FFCP PHASE1:Mm9::chr3:108394413..108394435,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=99512|HGNC=|MCL_coexpression_id=1|UniProt=A2AGC6|association_with_transcript=104bp_to_ENSMUST00000139626_5end|description=CAGE_peak_4_at_Wdr47_5end|id=chr3:108394413..108394435,+|ontology_enrichment_celltype=CL:0000540!4.05e-11!33;CL:0000047!4.05e-11!33;CL:0000031!4.05e-11!33;CL:0000404!4.05e-11!33;CL:0000393!7.93e-11!39;CL:0000211!7.93e-11!39;CL:0002319!2.53e-10!43;CL:0000221!3.42e-10!44;CL:0000133!3.42e-10!44;CL:0000055!1.08e-09!50;CL:0000117!1.65e-09!23;CL:0000337!1.65e-09!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.66e-16,23;CL:0000337,4.66e-16,23;CL:0000540,6.86e-15,33;CL:0000047,6.86e-15,33;CL:0000031,6.86e-15,33;CL:0000404,6.86e-15,33;CL:0000393,4.24e-14,39;CL:0000211,4.24e-14,39;CL:0002319,5.43e-10,43;CL:0000221,1.25e-09,44;CL:0000133,1.25e-09,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.33e-22!75;UBERON:0001016!1.33e-22!75;UBERON:0004121!1.44e-22!102;UBERON:0000924!1.44e-22!102;UBERON:0006601!1.44e-22!102;UBERON:0001017!3.89e-22!73;UBERON:0005743!3.89e-22!73;UBERON:0002020!3.96e-17!34;UBERON:0000955!3.98e-17!50;UBERON:0006238!3.98e-17!50;UBERON:0001049!6.16e-17!52;UBERON:0005068!6.16e-17!52;UBERON:0006241!6.16e-17!52;UBERON:0007135!6.16e-17!52;UBERON:0000033!1.04e-16!63;UBERON:0002616!1.54e-16!49;UBERON:0002791!1.15e-15!29;UBERON:0003528!1.15e-15!29;UBERON:0001893!1.15e-15!29;UBERON:0002346!1.29e-15!71;UBERON:0003075!1.29e-15!71;UBERON:0007284!1.29e-15!71;UBERON:0003056!7.94e-14!49;UBERON:0003080!9.02e-14!40;UBERON:0002780!3.92e-13!39;UBERON:0001890!3.92e-13!39;UBERON:0006240!3.92e-13!39;UBERON:0000956!2.20e-11!21;UBERON:0001869!2.20e-11!21;UBERON:0000203!2.20e-11!21;UBERON:0002619!1.34e-09!17;UBERON:0002021!1.81e-08!10;UBERON:0000411!1.81e-08!10;UBERON:0001950!1.81e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.37e-33,73;UBERON:0000073,7.54e-33,54;UBERON:0001016,5.97e-32,75;UBERON:0004121,8.17e-31,95;UBERON:0000924,8.17e-31,95;UBERON:0006601,8.17e-31,95;UBERON:0001049,3.32e-30,52;UBERON:0005068,3.32e-30,52;UBERON:0006241,3.32e-30,52;UBERON:0007135,3.32e-30,52;UBERON:0002020,7.80e-30,34;UBERON:0010371,9.75e-30,73;UBERON:0002346,9.74e-29,64;UBERON:0003075,9.74e-29,64;UBERON:0007284,9.74e-29,64;UBERON:0000955,6.93e-27,47;UBERON:0006238,6.93e-27,47;UBERON:0003528,7.18e-27,29;UBERON:0002791,7.18e-27,29;UBERON:0001893,7.18e-27,29;UBERON:0002616,1.02e-25,46;UBERON:0003080,5.11e-23,40;UBERON:0002780,9.73e-22,39;UBERON:0001890,9.73e-22,39;UBERON:0006240,9.73e-22,39;UBERON:0003056,2.31e-20,49;UBERON:0000956,5.48e-18,21;UBERON:0001869,5.48e-18,21;UBERON:0000203,5.48e-18,21;UBERON:0010314,2.39e-17,92;UBERON:0002021,3.68e-16,10;UBERON:0000411,3.68e-16,10;UBERON:0001950,3.68e-16,10;UBERON:0002619,4.73e-16,17;UBERON:0002420,5.12e-10,8;UBERON:0007245,5.12e-10,8;UBERON:0010009,5.12e-10,8;UBERON:0010011,5.12e-10,8;UBERON:0000454,5.12e-10,8;UBERON:0000025,2.78e-09,114;UBERON:0004111,5.30e-08,122;UBERON:0003076,1.50e-07,12;UBERON:0003057,1.50e-07,12|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0.30246421130683,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0.157731082679119,0,0,1.78590909317247,0,0,0,0,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,1.25896817975577,0.405507724878058,0.367093504323363,0,0.218025156380447,0.659058548203415,0.972149495371417,0.699932108126813,0,0.335565212115473,0,0.336093799142464,0.257259436035947,1.43266719969378,0,1.01158230429799,2.11596391708813,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.14058573539325,0.945041568321835,1.47227472945967,1.71390590642282,0.220868540951614,1.71487118900936,1.15014565221884,0,3.30347642998166,5.61824287574826,5.68344173048101,2.1101806036831,1.9212405156506,1.04182674111352,3.07101298901519,2.8138130501584,4.27835093775068,1.47314292736834,2.13557521198654,1.4911955666024,0.454357159999104,0.755715601067855,0.579728977403356,0,0,0,0,0.448026887097336,0.140444420131752,0.681721290312231,0.259786004602869,0,0.281686839553361,0,0,0,0.432982082022428,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.86759614151947,0,0.323533699894818,0.220841518460394,0,0,1.17112318804619,2.09446706813455,0.255457055208591,0.11981512450592,0,0.127070227073065,6.74057877321702,4.11750542536764,1.88481528169297,7.99591872884472,7.67146371990992,4.98691306942944,4.86723789203273,0,0,0,2.31486041475121,0.130120442962704,0,0.180062129805349,0.452114453507145,0.476255494059295,0.512454881139399,0.562210347358373,3.3631438196072,0,0,0,0.43839146485515,0.556094498451196,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0,0,0.473489471170421,0,0,0.465067889500816,0,0.233530684734339,0,0,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,6.72927835405207,4.21908910755066,0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| ||
|EntrezGene=99512 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=A2AGC6 | |||
|association_with_transcript=104bp_to_ENSMUST00000139626_5end | |||
|description=CAGE_peak_4_at_Wdr47_5end | |||
|id=chr3:108394413..108394435,+ | |||
|ontology_enrichment_celltype=CL:0000540!4.05e-11!33;CL:0000047!4.05e-11!33;CL:0000031!4.05e-11!33;CL:0000404!4.05e-11!33;CL:0000393!7.93e-11!39;CL:0000211!7.93e-11!39;CL:0002319!2.53e-10!43;CL:0000221!3.42e-10!44;CL:0000133!3.42e-10!44;CL:0000055!1.08e-09!50;CL:0000117!1.65e-09!23;CL:0000337!1.65e-09!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.66e-16,23;CL:0000337,4.66e-16,23;CL:0000540,6.86e-15,33;CL:0000047,6.86e-15,33;CL:0000031,6.86e-15,33;CL:0000404,6.86e-15,33;CL:0000393,4.24e-14,39;CL:0000211,4.24e-14,39;CL:0002319,5.43e-10,43;CL:0000221,1.25e-09,44;CL:0000133,1.25e-09,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.33e-22!75;UBERON:0001016!1.33e-22!75;UBERON:0004121!1.44e-22!102;UBERON:0000924!1.44e-22!102;UBERON:0006601!1.44e-22!102;UBERON:0001017!3.89e-22!73;UBERON:0005743!3.89e-22!73;UBERON:0002020!3.96e-17!34;UBERON:0000955!3.98e-17!50;UBERON:0006238!3.98e-17!50;UBERON:0001049!6.16e-17!52;UBERON:0005068!6.16e-17!52;UBERON:0006241!6.16e-17!52;UBERON:0007135!6.16e-17!52;UBERON:0000033!1.04e-16!63;UBERON:0002616!1.54e-16!49;UBERON:0002791!1.15e-15!29;UBERON:0003528!1.15e-15!29;UBERON:0001893!1.15e-15!29;UBERON:0002346!1.29e-15!71;UBERON:0003075!1.29e-15!71;UBERON:0007284!1.29e-15!71;UBERON:0003056!7.94e-14!49;UBERON:0003080!9.02e-14!40;UBERON:0002780!3.92e-13!39;UBERON:0001890!3.92e-13!39;UBERON:0006240!3.92e-13!39;UBERON:0000956!2.20e-11!21;UBERON:0001869!2.20e-11!21;UBERON:0000203!2.20e-11!21;UBERON:0002619!1.34e-09!17;UBERON:0002021!1.81e-08!10;UBERON:0000411!1.81e-08!10;UBERON:0001950!1.81e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.37e-33,73;UBERON:0000073,7.54e-33,54;UBERON:0001016,5.97e-32,75;UBERON:0004121,8.17e-31,95;UBERON:0000924,8.17e-31,95;UBERON:0006601,8.17e-31,95;UBERON:0001049,3.32e-30,52;UBERON:0005068,3.32e-30,52;UBERON:0006241,3.32e-30,52;UBERON:0007135,3.32e-30,52;UBERON:0002020,7.80e-30,34;UBERON:0010371,9.75e-30,73;UBERON:0002346,9.74e-29,64;UBERON:0003075,9.74e-29,64;UBERON:0007284,9.74e-29,64;UBERON:0000955,6.93e-27,47;UBERON:0006238,6.93e-27,47;UBERON:0003528,7.18e-27,29;UBERON:0002791,7.18e-27,29;UBERON:0001893,7.18e-27,29;UBERON:0002616,1.02e-25,46;UBERON:0003080,5.11e-23,40;UBERON:0002780,9.73e-22,39;UBERON:0001890,9.73e-22,39;UBERON:0006240,9.73e-22,39;UBERON:0003056,2.31e-20,49;UBERON:0000956,5.48e-18,21;UBERON:0001869,5.48e-18,21;UBERON:0000203,5.48e-18,21;UBERON:0010314,2.39e-17,92;UBERON:0002021,3.68e-16,10;UBERON:0000411,3.68e-16,10;UBERON:0001950,3.68e-16,10;UBERON:0002619,4.73e-16,17;UBERON:0002420,5.12e-10,8;UBERON:0007245,5.12e-10,8;UBERON:0010009,5.12e-10,8;UBERON:0010011,5.12e-10,8;UBERON:0000454,5.12e-10,8;UBERON:0000025,2.78e-09,114;UBERON:0004111,5.30e-08,122;UBERON:0003076,1.50e-07,12;UBERON:0003057,1.50e-07,12 | |||
|phase1_expression=0.160148847104794,0.697950815278722,0.454999239389536,0.30246421130683,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0,0,0,0,0,0,0,0.157731082679119,0,0,1.78590909317247,0,0,0,0,0,0,0.430942465371778,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,1.25896817975577,0.405507724878058,0.367093504323363,0,0.218025156380447,0.659058548203415,0.972149495371417,0.699932108126813,0,0.335565212115473,0,0.336093799142464,0.257259436035947,1.43266719969378,0,1.01158230429799,2.11596391708813,0.633831403506179,0.338844532069132,0,0.449949858640699,0,0,0.299600110518405,0.384218305321555,1.14058573539325,0.945041568321835,1.47227472945967,1.71390590642282,0.220868540951614,1.71487118900936,1.15014565221884,0,3.30347642998166,5.61824287574826,5.68344173048101,2.1101806036831,1.9212405156506,1.04182674111352,3.07101298901519,2.8138130501584,4.27835093775068,1.47314292736834,2.13557521198654,1.4911955666024,0.454357159999104,0.755715601067855,0.579728977403356,0,0,0,0,0.448026887097336,0.140444420131752,0.681721290312231,0.259786004602869,0,0.281686839553361,0,0,0,0.432982082022428,0,0.505524445014783,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0.125666591329675,0,0.86759614151947,0,0.323533699894818,0.220841518460394,0,0,1.17112318804619,2.09446706813455,0.255457055208591,0.11981512450592,0,0.127070227073065,6.74057877321702,4.11750542536764,1.88481528169297,7.99591872884472,7.67146371990992,4.98691306942944,4.86723789203273,0,0,0,2.31486041475121,0.130120442962704,0,0.180062129805349,0.452114453507145,0.476255494059295,0.512454881139399,0.562210347358373,3.3631438196072,0,0,0,0.43839146485515,0.556094498451196,0.696504333044333,1.02891068203972,0.199034266818493,0,0,0.284163499395593,0.414251545071004,0,0,0.473489471170421,0,0,0.465067889500816,0,0.233530684734339,0,0,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,6.72927835405207,4.21908910755066,0,0.264450566663544,0.213288250535234,0.464473343720877,0,0.403367049246685,0.444756087689741,0.380451252225118,0.474529061544512,0,0,0.397912944082302,0.58489226135736,0,0,0.398282546508734,0,0.114248512609729,0,0,0,0,0.126473074248515,0.147610147979602,0.31399745568275,0.493588655687202,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,0,0,0,0.369506380333209,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.390267295715598,0.315270288212382,0,0.318909537314974,0.655453258862952,0.690739927463582,0,0,0,0.491764273019036,0.275936746304732,3.85321415970701,3.28192722458169,0.163934945376675,0,0.315508219416257,1.56175497718655,1.29254038639679,0.477937595905104,1.33679204449436,0.566153061577665,0.404810701674894,0.876767573733936,1.58115111178609,3.21321316421807,0.283880170416537,0.534196811001766,0.162886959353576,0.824850614862677,0,0.242780636154981,0.604647113929502,0,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,1.05418608574999,0,0,0,0,0.857348140126369,0.354680467284547,0.356737635204141,0.164549020602121,0.304464949114599,0.23467170806371,0.847328283455281,0,2.14352128823924,0.484393280087717,1.08563264870681,2.02932984805332,2.1338316966858,0,3.52308073819968,0,0,0,0,0,0,0.169978429993855,0.279902904647316,0.276399947608848,0,0.158167996790568,0.406638934253697,0.324016022465404,0.418176592028937,0.87345025498471,0.674321731924103,0.495920734352016,0.785267825952089,0.259229946583586,0.621339313086926,0,0,0.165458490457098,0,0.258319646955462,0.337912250981556,0,0.2604087696879,0.629156066554265,0.241584120826006,0.288030006257865,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0.0962118416403295,0,0.226730383615211,0,0,0,0.386379188064381,1.12609485270709,0.36630324853453,0.428736758158132,0,10.1655331671072,10.5874804396651,7.44764167471216,10.3111909406213,7.53590771747707,8.3093328712867,8.77529250301348,6.75481804836331,8.15656336171568,5.69536342927002,0.103787347584177,0.399024873401031,0.170733605754134,0.243106717068294,0.419226325255965,1.10306105070008,0.44449345560323,1.44224540067226,0.64183841918363,2.27427490587418,1.01391719956096,0.754505365544305,0.655490552289177,0.89635213366817,0.402048282689293,1.90517476513229,0.695305955669133,0.77163688185482,2.06042950401653,0.441596760403192,1.02860775715625,0.70990322463735,0.476872379894642,0.726732083161643,0.564656282491984,0.930760686808441,0.548783918618318,0.263069711437843,0.543216455383447,0,0.949080144993393,1.37906275325789,0.409231043169689,0.929621047115796,0.192906610981141,1.49886346762768,0.233931608445408,0,0.382576664137687,0.441182838239031,0 | |||
|short_description=p4@Wdr47 | |||
}} |
Revision as of 01:14, 14 September 2013
Short description: | p4@Wdr47 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Wdr47_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 104bp_to_ENSMUST00000139626_5end |
EntrezGene: | Wdr47 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.66e-16 | 23 |
neuroblast (sensu Vertebrata) | 4.66e-16 | 23 |
neuron | 6.86e-15 | 33 |
neuronal stem cell | 6.86e-15 | 33 |
neuroblast | 6.86e-15 | 33 |
electrically signaling cell | 6.86e-15 | 33 |
electrically responsive cell | 4.24e-14 | 39 |
electrically active cell | 4.24e-14 | 39 |
neural cell | 5.43e-10 | 43 |
ectodermal cell | 1.25e-09 | 44 |
neurectodermal cell | 1.25e-09 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.