FFCP PHASE1:Mm9::chr2:73109983..73109996,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=381373|HGNC=|MCL_coexpression_id=184|UniProt=Q64HY3|association_with_transcript=0bp_to_NM_001005343,uc008kcj.2_5end|description=CAGE_peak_1_at_Sp9_5end|id=chr2:73109983..73109996,+|ontology_enrichment_celltype=CL:0000117!8.81e-20!23;CL:0000337!8.81e-20!23;CL:0000540!2.44e-11!33;CL:0000047!2.44e-11!33;CL:0000031!2.44e-11!33;CL:0000404!2.44e-11!33;CL:0002319!1.16e-10!43;CL:0000221!3.18e-10!44;CL:0000133!3.18e-10!44;CL:0000393!1.84e-08!39;CL:0000211!1.84e-08!39;CL:0002609!4.34e-08!6;CL:0000055!5.29e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-25,23;CL:0000337,2.37e-25,23;CL:0000540,9.98e-16,33;CL:0000047,9.98e-16,33;CL:0000031,9.98e-16,33;CL:0000404,9.98e-16,33;CL:0002319,1.93e-13,43;CL:0000221,5.52e-13,44;CL:0000133,5.52e-13,44;CL:0000393,2.31e-12,39;CL:0000211,2.31e-12,39;CL:0002609,9.32e-11,6|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!8.79e-27!34;UBERON:0002791!1.36e-22!29;UBERON:0003528!1.36e-22!29;UBERON:0001893!1.36e-22!29;UBERON:0001049!1.29e-20!52;UBERON:0005068!1.29e-20!52;UBERON:0006241!1.29e-20!52;UBERON:0007135!1.29e-20!52;UBERON:0001017!1.56e-19!73;UBERON:0005743!1.56e-19!73;UBERON:0003080!6.93e-19!40;UBERON:0000073!1.37e-18!75;UBERON:0001016!1.37e-18!75;UBERON:0002780!1.60e-18!39;UBERON:0001890!1.60e-18!39;UBERON:0006240!1.60e-18!39;UBERON:0000955!3.13e-18!50;UBERON:0006238!3.13e-18!50;UBERON:0002616!2.92e-17!49;UBERON:0003056!3.68e-15!49;UBERON:0000956!4.50e-15!21;UBERON:0001869!4.50e-15!21;UBERON:0000203!4.50e-15!21;UBERON:0000033!1.84e-13!63;UBERON:0002346!5.03e-13!71;UBERON:0003075!5.03e-13!71;UBERON:0007284!5.03e-13!71;UBERON:0004121!1.40e-12!102;UBERON:0000924!1.40e-12!102;UBERON:0006601!1.40e-12!102;UBERON:0002619!3.39e-11!17;UBERON:0000153!7.27e-09!94;UBERON:0002420!9.28e-09!8;UBERON:0007245!9.28e-09!8;UBERON:0010009!9.28e-09!8;UBERON:0010011!9.28e-09!8;UBERON:0000454!9.28e-09!8;UBERON:0000369!5.81e-07!5;UBERON:0002435!5.81e-07!5;UBERON:0000204!5.81e-07!5;UBERON:0010082!5.81e-07!5;UBERON:0007811!7.80e-07!86;UBERON:0002021!9.30e-07!10;UBERON:0000411!9.30e-07!10;UBERON:0001950!9.30e-07!10|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.22e-28,34;UBERON:0003528,4.27e-24,29;UBERON:0002791,4.27e-24,29;UBERON:0001893,4.27e-24,29;UBERON:0000073,3.72e-22,54;UBERON:0001017,1.61e-20,73;UBERON:0001049,3.52e-20,52;UBERON:0005068,3.52e-20,52;UBERON:0006241,3.52e-20,52;UBERON:0007135,3.52e-20,52;UBERON:0002780,9.63e-20,39;UBERON:0001890,9.63e-20,39;UBERON:0006240,9.63e-20,39;UBERON:0001016,1.10e-19,75;UBERON:0003080,4.68e-19,40;UBERON:0000955,2.17e-18,47;UBERON:0006238,2.17e-18,47;UBERON:0002616,3.65e-17,46;UBERON:0002346,1.02e-14,64;UBERON:0003075,1.02e-14,64;UBERON:0007284,1.02e-14,64;UBERON:0003056,3.65e-14,49;UBERON:0000956,3.65e-14,21;UBERON:0001869,3.65e-14,21;UBERON:0000203,3.65e-14,21;UBERON:0004121,2.66e-13,95;UBERON:0000924,2.66e-13,95;UBERON:0006601,2.66e-13,95;UBERON:0010371,7.82e-12,73;UBERON:0002420,1.07e-11,8;UBERON:0007245,1.07e-11,8;UBERON:0010009,1.07e-11,8;UBERON:0010011,1.07e-11,8;UBERON:0000454,1.07e-11,8;UBERON:0002619,2.65e-09,17;UBERON:0000369,3.56e-09,5;UBERON:0002435,3.56e-09,5;UBERON:0000204,3.56e-09,5;UBERON:0010082,3.56e-09,5;UBERON:0010314,1.07e-07,92|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,0.219686182734472,0,0,0,0,0,0,0,0,0,3.64169629547276,1.05798195854407,2.53532561402472,0,0,0,0,0,0.599200221036809,3.45796474789399,6.32506635081714,7.69533848490637,6.94072372459561,2.57085885963423,0.883474163806454,47.893902493047,71.6924123216408,67.1029714225315,0,1.40456071893706,1.68967186581868,17.9365351313064,12.6252948171325,12.5019208933622,1.11673199600552,1.12552522006336,1.5279824777681,2.06240009831567,1.42371680799103,2.42319279572891,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,7.32000964509802,47.4973450986627,1.91206752211504,0.511430914660661,2.90903262383384,5.19172041816825,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0,0,0,0,1.29340795759705,1.13463648100692,1.75951124163949,0.219195732427575,1.66828349535359,0,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,6.27718135513635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.276275845119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,1.14579102687879,1.71853182343688,0.685082519770642,2.2661816921691,0,0.900642406448441,0.906284817968409,2.07104124700728,0.726511433089237,0.798049746802062,1.1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| ||
|EntrezGene=381373 | |||
|HGNC= | |||
|MCL_coexpression_id=184 | |||
|UniProt=Q64HY3 | |||
|association_with_transcript=0bp_to_NM_001005343,uc008kcj.2_5end | |||
|description=CAGE_peak_1_at_Sp9_5end | |||
|id=chr2:73109983..73109996,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.81e-20!23;CL:0000337!8.81e-20!23;CL:0000540!2.44e-11!33;CL:0000047!2.44e-11!33;CL:0000031!2.44e-11!33;CL:0000404!2.44e-11!33;CL:0002319!1.16e-10!43;CL:0000221!3.18e-10!44;CL:0000133!3.18e-10!44;CL:0000393!1.84e-08!39;CL:0000211!1.84e-08!39;CL:0002609!4.34e-08!6;CL:0000055!5.29e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-25,23;CL:0000337,2.37e-25,23;CL:0000540,9.98e-16,33;CL:0000047,9.98e-16,33;CL:0000031,9.98e-16,33;CL:0000404,9.98e-16,33;CL:0002319,1.93e-13,43;CL:0000221,5.52e-13,44;CL:0000133,5.52e-13,44;CL:0000393,2.31e-12,39;CL:0000211,2.31e-12,39;CL:0002609,9.32e-11,6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!8.79e-27!34;UBERON:0002791!1.36e-22!29;UBERON:0003528!1.36e-22!29;UBERON:0001893!1.36e-22!29;UBERON:0001049!1.29e-20!52;UBERON:0005068!1.29e-20!52;UBERON:0006241!1.29e-20!52;UBERON:0007135!1.29e-20!52;UBERON:0001017!1.56e-19!73;UBERON:0005743!1.56e-19!73;UBERON:0003080!6.93e-19!40;UBERON:0000073!1.37e-18!75;UBERON:0001016!1.37e-18!75;UBERON:0002780!1.60e-18!39;UBERON:0001890!1.60e-18!39;UBERON:0006240!1.60e-18!39;UBERON:0000955!3.13e-18!50;UBERON:0006238!3.13e-18!50;UBERON:0002616!2.92e-17!49;UBERON:0003056!3.68e-15!49;UBERON:0000956!4.50e-15!21;UBERON:0001869!4.50e-15!21;UBERON:0000203!4.50e-15!21;UBERON:0000033!1.84e-13!63;UBERON:0002346!5.03e-13!71;UBERON:0003075!5.03e-13!71;UBERON:0007284!5.03e-13!71;UBERON:0004121!1.40e-12!102;UBERON:0000924!1.40e-12!102;UBERON:0006601!1.40e-12!102;UBERON:0002619!3.39e-11!17;UBERON:0000153!7.27e-09!94;UBERON:0002420!9.28e-09!8;UBERON:0007245!9.28e-09!8;UBERON:0010009!9.28e-09!8;UBERON:0010011!9.28e-09!8;UBERON:0000454!9.28e-09!8;UBERON:0000369!5.81e-07!5;UBERON:0002435!5.81e-07!5;UBERON:0000204!5.81e-07!5;UBERON:0010082!5.81e-07!5;UBERON:0007811!7.80e-07!86;UBERON:0002021!9.30e-07!10;UBERON:0000411!9.30e-07!10;UBERON:0001950!9.30e-07!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,6.22e-28,34;UBERON:0003528,4.27e-24,29;UBERON:0002791,4.27e-24,29;UBERON:0001893,4.27e-24,29;UBERON:0000073,3.72e-22,54;UBERON:0001017,1.61e-20,73;UBERON:0001049,3.52e-20,52;UBERON:0005068,3.52e-20,52;UBERON:0006241,3.52e-20,52;UBERON:0007135,3.52e-20,52;UBERON:0002780,9.63e-20,39;UBERON:0001890,9.63e-20,39;UBERON:0006240,9.63e-20,39;UBERON:0001016,1.10e-19,75;UBERON:0003080,4.68e-19,40;UBERON:0000955,2.17e-18,47;UBERON:0006238,2.17e-18,47;UBERON:0002616,3.65e-17,46;UBERON:0002346,1.02e-14,64;UBERON:0003075,1.02e-14,64;UBERON:0007284,1.02e-14,64;UBERON:0003056,3.65e-14,49;UBERON:0000956,3.65e-14,21;UBERON:0001869,3.65e-14,21;UBERON:0000203,3.65e-14,21;UBERON:0004121,2.66e-13,95;UBERON:0000924,2.66e-13,95;UBERON:0006601,2.66e-13,95;UBERON:0010371,7.82e-12,73;UBERON:0002420,1.07e-11,8;UBERON:0007245,1.07e-11,8;UBERON:0010009,1.07e-11,8;UBERON:0010011,1.07e-11,8;UBERON:0000454,1.07e-11,8;UBERON:0002619,2.65e-09,17;UBERON:0000369,3.56e-09,5;UBERON:0002435,3.56e-09,5;UBERON:0000204,3.56e-09,5;UBERON:0010082,3.56e-09,5;UBERON:0010314,1.07e-07,92 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02051948181284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,0.219686182734472,0,0,0,0,0,0,0,0,0,3.64169629547276,1.05798195854407,2.53532561402472,0,0,0,0,0,0.599200221036809,3.45796474789399,6.32506635081714,7.69533848490637,6.94072372459561,2.57085885963423,0.883474163806454,47.893902493047,71.6924123216408,67.1029714225315,0,1.40456071893706,1.68967186581868,17.9365351313064,12.6252948171325,12.5019208933622,1.11673199600552,1.12552522006336,1.5279824777681,2.06240009831567,1.42371680799103,2.42319279572891,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.149790639404823,7.32000964509802,47.4973450986627,1.91206752211504,0.511430914660661,2.90903262383384,5.19172041816825,0,0,0,0,0.130120442962704,0,0.180062129805349,0,0,0,0,0,1.29340795759705,1.13463648100692,1.75951124163949,0.219195732427575,1.66828349535359,0,1.02891068203972,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,6.27718135513635,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,28.276275845119,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0.120625849856312,0.119372344003136,0,0,0.18542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0.165458490457098,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.30162618253588,1.14579102687879,1.71853182343688,0.685082519770642,2.2661816921691,0,0.900642406448441,0.906284817968409,2.07104124700728,0.726511433089237,0.798049746802062,1.19513524027894,1.70174701947806,1.04806581313991,1.47074806760011,1.11123363900808,0.618105171716683,0.962757628775446,2.27427490587418,1.2673964994512,1.32038438970253,1.21733959710847,1.28050304809739,1.49332219284595,2.85776214769844,1.50649623728312,0.77163688185482,0.824171801606613,0.735994600671987,0.342869252385415,0.532427418478012,0.715308569841963,0.726732083161643,1.12931256498397,1.35383372626682,0.914639864363863,0.526139422875686,1.22223702461276,0,1.30498519936592,1.47756723563345,0,1.08455788830176,1.54325288784913,5.24602213669686,1.40358965067245,0.859484216193193,0,0,0 | |||
|short_description=p1@Sp9 | |||
}} |
Revision as of 00:29, 14 September 2013
Short description: | p1@Sp9 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sp9_5end |
Coexpression cluster: | MCL_coexpression_mm9:184 |
Association with transcript: | 0bp_to_NM_001005343, uc008kcj.2_5end |
EntrezGene: | Sp9 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.37e-25 | 23 |
neuroblast (sensu Vertebrata) | 2.37e-25 | 23 |
neuron | 9.98e-16 | 33 |
neuronal stem cell | 9.98e-16 | 33 |
neuroblast | 9.98e-16 | 33 |
electrically signaling cell | 9.98e-16 | 33 |
neural cell | 1.93e-13 | 43 |
ectodermal cell | 5.52e-13 | 44 |
neurectodermal cell | 5.52e-13 | 44 |
electrically responsive cell | 2.31e-12 | 39 |
electrically active cell | 2.31e-12 | 39 |
neuron of cerebral cortex | 9.32e-11 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.