FFCP PHASE1:Hg19::chrX:33357642..33357657,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=1756|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding|HGNC=2928|TSSclassifier=S|UniProt=P11532,Q4G0X0,Q8N754|association_with_transcript=68bp_to_NM_000109,uc004ddb.1,uc004ddf.2_5end|coexpression_cluster_id=C1062|description=CAGE_peak_16_at_DMD_5end|id=chrX:33357642..33357657,-|ontology_enrichment_celltype=CL:0002150!1.53e-09!3;CL:0000861!1.53e-09!3|ontology_enrichment_celltype_v019=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_development_v019=|ontology_enrichment_disease=|ontology_enrichment_disease_v019=DOID:3371;5.06e-15;1!DOID:4549;5.06e-15;1!DOID:5861;5.06e-15;1!DOID:6496;5.06e-15;1|ontology_enrichment_disease_v019_2=DOID:3371,4.73e-15,1;DOID:4549,4.73e-15,1;DOID:5861,4.73e-15,1;DOID:6496,4.73e-15,1|ontology_enrichment_uberon=UBERON:0001049!1.90e-58!57;UBERON:0005068!1.90e-58!57;UBERON:0006241!1.90e-58!57;UBERON:0007135!1.90e-58!57;UBERON:0002616!2.59e-49!59;UBERON:0002780!7.94e-48!41;UBERON:0001890!7.94e-48!41;UBERON:0006240!7.94e-48!41;UBERON:0003080!1.52e-46!42;UBERON:0002020!1.21e-45!34;UBERON:0003528!1.21e-45!34;UBERON:0001893!4.06e-45!34;UBERON:0001869!2.79e-44!32;UBERON:0000955!3.39e-43!69;UBERON:0006238!3.39e-43!69;UBERON:0003075!5.20e-43!86;UBERON:0007284!5.20e-43!86;UBERON:0007023!8.99e-43!115;UBERON:0001017!1.35e-42!82;UBERON:0005743!1.35e-42!86;UBERON:0002791!1.96e-42!33;UBERON:0000073!2.95e-42!94;UBERON:0001016!2.95e-42!94;UBERON:0002346!1.09e-40!90;UBERON:0002619!3.10e-39!22;UBERON:0001950!3.24e-38!20;UBERON:0000956!3.62e-34!25;UBERON:0000203!3.62e-34!25;UBERON:0003056!1.84e-32!61;UBERON:0000033!7.83e-24!123;UBERON:0000153!2.55e-22!129;UBERON:0007811!2.55e-22!129;UBERON:0004121!1.09e-20!169;UBERON:0000200!2.23e-20!6;UBERON:0000924!5.44e-20!173;UBERON:0006601!5.44e-20!173;UBERON:0001871!2.34e-15!7;UBERON:0000025!5.87e-13!194;UBERON:0002420!9.28e-13!9;UBERON:0007245!9.28e-13!9;UBERON:0010009!9.28e-13!9;UBERON:0010011!9.28e-13!9;UBERON:0000454!9.28e-13!9;UBERON:0003076!9.64e-13!15;UBERON:0003057!9.64e-13!15;UBERON:0002308!1.01e-12!9;UBERON:0000125!1.01e-12!9;UBERON:0002771!1.66e-11!3;UBERON:0000349!2.52e-11!5;UBERON:0001872!3.54e-11!5;UBERON:0004111!1.64e-09!241;UBERON:0004733!2.47e-09!12;UBERON:0002028!2.47e-09!12;UBERON:0007277!2.47e-09!12;UBERON:0000064!1.10e-08!219;UBERON:0004732!1.47e-08!13;UBERON:0001905!3.85e-08!2;UBERON:0002757!3.85e-08!2;UBERON:0010134!3.85e-08!2;UBERON:0002784!3.85e-08!2;UBERON:0005408!3.85e-08!2;UBERON:0001899!3.85e-08!2;UBERON:0001876!5.23e-08!2;UBERON:0001870!5.78e-08!2;UBERON:0002148!5.98e-08!2;UBERON:0009662!5.98e-08!2;UBERON:0000369!6.59e-08!4;UBERON:0002435!6.59e-08!4;UBERON:0000204!6.59e-08!4;UBERON:0010082!6.59e-08!4;UBERON:0009663!1.48e-07!7;UBERON:0000477!2.50e-07!286;UBERON:0000475!2.53e-07!365;UBERON:0000062!8.56e-07!511|ontology_enrichment_uberon_v019=UBERON:0002619;3.07e-56;22!UBERON:0001950;4.49e-50;20!UBERON:0000956;1.18e-49;25!UBERON:0000203;1.18e-49;25!UBERON:0003528;1.02e-35;34!UBERON:0002020;1.02e-35;34!UBERON:0002791;6.63e-35;32!UBERON:0001869;1.82e-33;32!UBERON:0001893;1.40e-31;34!UBERON:0002780;6.69e-31;41!UBERON:0001890;6.69e-31;41!UBERON:0002771;9.31e-28;2!UBERON:0001905;1.40e-27;2!UBERON:0002757;1.40e-27;2!UBERON:0010134;1.40e-27;2!UBERON:0005408;1.40e-27;2!UBERON:0001899;1.40e-27;2!UBERON:0000073;7.00e-21;53!UBERON:0002616;7.00e-21;53!UBERON:0000200;9.52e-21;6!UBERON:0001870;8.30e-19;3!UBERON:0001871;8.07e-18;6!UBERON:0003112;2.25e-14;1!UBERON:0011158;2.25e-14;1!UBERON:0003128;2.25e-14;1!UBERON:0001703;2.25e-14;1!UBERON:0002241;2.25e-14;1!UBERON:0003296;2.58e-14;4!UBERON:0010133;2.58e-14;4!UBERON:0002784;2.58e-14;4!UBERON:0001872;1.35e-11;5!UBERON:0002021;1.67e-11;5!UBERON:0000349;1.67e-11;5!UBERON:0000955;6.58e-10;68!UBERON:0001017;1.04e-08;75!UBERON:0001894;1.42e-08;7!UBERON:0002702;4.68e-08;2!UBERON:0001876;5.55e-08;2!UBERON:0001954;7.78e-08;2!UBERON:0002148;7.78e-08;2!UBERON:0006331;7.78e-08;2!UBERON:0009662;7.78e-08;2!UBERON:0003022;7.78e-08;2!UBERON:0002421;7.78e-08;2!UBERON:0002600;7.78e-08;2!UBERON:0007023;7.90e-08;114|ontology_enrichment_uberon_v019_2=UBERON:0002619,3.36e-56,22;UBERON:0001950,5.34e-50,20;UBERON:0000956,1.28e-49,25;UBERON:0000203,1.28e-49,25;UBERON:0003528,2.62e-44,34;UBERON:0002020,2.62e-44,34;UBERON:0002780,6.69e-44,41;UBERON:0001890,6.69e-44,41;UBERON:0003080,6.69e-44,41;UBERON:0006240,6.69e-44,41;UBERON:0000073,7.66e-40,53;UBERON:0002616,7.66e-40,53;UBERON:0002791,6.58e-39,32;UBERON:0001869,6.58e-39,32;UBERON:0001049,1.11e-37,56;UBERON:0005068,1.11e-37,56;UBERON:0006241,1.11e-37,56;UBERON:0007135,1.11e-37,56;UBERON:0001893,1.24e-36,34;UBERON:0000955,1.90e-30,68;UBERON:0006238,1.90e-30,68;UBERON:0003056,2.32e-29,61;UBERON:0002771,8.13e-28,2;UBERON:0001905,1.83e-27,2;UBERON:0002757,1.83e-27,2;UBERON:0010134,1.83e-27,2;UBERON:0005408,1.83e-27,2;UBERON:0001899,1.83e-27,2;UBERON:0001017,1.79e-25,81;UBERON:0003075,1.79e-25,82;UBERON:0007284,1.79e-25,82;UBERON:0002346,3.07e-24,86;UBERON:0001016,7.54e-23,89;UBERON:0000200,8.91e-21,6;UBERON:00103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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=1756 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2928 | |||
|TSSclassifier=S | |||
|UniProt=P11532,Q4G0X0,Q8N754 | |||
|association_with_transcript=68bp_to_NM_000109,uc004ddb.1,uc004ddf.2_5end | |||
|coexpression_cluster_id=C1062 | |||
|description=CAGE_peak_16_at_DMD_5end | |||
|id=chrX:33357642..33357657,- | |||
|ontology_enrichment_celltype=CL:0002150!1.53e-09!3;CL:0000861!1.53e-09!3 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3371;5.06e-15;1!DOID:4549;5.06e-15;1!DOID:5861;5.06e-15;1!DOID:6496;5.06e-15;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,4.73e-15,1;DOID:4549,4.73e-15,1;DOID:5861,4.73e-15,1;DOID:6496,4.73e-15,1 | |||
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|short_description=p16@DMD | |||
}} |
Revision as of 11:46, 14 September 2013
Short description: | p16@DMD |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_16_at_DMD_5end |
Coexpression cluster: | C1062_extraskeletal_pineal_amygdala_middle_medial_parietal_hippocampus |
Association with transcript: | 68bp_to_NM_000109, uc004ddb.1, uc004ddf.2_5end |
EntrezGene: | DMD |
HGNC: | 2928 |
UniProt: | P11532Q4G0X0Q8N754 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 4.73e-15 | 1 |
extraosseous chondrosarcoma | 4.73e-15 | 1 |
myxoid chondrosarcoma | 4.73e-15 | 1 |
extraskeletal myxoid chondrosarcoma | 4.73e-15 | 1 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.