FFCP PHASE1:Mm9::chr2:61884680..61884691,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=94229|HGNC=|MCL_coexpression_id=1|UniProt=Q5DTL9|association_with_transcript=-10bp_to_ENSMUST00000112480_5end|description=CAGE_peak_5_at_Slc4a10_5end|id=chr2:61884680..61884691,+|ontology_enrichment_celltype=CL:0000117!2.55e-13!23;CL:0000337!2.55e-13!23;CL:0000540!1.26e-07!33;CL:0000047!1.26e-07!33;CL:0000031!1.26e-07!33;CL:0000404!1.26e-07!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-14,23;CL:0000337,1.41e-14,23;CL:0000540,2.58e-09,33;CL:0000047,2.58e-09,33;CL:0000031,2.58e-09,33;CL:0000404,2.58e-09,33;CL:0002610,6.17e-08,3;CL:0002612,6.51e-08,3;CL:0002614,7.67e-08,3;CL:0000393,1.82e-07,39;CL:0000211,1.82e-07,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!4.13e-28!52;UBERON:0005068!4.13e-28!52;UBERON:0006241!4.13e-28!52;UBERON:0007135!4.13e-28!52;UBERON:0000955!5.38e-26!50;UBERON:0006238!5.38e-26!50;UBERON:0001017!1.16e-25!73;UBERON:0005743!1.16e-25!73;UBERON:0002616!5.69e-25!49;UBERON:0000073!1.44e-24!75;UBERON:0001016!1.44e-24!75;UBERON:0002346!2.42e-23!71;UBERON:0003075!2.42e-23!71;UBERON:0007284!2.42e-23!71;UBERON:0000033!1.48e-22!63;UBERON:0002020!3.90e-21!34;UBERON:0003080!3.07e-19!40;UBERON:0004121!4.19e-19!102;UBERON:0000924!4.19e-19!102;UBERON:0006601!4.19e-19!102;UBERON:0003056!2.33e-18!49;UBERON:0002780!4.24e-18!39;UBERON:0001890!4.24e-18!39;UBERON:0006240!4.24e-18!39;UBERON:0002791!3.82e-16!29;UBERON:0003528!3.82e-16!29;UBERON:0001893!3.82e-16!29;UBERON:0007811!4.89e-13!86;UBERON:0002021!9.31e-13!10;UBERON:0000411!9.31e-13!10;UBERON:0001950!9.31e-13!10;UBERON:0000153!6.99e-11!94;UBERON:0003076!1.88e-09!12;UBERON:0003057!1.88e-09!12;UBERON:0002420!2.78e-09!8;UBERON:0007245!2.78e-09!8;UBERON:0010009!2.78e-09!8;UBERON:0010011!2.78e-09!8;UBERON:0000454!2.78e-09!8;UBERON:0000956!5.81e-09!21;UBERON:0001869!5.81e-09!21;UBERON:0000203!5.81e-09!21;UBERON:0002619!6.34e-09!17;UBERON:0002298!3.17e-08!6;UBERON:0002240!8.13e-08!6;UBERON:0005174!8.13e-08!6;UBERON:0001137!8.13e-08!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.50e-40,54;UBERON:0001049,1.28e-36,52;UBERON:0005068,1.28e-36,52;UBERON:0006241,1.28e-36,52;UBERON:0007135,1.28e-36,52;UBERON:0001017,1.44e-34,73;UBERON:0001016,1.85e-33,75;UBERON:0002346,1.42e-30,64;UBERON:0003075,1.42e-30,64;UBERON:0007284,1.42e-30,64;UBERON:0002020,7.64e-30,34;UBERON:0000955,1.70e-27,47;UBERON:0006238,1.70e-27,47;UBERON:0004121,1.42e-26,95;UBERON:0000924,1.42e-26,95;UBERON:0006601,1.42e-26,95;UBERON:0010371,5.72e-26,73;UBERON:0002616,7.83e-26,46;UBERON:0002021,1.52e-23,10;UBERON:0000411,1.52e-23,10;UBERON:0001950,1.52e-23,10;UBERON:0003528,6.61e-21,29;UBERON:0002791,6.61e-21,29;UBERON:0001893,6.61e-21,29;UBERON:0003080,1.36e-20,40;UBERON:0010314,3.36e-19,92;UBERON:0002780,8.60e-19,39;UBERON:0001890,8.60e-19,39;UBERON:0006240,8.60e-19,39;UBERON:0003076,5.98e-18,12;UBERON:0003057,5.98e-18,12;UBERON:0003056,1.26e-17,49;UBERON:0002619,9.37e-16,17;UBERON:0000956,1.18e-14,21;UBERON:0001869,1.18e-14,21;UBERON:0000203,1.18e-14,21;UBERON:0002240,7.69e-14,6;UBERON:0005174,7.69e-14,6;UBERON:0001137,7.69e-14,6;UBERON:0000025,4.55e-13,114;UBERON:0004111,9.00e-12,122;UBERON:0001948,2.14e-11,5;UBERON:0002315,2.14e-11,5;UBERON:0002950,2.53e-10,4;UBERON:0001891,2.53e-10,4;UBERON:0009616,2.53e-10,4;UBERON:0010286,2.53e-10,4;UBERON:0011216,1.83e-08,194;UBERON:0004684,6.17e-08,3;UBERON:0002275,6.17e-08,3;UBERON:0002257,6.51e-08,3;UBERON:0002038,7.67e-08,3;UBERON:0009663,7.67e-08,3;UBERON:0009661,7.67e-08,3;UBERON:0000125,7.67e-08,3;UBERON:0002308,7.67e-08,3;UBERON:0002420,1.96e-07,8;UBERON:0007245,1.96e-07,8;UBERON:0010009,1.96e-07,8;UBERON:0010011,1.96e-07,8;UBERON:0000454,1.96e-07,8;UBERON:0000483,6.30e-07,174;UBERON:0000119,9.03e-07,176|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0,1.42825492201902,1.54607978666129,0,0,0,2.20231761998777,3.31987079021488,3.68655679814984,0.527545150920775,0.823388792421687,3.12548022334056,1.95428099300967,3.37657566019008,3.20876320331301,2.35702868378934,4.27115042397309,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,2.51336048176146,0,0,0,0,5.69204429738326,2.74500361691176,0.753926112677186,2.60736480288415,3.83573185995496,3.32460871295296,4.05603157669394,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,2.69586879162067,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0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| ||
|EntrezGene=94229 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q5DTL9 | |||
|association_with_transcript=-10bp_to_ENSMUST00000112480_5end | |||
|description=CAGE_peak_5_at_Slc4a10_5end | |||
|id=chr2:61884680..61884691,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.55e-13!23;CL:0000337!2.55e-13!23;CL:0000540!1.26e-07!33;CL:0000047!1.26e-07!33;CL:0000031!1.26e-07!33;CL:0000404!1.26e-07!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.41e-14,23;CL:0000337,1.41e-14,23;CL:0000540,2.58e-09,33;CL:0000047,2.58e-09,33;CL:0000031,2.58e-09,33;CL:0000404,2.58e-09,33;CL:0002610,6.17e-08,3;CL:0002612,6.51e-08,3;CL:0002614,7.67e-08,3;CL:0000393,1.82e-07,39;CL:0000211,1.82e-07,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.13e-28!52;UBERON:0005068!4.13e-28!52;UBERON:0006241!4.13e-28!52;UBERON:0007135!4.13e-28!52;UBERON:0000955!5.38e-26!50;UBERON:0006238!5.38e-26!50;UBERON:0001017!1.16e-25!73;UBERON:0005743!1.16e-25!73;UBERON:0002616!5.69e-25!49;UBERON:0000073!1.44e-24!75;UBERON:0001016!1.44e-24!75;UBERON:0002346!2.42e-23!71;UBERON:0003075!2.42e-23!71;UBERON:0007284!2.42e-23!71;UBERON:0000033!1.48e-22!63;UBERON:0002020!3.90e-21!34;UBERON:0003080!3.07e-19!40;UBERON:0004121!4.19e-19!102;UBERON:0000924!4.19e-19!102;UBERON:0006601!4.19e-19!102;UBERON:0003056!2.33e-18!49;UBERON:0002780!4.24e-18!39;UBERON:0001890!4.24e-18!39;UBERON:0006240!4.24e-18!39;UBERON:0002791!3.82e-16!29;UBERON:0003528!3.82e-16!29;UBERON:0001893!3.82e-16!29;UBERON:0007811!4.89e-13!86;UBERON:0002021!9.31e-13!10;UBERON:0000411!9.31e-13!10;UBERON:0001950!9.31e-13!10;UBERON:0000153!6.99e-11!94;UBERON:0003076!1.88e-09!12;UBERON:0003057!1.88e-09!12;UBERON:0002420!2.78e-09!8;UBERON:0007245!2.78e-09!8;UBERON:0010009!2.78e-09!8;UBERON:0010011!2.78e-09!8;UBERON:0000454!2.78e-09!8;UBERON:0000956!5.81e-09!21;UBERON:0001869!5.81e-09!21;UBERON:0000203!5.81e-09!21;UBERON:0002619!6.34e-09!17;UBERON:0002298!3.17e-08!6;UBERON:0002240!8.13e-08!6;UBERON:0005174!8.13e-08!6;UBERON:0001137!8.13e-08!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.50e-40,54;UBERON:0001049,1.28e-36,52;UBERON:0005068,1.28e-36,52;UBERON:0006241,1.28e-36,52;UBERON:0007135,1.28e-36,52;UBERON:0001017,1.44e-34,73;UBERON:0001016,1.85e-33,75;UBERON:0002346,1.42e-30,64;UBERON:0003075,1.42e-30,64;UBERON:0007284,1.42e-30,64;UBERON:0002020,7.64e-30,34;UBERON:0000955,1.70e-27,47;UBERON:0006238,1.70e-27,47;UBERON:0004121,1.42e-26,95;UBERON:0000924,1.42e-26,95;UBERON:0006601,1.42e-26,95;UBERON:0010371,5.72e-26,73;UBERON:0002616,7.83e-26,46;UBERON:0002021,1.52e-23,10;UBERON:0000411,1.52e-23,10;UBERON:0001950,1.52e-23,10;UBERON:0003528,6.61e-21,29;UBERON:0002791,6.61e-21,29;UBERON:0001893,6.61e-21,29;UBERON:0003080,1.36e-20,40;UBERON:0010314,3.36e-19,92;UBERON:0002780,8.60e-19,39;UBERON:0001890,8.60e-19,39;UBERON:0006240,8.60e-19,39;UBERON:0003076,5.98e-18,12;UBERON:0003057,5.98e-18,12;UBERON:0003056,1.26e-17,49;UBERON:0002619,9.37e-16,17;UBERON:0000956,1.18e-14,21;UBERON:0001869,1.18e-14,21;UBERON:0000203,1.18e-14,21;UBERON:0002240,7.69e-14,6;UBERON:0005174,7.69e-14,6;UBERON:0001137,7.69e-14,6;UBERON:0000025,4.55e-13,114;UBERON:0004111,9.00e-12,122;UBERON:0001948,2.14e-11,5;UBERON:0002315,2.14e-11,5;UBERON:0002950,2.53e-10,4;UBERON:0001891,2.53e-10,4;UBERON:0009616,2.53e-10,4;UBERON:0010286,2.53e-10,4;UBERON:0011216,1.83e-08,194;UBERON:0004684,6.17e-08,3;UBERON:0002275,6.17e-08,3;UBERON:0002257,6.51e-08,3;UBERON:0002038,7.67e-08,3;UBERON:0009663,7.67e-08,3;UBERON:0009661,7.67e-08,3;UBERON:0000125,7.67e-08,3;UBERON:0002308,7.67e-08,3;UBERON:0002420,1.96e-07,8;UBERON:0007245,1.96e-07,8;UBERON:0010009,1.96e-07,8;UBERON:0010011,1.96e-07,8;UBERON:0000454,1.96e-07,8;UBERON:0000483,6.30e-07,174;UBERON:0000119,9.03e-07,176 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.207379224616955,0,0,1.42825492201902,1.54607978666129,0,0,0,2.20231761998777,3.31987079021488,3.68655679814984,0.527545150920775,0.823388792421687,3.12548022334056,1.95428099300967,3.37657566019008,3.20876320331301,2.35702868378934,4.27115042397309,2.60959224155421,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,2.51336048176146,0,0,0,0,5.69204429738326,2.74500361691176,0.753926112677186,2.60736480288415,3.83573185995496,3.32460871295296,4.05603157669394,0,0,0,0,0,0,0,0,0.0680364991513279,0.12811372028485,0.187403449119458,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.73376933133365,0.205809224758569,0,0,0.213288250535234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.69266356971921,2.69586879162067,0,0,0,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0,0,0,0.354680467284547,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,4.82105785227325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,2.30162618253588,4.01026859407578,2.749650917499,7.53590771747707,3.0215755895588,2.70009000092722,2.70192721934532,4.07828168085784,5.69536342927002,0,0,0.512200817262403,0.243106717068294,0,0,0.888986911206461,0.412070114477788,0.320919209591815,0.252697211763798,0,0.188626341386076,0.468207537349412,0.128050304809739,0.229741875822453,0,0.463537303779422,0.38581844092741,0.824171801606613,0.441596760403192,0.342869252385415,0.177475806159338,0,0,0.376437521661322,0.338458431566706,0.548783918618318,0.263069711437843,0.271608227691724,1.12228454331548,0.237270036248348,0.29551344712669,0.818462086339379,0,0.385813221962283,0,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421 | |||
|short_description=p5@Slc4a10 | |||
}} |
Revision as of 00:15, 14 September 2013
Short description: | p5@Slc4a10 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Slc4a10_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -10bp_to_ENSMUST00000112480_5end |
EntrezGene: | Slc4a10 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.41e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.41e-14 | 23 |
neuron | 2.58e-09 | 33 |
neuronal stem cell | 2.58e-09 | 33 |
neuroblast | 2.58e-09 | 33 |
electrically signaling cell | 2.58e-09 | 33 |
raphe nuclei neuron | 6.17e-08 | 3 |
neuron of the ventral spinal cord | 6.51e-08 | 3 |
neuron of the substantia nigra | 7.67e-08 | 3 |
electrically responsive cell | 1.82e-07 | 39 |
electrically active cell | 1.82e-07 | 39 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.