FFCP PHASE1:Mm9::chr1:99944370..99944394,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=78603|HGNC=|MCL_coexpression_id=2|UniProt=|association_with_transcript=0bp_to_ENSMUST00000161661,NR_037993_5end|description=CAGE_peak_2_at_B230216N24Rik_5end|id=chr1:99944370..99944394,-|ontology_enrichment_celltype=CL:0000540!2.02e-14!33;CL:0000047!2.02e-14!33;CL:0000031!2.02e-14!33;CL:0000404!2.02e-14!33;CL:0000117!1.09e-12!23;CL:0000337!1.09e-12!23;CL:0000393!2.11e-10!39;CL:0000211!2.11e-10!39;CL:0002319!1.66e-09!43;CL:0000221!4.88e-09!44;CL:0000133!4.88e-09!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-18,23;CL:0000337,1.83e-18,23;CL:0000540,7.67e-17,33;CL:0000047,7.67e-17,33;CL:0000031,7.67e-17,33;CL:0000404,7.67e-17,33;CL:0000393,1.52e-13,39;CL:0000211,1.52e-13,39;CL:0002319,7.30e-12,43;CL:0000221,1.72e-11,44;CL:0000133,1.72e-11,44;CL:0002614,5.13e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.71e-28!73;UBERON:0005743!2.71e-28!73;UBERON:0000073!1.33e-27!75;UBERON:0001016!1.33e-27!75;UBERON:0004121!1.65e-25!102;UBERON:0000924!1.65e-25!102;UBERON:0006601!1.65e-25!102;UBERON:0002346!3.52e-25!71;UBERON:0003075!3.52e-25!71;UBERON:0007284!3.52e-25!71;UBERON:0001049!1.29e-22!52;UBERON:0005068!1.29e-22!52;UBERON:0006241!1.29e-22!52;UBERON:0007135!1.29e-22!52;UBERON:0000955!2.32e-21!50;UBERON:0006238!2.32e-21!50;UBERON:0002616!1.31e-20!49;UBERON:0003080!1.94e-19!40;UBERON:0002780!1.23e-18!39;UBERON:0001890!1.23e-18!39;UBERON:0006240!1.23e-18!39;UBERON:0002020!4.72e-18!34;UBERON:0003056!1.29e-16!49;UBERON:0000033!1.89e-16!63;UBERON:0002791!1.13e-14!29;UBERON:0003528!1.13e-14!29;UBERON:0001893!1.13e-14!29;UBERON:0002021!3.46e-10!10;UBERON:0000411!3.46e-10!10;UBERON:0001950!3.46e-10!10;UBERON:0000956!1.00e-09!21;UBERON:0001869!1.00e-09!21;UBERON:0000203!1.00e-09!21;UBERON:0002619!2.01e-08!17;UBERON:0007811!6.26e-08!86|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.24e-45,73;UBERON:0001016,2.50e-43,75;UBERON:0000073,1.22e-40,54;UBERON:0001049,3.04e-37,52;UBERON:0005068,3.04e-37,52;UBERON:0006241,3.04e-37,52;UBERON:0007135,3.04e-37,52;UBERON:0004121,2.57e-32,95;UBERON:0000924,2.57e-32,95;UBERON:0006601,2.57e-32,95;UBERON:0000955,9.34e-32,47;UBERON:0006238,9.34e-32,47;UBERON:0002346,1.11e-30,64;UBERON:0003075,1.11e-30,64;UBERON:0007284,1.11e-30,64;UBERON:0003080,1.13e-30,40;UBERON:0002616,3.86e-30,46;UBERON:0002780,6.37e-29,39;UBERON:0001890,6.37e-29,39;UBERON:0006240,6.37e-29,39;UBERON:0002020,1.16e-28,34;UBERON:0010371,6.89e-26,73;UBERON:0003056,8.55e-24,49;UBERON:0003528,2.37e-23,29;UBERON:0002791,2.37e-23,29;UBERON:0001893,2.37e-23,29;UBERON:0002021,1.31e-22,10;UBERON:0000411,1.31e-22,10;UBERON:0001950,1.31e-22,10;UBERON:0010314,3.57e-20,92;UBERON:0002619,8.00e-15,17;UBERON:0000956,9.33e-14,21;UBERON:0001869,9.33e-14,21;UBERON:0000203,9.33e-14,21;UBERON:0000025,1.23e-12,114;UBERON:0002420,2.37e-11,8;UBERON:0007245,2.37e-11,8;UBERON:0010009,2.37e-11,8;UBERON:0010011,2.37e-11,8;UBERON:0000454,2.37e-11,8;UBERON:0004111,2.74e-11,122;UBERON:0011216,3.96e-11,194;UBERON:0002950,6.81e-09,4;UBERON:0001891,6.81e-09,4;UBERON:0009616,6.81e-09,4;UBERON:0010286,6.81e-09,4;UBERON:0002240,4.91e-08,6;UBERON:0005174,4.91e-08,6;UBERON:0001137,4.91e-08,6;UBERON:0002038,5.13e-07,3;UBERON:0009663,5.13e-07,3;UBERON:0009661,5.13e-07,3;UBERON:0000125,5.13e-07,3;UBERON:0002308,5.13e-07,3;UBERON:0003076,5.59e-07,12;UBERON:0003057,5.59e-07,12|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,4.43681982454325,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.420649922702764,3.71346279724945,2.65042249141936,0.244981598429908,0.383381884072945,0,4.40463523997555,2.29837208553338,3.07213066512487,3.03338461779446,1.64677758484337,1.04182674111352,2.51264699101243,10.6924895906019,8.55670187550137,0.883885756421003,3.98640706237488,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.693941307064543,0.913396434936424,0.461230994512117,0.753613202763113,1.29347577849275,0.251333182659351,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,4.6435098215495,3.66000482254901,0.251308704225729,9.03886464999838,11.5071955798649,3.1168206683934,5.353961681236,0.611036183101898,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,0.720332286654991,0,0.264450566663544,0.213288250535234,0,0.38660238396628,0.605050573870028,0,0.951128130562796,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.87538698547525,0,0,0.94652465824877,0.390438744296638,1.50796378412959,0.238968797952552,0.222798674082394,0.566153061577665,0,1.16902343164525,1.97643888973262,3.21321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,4.42571487479924,0.18006109403131,0,0.214337035031592,1.41872186913819,1.24858172321449,0.658196082408484,2.74018454203139,0,0,0.441056796109924,0,0,0.0603129249281559,0.358117032009409,0.492422699235184,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,10.7302850097243,12.4287813856938,14.8952833494243,12.3734291287455,13.0165678756422,18.1294535373528,15.5255175053315,13.5096360967266,12.2348450425735,12.4262474820437,0.103787347584177,0,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0.50695859978048,0.565879024158229,0.561849044819294,0.128050304809739,0.459483751644906,0.952587382566147,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0,0.290692833264657,0.658765662907314,0.507687647350059,0.182927972872773,0.263069711437843,0.543216455383447,0,0.118635018124174,0.29551344712669,0.818462086339379,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0|short_description=p2@B230216N24Rik}} | ||
|EntrezGene=78603 | |||
|HGNC= | |||
|MCL_coexpression_id=2 | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENSMUST00000161661,NR_037993_5end | |||
|description=CAGE_peak_2_at_B230216N24Rik_5end | |||
|id=chr1:99944370..99944394,- | |||
|ontology_enrichment_celltype=CL:0000540!2.02e-14!33;CL:0000047!2.02e-14!33;CL:0000031!2.02e-14!33;CL:0000404!2.02e-14!33;CL:0000117!1.09e-12!23;CL:0000337!1.09e-12!23;CL:0000393!2.11e-10!39;CL:0000211!2.11e-10!39;CL:0002319!1.66e-09!43;CL:0000221!4.88e-09!44;CL:0000133!4.88e-09!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.83e-18,23;CL:0000337,1.83e-18,23;CL:0000540,7.67e-17,33;CL:0000047,7.67e-17,33;CL:0000031,7.67e-17,33;CL:0000404,7.67e-17,33;CL:0000393,1.52e-13,39;CL:0000211,1.52e-13,39;CL:0002319,7.30e-12,43;CL:0000221,1.72e-11,44;CL:0000133,1.72e-11,44;CL:0002614,5.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.71e-28!73;UBERON:0005743!2.71e-28!73;UBERON:0000073!1.33e-27!75;UBERON:0001016!1.33e-27!75;UBERON:0004121!1.65e-25!102;UBERON:0000924!1.65e-25!102;UBERON:0006601!1.65e-25!102;UBERON:0002346!3.52e-25!71;UBERON:0003075!3.52e-25!71;UBERON:0007284!3.52e-25!71;UBERON:0001049!1.29e-22!52;UBERON:0005068!1.29e-22!52;UBERON:0006241!1.29e-22!52;UBERON:0007135!1.29e-22!52;UBERON:0000955!2.32e-21!50;UBERON:0006238!2.32e-21!50;UBERON:0002616!1.31e-20!49;UBERON:0003080!1.94e-19!40;UBERON:0002780!1.23e-18!39;UBERON:0001890!1.23e-18!39;UBERON:0006240!1.23e-18!39;UBERON:0002020!4.72e-18!34;UBERON:0003056!1.29e-16!49;UBERON:0000033!1.89e-16!63;UBERON:0002791!1.13e-14!29;UBERON:0003528!1.13e-14!29;UBERON:0001893!1.13e-14!29;UBERON:0002021!3.46e-10!10;UBERON:0000411!3.46e-10!10;UBERON:0001950!3.46e-10!10;UBERON:0000956!1.00e-09!21;UBERON:0001869!1.00e-09!21;UBERON:0000203!1.00e-09!21;UBERON:0002619!2.01e-08!17;UBERON:0007811!6.26e-08!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.24e-45,73;UBERON:0001016,2.50e-43,75;UBERON:0000073,1.22e-40,54;UBERON:0001049,3.04e-37,52;UBERON:0005068,3.04e-37,52;UBERON:0006241,3.04e-37,52;UBERON:0007135,3.04e-37,52;UBERON:0004121,2.57e-32,95;UBERON:0000924,2.57e-32,95;UBERON:0006601,2.57e-32,95;UBERON:0000955,9.34e-32,47;UBERON:0006238,9.34e-32,47;UBERON:0002346,1.11e-30,64;UBERON:0003075,1.11e-30,64;UBERON:0007284,1.11e-30,64;UBERON:0003080,1.13e-30,40;UBERON:0002616,3.86e-30,46;UBERON:0002780,6.37e-29,39;UBERON:0001890,6.37e-29,39;UBERON:0006240,6.37e-29,39;UBERON:0002020,1.16e-28,34;UBERON:0010371,6.89e-26,73;UBERON:0003056,8.55e-24,49;UBERON:0003528,2.37e-23,29;UBERON:0002791,2.37e-23,29;UBERON:0001893,2.37e-23,29;UBERON:0002021,1.31e-22,10;UBERON:0000411,1.31e-22,10;UBERON:0001950,1.31e-22,10;UBERON:0010314,3.57e-20,92;UBERON:0002619,8.00e-15,17;UBERON:0000956,9.33e-14,21;UBERON:0001869,9.33e-14,21;UBERON:0000203,9.33e-14,21;UBERON:0000025,1.23e-12,114;UBERON:0002420,2.37e-11,8;UBERON:0007245,2.37e-11,8;UBERON:0010009,2.37e-11,8;UBERON:0010011,2.37e-11,8;UBERON:0000454,2.37e-11,8;UBERON:0004111,2.74e-11,122;UBERON:0011216,3.96e-11,194;UBERON:0002950,6.81e-09,4;UBERON:0001891,6.81e-09,4;UBERON:0009616,6.81e-09,4;UBERON:0010286,6.81e-09,4;UBERON:0002240,4.91e-08,6;UBERON:0005174,4.91e-08,6;UBERON:0001137,4.91e-08,6;UBERON:0002038,5.13e-07,3;UBERON:0009663,5.13e-07,3;UBERON:0009661,5.13e-07,3;UBERON:0000125,5.13e-07,3;UBERON:0002308,5.13e-07,3;UBERON:0003076,5.59e-07,12;UBERON:0003057,5.59e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,2.22548106945558,3.1739458756322,4.43681982454325,0,0,0,0,0,0,0,0.311068836925433,0.135005938331691,0.420649922702764,3.71346279724945,2.65042249141936,0.244981598429908,0.383381884072945,0,4.40463523997555,2.29837208553338,3.07213066512487,3.03338461779446,1.64677758484337,1.04182674111352,2.51264699101243,10.6924895906019,8.55670187550137,0.883885756421003,3.98640706237488,1.4911955666024,0.075726193333184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.29688427812965,0.693941307064543,0.913396434936424,0.461230994512117,0.753613202763113,1.29347577849275,0.251333182659351,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0,4.6435098215495,3.66000482254901,0.251308704225729,9.03886464999838,11.5071955798649,3.1168206683934,5.353961681236,0.611036183101898,0,0,0.210441855886474,0,0,0,0.150704817835715,0.0680364991513279,0.12811372028485,0.187403449119458,0,0.215567992932842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.99550902271842,0.720332286654991,0,0.264450566663544,0.213288250535234,0,0.38660238396628,0.605050573870028,0,0.951128130562796,0.474529061544512,0.494096864172033,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,0.189491411770485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0871576698413,1.87538698547525,0,0,0.94652465824877,0.390438744296638,1.50796378412959,0.238968797952552,0.222798674082394,0.566153061577665,0,1.16902343164525,1.97643888973262,3.21321316421807,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0,0,0.632073515871632,0,0,4.42571487479924,0.18006109403131,0,0.214337035031592,1.41872186913819,1.24858172321449,0.658196082408484,2.74018454203139,0,0,0.441056796109924,0,0,0.0603129249281559,0.358117032009409,0.492422699235184,0,2.78137953015765,0,0,0,0,0,0,0,0,0,0,0.790839983952838,0.203319467126849,0.324016022465404,0.209088296014469,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0.388844919875379,0,0,0,0.165458490457098,0,0,0,0.234714477291508,0,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.386379188064381,0,0.183151624267265,0,0,10.7302850097243,12.4287813856938,14.8952833494243,12.3734291287455,13.0165678756422,18.1294535373528,15.5255175053315,13.5096360967266,12.2348450425735,12.4262474820437,0.103787347584177,0,0.341467211508268,0,0.419226325255965,0,0.44449345560323,0.412070114477788,0.320919209591815,0,0.50695859978048,0.565879024158229,0.561849044819294,0.128050304809739,0.459483751644906,0.952587382566147,0.231768651889711,0.38581844092741,0.412085900803307,0.294397840268795,0.685738504770831,0.532427418478012,0,0.290692833264657,0.658765662907314,0.507687647350059,0.182927972872773,0.263069711437843,0.543216455383447,0,0.118635018124174,0.29551344712669,0.818462086339379,0.464810523557898,0.192906610981141,0.249810577937946,0.467863216890817,0.214871054048298,0.382576664137687,0.220591419119515,0 | |||
|short_description=p2@B230216N24Rik | |||
}} |
Revision as of 21:24, 13 September 2013
Short description: | p2@B230216N24Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_B230216N24Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:2 |
Association with transcript: | 0bp_to_ENSMUST00000161661, NR_037993_5end |
EntrezGene: | B230216N24Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.83e-18 | 23 |
neuroblast (sensu Vertebrata) | 1.83e-18 | 23 |
neuron | 7.67e-17 | 33 |
neuronal stem cell | 7.67e-17 | 33 |
neuroblast | 7.67e-17 | 33 |
electrically signaling cell | 7.67e-17 | 33 |
electrically responsive cell | 1.52e-13 | 39 |
electrically active cell | 1.52e-13 | 39 |
neural cell | 7.30e-12 | 43 |
ectodermal cell | 1.72e-11 | 44 |
neurectodermal cell | 1.72e-11 | 44 |
neuron of the substantia nigra | 5.13e-07 | 3 |
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