FFCP PHASE1:Mm9::chr5:31080472..31080494,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=65254|HGNC=|MCL_coexpression_id=22|UniProt=|association_with_transcript=-8bp_to_ENSMUST00000127365_5end|description=CAGE_peak_2_at_Dpysl5_5end|id=chr5:31080472..31080494,+|ontology_enrichment_celltype=CL:0000221!2.40e-25!44;CL:0000133!2.40e-25!44;CL:0002319!1.63e-24!43;CL:0000540!1.86e-23!33;CL:0000047!1.86e-23!33;CL:0000031!1.86e-23!33;CL:0000404!1.86e-23!33;CL:0000117!2.47e-21!23;CL:0000337!2.47e-21!23;CL:0000055!9.60e-20!50;CL:0000393!1.34e-18!39;CL:0000211!1.34e-18!39;CL:0002321!2.08e-13!70;CL:0000220!2.08e-13!70;CL:0002609!3.51e-10!6|ontology_enrichment_celltype_v019_2=CL:0000117,3.82e-43,23;CL:0000337,3.82e-43,23;CL:0002609,1.04e-31,6;CL:0000540,1.52e-29,33;CL:0000047,1.52e-29,33;CL:0000031,1.52e-29,33;CL:0000404,1.52e-29,33;CL:0002319,1.19e-25,43;CL:0000221,5.03e-25,44;CL:0000133,5.03e-25,44;CL:0000393,1.01e-24,39;CL:0000211,1.01e-24,39;CL:0002613,5.76e-17,3;CL:0000120,1.72e-16,3;CL:0002608,2.19e-16,3;CL:0002321,5.31e-15,70;CL:0000723,1.75e-09,91;CL:0000048,1.75e-09,91;CL:0000034,9.05e-09,97;CL:0002612,1.76e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!7.94e-29!73;UBERON:0005743!7.94e-29!73;UBERON:0000073!1.05e-27!75;UBERON:0001016!1.05e-27!75;UBERON:0004121!1.17e-23!102;UBERON:0000924!1.17e-23!102;UBERON:0006601!1.17e-23!102;UBERON:0002020!9.08e-21!34;UBERON:0002346!4.31e-20!71;UBERON:0003075!4.31e-20!71;UBERON:0007284!4.31e-20!71;UBERON:0001049!6.25e-20!52;UBERON:0005068!6.25e-20!52;UBERON:0006241!6.25e-20!52;UBERON:0007135!6.25e-20!52;UBERON:0003056!8.01e-18!49;UBERON:0000033!1.35e-17!63;UBERON:0003080!4.37e-17!40;UBERON:0002791!7.90e-17!29;UBERON:0003528!7.90e-17!29;UBERON:0001893!7.90e-17!29;UBERON:0002616!1.91e-16!49;UBERON:0002780!2.58e-16!39;UBERON:0001890!2.58e-16!39;UBERON:0006240!2.58e-16!39;UBERON:0000955!6.03e-16!50;UBERON:0006238!6.03e-16!50;UBERON:0000956!2.40e-11!21;UBERON:0001869!2.40e-11!21;UBERON:0000203!2.40e-11!21;UBERON:0007811!2.76e-10!86;UBERON:0000153!1.25e-08!94;UBERON:0002619!1.81e-08!17;UBERON:0001954!1.86e-07!7;UBERON:0003022!1.86e-07!7;UBERON:0002421!1.86e-07!7;UBERON:0000349!1.86e-07!7;UBERON:0002600!1.86e-07!7;UBERON:0002420!8.18e-07!8;UBERON:0007245!8.18e-07!8;UBERON:0010009!8.18e-07!8;UBERON:0010011!8.18e-07!8;UBERON:0000454!8.18e-07!8|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.84e-24,34;UBERON:0003528,1.23e-20,29;UBERON:0002791,1.23e-20,29;UBERON:0001893,1.23e-20,29;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0000369,3.35e-17,5;UBERON:0002435,3.35e-17,5;UBERON:0000204,3.35e-17,5;UBERON:0010082,3.35e-17,5;UBERON:0001049,2.92e-15,52;UBERON:0005068,2.92e-15,52;UBERON:0006241,2.92e-15,52;UBERON:0007135,2.92e-15,52;UBERON:0002780,5.77e-15,39;UBERON:0001890,5.77e-15,39;UBERON:0006240,5.77e-15,39;UBERON:0000073,1.25e-14,54;UBERON:0003080,1.49e-14,40;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002616,1.87e-12,46;UBERON:0001954,3.51e-12,7;UBERON:0003022,3.51e-12,7;UBERON:0002421,3.51e-12,7;UBERON:0000349,3.51e-12,7;UBERON:0002600,3.51e-12,7;UBERON:0000955,3.71e-12,47;UBERON:0006238,3.71e-12,47;UBERON:0002346,4.68e-12,64;UBERON:0003075,4.68e-12,64;UBERON:0007284,4.68e-12,64;UBERON:0000956,9.22e-12,21;UBERON:0001869,9.22e-12,21;UBERON:0000203,9.22e-12,21;UBERON:0003056,1.35e-11,49;UBERON:0002420,7.76e-11,8;UBERON:0007245,7.76e-11,8;UBERON:0010009,7.76e-11,8;UBERON:0010011,7.76e-11,8;UBERON:0000454,7.76e-11,8;UBERON:0010371,2.44e-10,73;UBERON:0010314,8.30e-08,92;UBERON:0002257,1.76e-07,3|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.61853168687678,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.76272340924412,4.99521971827255,2.3135745748652,0,0.662605622854841,1.22490799214954,2.49198224647415,1.83843757322004,0,0,0.153606533256243,2.1101806036831,2.8361169516747,2.08365348222704,0.279182999001381,0,0.916789486660861,1.17851434189467,0.711858403995515,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,1.00523481690292,0,0,0,0.162241263067758,0,0,0,0,0,0.229902104433473,0.360124259610698,0.30140963567143,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.54356918568927,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.876767573733936,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.56475184261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| ||
|EntrezGene=65254 | |||
|HGNC= | |||
|MCL_coexpression_id=22 | |||
|UniProt= | |||
|association_with_transcript=-8bp_to_ENSMUST00000127365_5end | |||
|description=CAGE_peak_2_at_Dpysl5_5end | |||
|id=chr5:31080472..31080494,+ | |||
|ontology_enrichment_celltype=CL:0000221!2.40e-25!44;CL:0000133!2.40e-25!44;CL:0002319!1.63e-24!43;CL:0000540!1.86e-23!33;CL:0000047!1.86e-23!33;CL:0000031!1.86e-23!33;CL:0000404!1.86e-23!33;CL:0000117!2.47e-21!23;CL:0000337!2.47e-21!23;CL:0000055!9.60e-20!50;CL:0000393!1.34e-18!39;CL:0000211!1.34e-18!39;CL:0002321!2.08e-13!70;CL:0000220!2.08e-13!70;CL:0002609!3.51e-10!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.82e-43,23;CL:0000337,3.82e-43,23;CL:0002609,1.04e-31,6;CL:0000540,1.52e-29,33;CL:0000047,1.52e-29,33;CL:0000031,1.52e-29,33;CL:0000404,1.52e-29,33;CL:0002319,1.19e-25,43;CL:0000221,5.03e-25,44;CL:0000133,5.03e-25,44;CL:0000393,1.01e-24,39;CL:0000211,1.01e-24,39;CL:0002613,5.76e-17,3;CL:0000120,1.72e-16,3;CL:0002608,2.19e-16,3;CL:0002321,5.31e-15,70;CL:0000723,1.75e-09,91;CL:0000048,1.75e-09,91;CL:0000034,9.05e-09,97;CL:0002612,1.76e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.94e-29!73;UBERON:0005743!7.94e-29!73;UBERON:0000073!1.05e-27!75;UBERON:0001016!1.05e-27!75;UBERON:0004121!1.17e-23!102;UBERON:0000924!1.17e-23!102;UBERON:0006601!1.17e-23!102;UBERON:0002020!9.08e-21!34;UBERON:0002346!4.31e-20!71;UBERON:0003075!4.31e-20!71;UBERON:0007284!4.31e-20!71;UBERON:0001049!6.25e-20!52;UBERON:0005068!6.25e-20!52;UBERON:0006241!6.25e-20!52;UBERON:0007135!6.25e-20!52;UBERON:0003056!8.01e-18!49;UBERON:0000033!1.35e-17!63;UBERON:0003080!4.37e-17!40;UBERON:0002791!7.90e-17!29;UBERON:0003528!7.90e-17!29;UBERON:0001893!7.90e-17!29;UBERON:0002616!1.91e-16!49;UBERON:0002780!2.58e-16!39;UBERON:0001890!2.58e-16!39;UBERON:0006240!2.58e-16!39;UBERON:0000955!6.03e-16!50;UBERON:0006238!6.03e-16!50;UBERON:0000956!2.40e-11!21;UBERON:0001869!2.40e-11!21;UBERON:0000203!2.40e-11!21;UBERON:0007811!2.76e-10!86;UBERON:0000153!1.25e-08!94;UBERON:0002619!1.81e-08!17;UBERON:0001954!1.86e-07!7;UBERON:0003022!1.86e-07!7;UBERON:0002421!1.86e-07!7;UBERON:0000349!1.86e-07!7;UBERON:0002600!1.86e-07!7;UBERON:0002420!8.18e-07!8;UBERON:0007245!8.18e-07!8;UBERON:0010009!8.18e-07!8;UBERON:0010011!8.18e-07!8;UBERON:0000454!8.18e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.84e-24,34;UBERON:0003528,1.23e-20,29;UBERON:0002791,1.23e-20,29;UBERON:0001893,1.23e-20,29;UBERON:0001017,1.01e-18,73;UBERON:0001016,3.61e-18,75;UBERON:0000369,3.35e-17,5;UBERON:0002435,3.35e-17,5;UBERON:0000204,3.35e-17,5;UBERON:0010082,3.35e-17,5;UBERON:0001049,2.92e-15,52;UBERON:0005068,2.92e-15,52;UBERON:0006241,2.92e-15,52;UBERON:0007135,2.92e-15,52;UBERON:0002780,5.77e-15,39;UBERON:0001890,5.77e-15,39;UBERON:0006240,5.77e-15,39;UBERON:0000073,1.25e-14,54;UBERON:0003080,1.49e-14,40;UBERON:0004121,6.62e-14,95;UBERON:0000924,6.62e-14,95;UBERON:0006601,6.62e-14,95;UBERON:0002616,1.87e-12,46;UBERON:0001954,3.51e-12,7;UBERON:0003022,3.51e-12,7;UBERON:0002421,3.51e-12,7;UBERON:0000349,3.51e-12,7;UBERON:0002600,3.51e-12,7;UBERON:0000955,3.71e-12,47;UBERON:0006238,3.71e-12,47;UBERON:0002346,4.68e-12,64;UBERON:0003075,4.68e-12,64;UBERON:0007284,4.68e-12,64;UBERON:0000956,9.22e-12,21;UBERON:0001869,9.22e-12,21;UBERON:0000203,9.22e-12,21;UBERON:0003056,1.35e-11,49;UBERON:0002420,7.76e-11,8;UBERON:0007245,7.76e-11,8;UBERON:0010009,7.76e-11,8;UBERON:0010011,7.76e-11,8;UBERON:0000454,7.76e-11,8;UBERON:0010371,2.44e-10,73;UBERON:0010314,8.30e-08,92;UBERON:0002257,1.76e-07,3 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0.872100625521786,0,0.194429899074283,0.139986421625363,1.43752564364972,0,0,0,0,0,0,1.61853168687678,1.5869729378161,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.76272340924412,4.99521971827255,2.3135745748652,0,0.662605622854841,1.22490799214954,2.49198224647415,1.83843757322004,0,0,0.153606533256243,2.1101806036831,2.8361169516747,2.08365348222704,0.279182999001381,0,0.916789486660861,1.17851434189467,0.711858403995515,1.1183966749518,0,0,0,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,1.00523481690292,0,0,0,0.162241263067758,0,0,0,0,0,0.229902104433473,0.360124259610698,0.30140963567143,0,0,0.187403449119458,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,1.54356918568927,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315508219416257,0,0.215423397732799,0,0.222798674082394,0,0,0.876767573733936,0.395287777946524,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18006109403131,0,0.214337035031592,0,0,0,0.608929898229199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.515559547031063,0,0,0,0.45032120322422,0,0.51776031175182,0.103787347584177,0,0.170733605754134,0,0,0.183843508450014,0,0,0,0,0,0,0.0936415074698824,0.384150914429216,0.114870937911227,0,0.115884325944855,0,0,0.294397840268795,0,0,0,0.145346416632329,0.0941093804153306,0,0,0,0.135804113845862,0,0.118635018124174,0,0.409231043169689,0.154936841185966,0,0.499621155875892,0,0,0,0,0.231867835620421 | |||
|short_description=p2@Dpysl5 | |||
}} |
Revision as of 07:23, 14 September 2013
Short description: | p2@Dpysl5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dpysl5_5end |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | -8bp_to_ENSMUST00000127365_5end |
EntrezGene: | Dpysl5 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.82e-43 | 23 |
neuroblast (sensu Vertebrata) | 3.82e-43 | 23 |
neuron of cerebral cortex | 1.04e-31 | 6 |
neuron | 1.52e-29 | 33 |
neuronal stem cell | 1.52e-29 | 33 |
neuroblast | 1.52e-29 | 33 |
electrically signaling cell | 1.52e-29 | 33 |
neural cell | 1.19e-25 | 43 |
ectodermal cell | 5.03e-25 | 44 |
neurectodermal cell | 5.03e-25 | 44 |
electrically responsive cell | 1.01e-24 | 39 |
electrically active cell | 1.01e-24 | 39 |
striatum neuron | 5.76e-17 | 3 |
granule cell | 1.72e-16 | 3 |
hippocampal neuron | 2.19e-16 | 3 |
embryonic cell | 5.31e-15 | 70 |
somatic stem cell | 1.75e-09 | 91 |
multi fate stem cell | 1.75e-09 | 91 |
stem cell | 9.05e-09 | 97 |
neuron of the ventral spinal cord | 1.76e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.