERON:0001890,2.99e-14,39;UBERON:0006240,2.99e-14,39;UBERON:0003080,8.93e-14,40;UBERON:0002616,6.90e-13,46;UBERON:0002021,8.95e-13,10;UBERON:0000411,8.95e-13,10;UBERON:0001950,8.95e-13,10;UBERON:0000955,1.66e-12,47;UBERON:0006238,1.66e-12,47;UBERON:0002346,3.79e-12,64;UBERON:0003075,3.79e-12,64;UBERON:0007284,3.79e-12,64;UBERON:0003056,2.20e-10,49;UBERON:0010371,6.21e-10,73;UBERON:0010314,2.61e-08,92;UBERON:0000025,5.82e-08,114;UBERON:0004111,5.31e-07,122;UBERON:0001954,7.93e-07,7;UBERON:0003022,7.93e-07,7;UBERON:0002421,7.93e-07,7;UBERON:0000349,7.93e-07,7;UBERON:0002600,7.93e-07,7 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0.171217968225505,0,0,0.174840804837995,0.333109761815663,0,2.79824751251259,0.157731082679119,0.274228867211478,0.42438965179803,0,0,0,0.159992422793407,0,0,0,0,0,0,0,3.17515336729816,1.84519436275371,0,0,0,0,0.418531630736908,0,0,0.588231488031014,0,0,0.125896817975577,0,0,3.12956537739216,0.436050312760893,2.63623419281366,1.36100929351998,1.39986421625363,4.31257693094915,0,0,0,0.257259436035947,1.14613375975503,2.06268836910977,2.63011399117477,2.64495489636016,1.90149421051854,0.677689064138264,2.66788438833342,0.899899717281399,5.93319817540185,7.104801149461,1.79760066311043,0.384218305321555,0.518448061542388,3.10513658162888,1.26194976810829,1.42825492201902,1.32521124570968,2.81728838194394,1.15014565221884,4.5960939330501,11.0115880999389,0.383062014255563,0.768032666281217,3.82470234417562,1.55528994124096,2.6045668527838,0.837548997004143,1.12552522006336,0.61119299110724,1.47314292736834,1.70846016958924,0.372798891650601,0.075726193333184,0,0,0,0,6.47643829965381,5.84798775702902,3.58421509677868,0.140444420131752,0,0,0,0,0,0,0,0.649473123033642,0.253359865475099,2.02209778005913,0,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0,0,0,0,0.162241263067758,0,0,0.252722758433675,0,0,0.229902104433473,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296452627087149,0,0,0,0.202860121388503,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144649058581512,3.01582567878545,0.54390568381871,0,0,0.160550589987792,0,0,0,0.315508219416257,0.390438744296638,0.215423397732799,0.716906393857656,1.55959071857676,1.13230612315533,0,0.292255857911312,0.790575555893047,0,0,0,0,0,0,0,0.302323556964751,0,0,0.307435147943927,0,0,0,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0.220528398054962,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149516546043979,0.165458490457098,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0,0.358855426437903,0.167884616364078,0,0,0,0,0,2.25900737046827,1.38097570952153,4.01026859407578,0.68741272937475,6.85082519770642,6.0431511791176,5.40018000185445,2.70192721934532,0.453142408984205,4.14208249401456,0,0.399024873401031,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233931608445408,0,0,0.220591419119515,0 | |||
|short_description=p1@ENSMUST00000083009 | |||
}} |
Revision as of 20:28, 13 September 2013
Short description: | p1@ENSMUST00000083009 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_ENSMUST00000083009_5end |
Coexpression cluster: | MCL_coexpression_mm9:370 |
Association with transcript: | 0bp_to_ENSMUST00000083009_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.80e-22 | 43 |
ectodermal cell | 1.68e-21 | 44 |
neurectodermal cell | 1.68e-21 | 44 |
CNS neuron (sensu Vertebrata) | 1.68e-20 | 23 |
neuroblast (sensu Vertebrata) | 1.68e-20 | 23 |
embryonic cell | 9.86e-20 | 70 |
electrically responsive cell | 1.47e-16 | 39 |
electrically active cell | 1.47e-16 | 39 |
neuron | 1.67e-16 | 33 |
neuronal stem cell | 1.67e-16 | 33 |
neuroblast | 1.67e-16 | 33 |
electrically signaling cell | 1.67e-16 | 33 |
somatic stem cell | 4.29e-15 | 91 |
multi fate stem cell | 4.29e-15 | 91 |
stem cell | 1.11e-13 | 97 |
oligodendrocyte precursor cell | 2.39e-08 | 8 |
oligodendrocyte | 3.86e-08 | 6 |
macroglial cell | 3.86e-08 | 6 |
astrocyte | 3.86e-08 | 6 |
neuron of cerebral cortex | 4.15e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.