FFCP PHASE1:Mm9::chr8:124254487..124254489,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=57340|HGNC=|MCL_coexpression_id=1|UniProt=Q9ET77|association_with_transcript=20bp_to_ENSMUST00000167439_5end|description=CAGE_peak_2_at_Jph3_5end|id=chr8:124254487..124254489,+|ontology_enrichment_celltype=CL:0000117!2.06e-15!23;CL:0000337!2.06e-15!23;CL:0000540!3.48e-15!33;CL:0000047!3.48e-15!33;CL:0000031!3.48e-15!33;CL:0000404!3.48e-15!33;CL:0000221!7.70e-12!44;CL:0000133!7.70e-12!44;CL:0002319!9.35e-12!43;CL:0000393!9.66e-11!39;CL:0000211!9.66e-11!39;CL:0000055!3.41e-08!50|ontology_enrichment_celltype_v019_2=CL:0000117,9.10e-21,23;CL:0000337,9.10e-21,23;CL:0000540,2.93e-19,33;CL:0000047,2.93e-19,33;CL:0000031,2.93e-19,33;CL:0000404,2.93e-19,33;CL:0000393,9.19e-15,39;CL:0000211,9.19e-15,39;CL:0002319,1.00e-14,43;CL:0000221,3.71e-14,44;CL:0000133,3.71e-14,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!7.18e-32!75;UBERON:0001016!7.18e-32!75;UBERON:0001017!1.08e-31!73;UBERON:0005743!1.08e-31!73;UBERON:0002346!7.12e-29!71;UBERON:0003075!7.12e-29!71;UBERON:0007284!7.12e-29!71;UBERON:0004121!3.26e-28!102;UBERON:0000924!3.26e-28!102;UBERON:0006601!3.26e-28!102;UBERON:0001049!1.64e-26!52;UBERON:0005068!1.64e-26!52;UBERON:0006241!1.64e-26!52;UBERON:0007135!1.64e-26!52;UBERON:0000955!2.76e-25!50;UBERON:0006238!2.76e-25!50;UBERON:0000033!1.30e-24!63;UBERON:0002616!1.42e-24!49;UBERON:0003056!7.32e-22!49;UBERON:0003080!3.17e-21!40;UBERON:0002020!1.14e-20!34;UBERON:0002780!1.49e-20!39;UBERON:0001890!1.49e-20!39;UBERON:0006240!1.49e-20!39;UBERON:0002791!2.79e-17!29;UBERON:0003528!2.79e-17!29;UBERON:0001893!2.79e-17!29;UBERON:0007811!5.64e-12!86;UBERON:0000956!6.67e-12!21;UBERON:0001869!6.67e-12!21;UBERON:0000203!6.67e-12!21;UBERON:0000153!2.72e-10!94;UBERON:0002619!1.33e-09!17;UBERON:0002021!3.90e-09!10;UBERON:0000411!3.90e-09!10;UBERON:0001950!3.90e-09!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.19e-41,73;UBERON:0001016,1.47e-39,75;UBERON:0000073,6.90e-37,54;UBERON:0001049,1.43e-34,52;UBERON:0005068,1.43e-34,52;UBERON:0006241,1.43e-34,52;UBERON:0007135,1.43e-34,52;UBERON:0002346,4.29e-34,64;UBERON:0003075,4.29e-34,64;UBERON:0007284,4.29e-34,64;UBERON:0004121,1.70e-32,95;UBERON:0000924,1.70e-32,95;UBERON:0006601,1.70e-32,95;UBERON:0000955,1.06e-29,47;UBERON:0006238,1.06e-29,47;UBERON:0002020,8.56e-29,34;UBERON:0002616,9.60e-29,46;UBERON:0010371,1.31e-27,73;UBERON:0003080,1.39e-26,40;UBERON:0002780,1.15e-25,39;UBERON:0001890,1.15e-25,39;UBERON:0006240,1.15e-25,39;UBERON:0003056,1.28e-25,49;UBERON:0003528,4.60e-24,29;UBERON:0002791,4.60e-24,29;UBERON:0001893,4.60e-24,29;UBERON:0010314,5.58e-20,92;UBERON:0000956,1.47e-16,21;UBERON:0001869,1.47e-16,21;UBERON:0000203,1.47e-16,21;UBERON:0002619,2.32e-13,17;UBERON:0002021,4.62e-12,10;UBERON:0000411,4.62e-12,10;UBERON:0001950,4.62e-12,10;UBERON:0002420,1.21e-08,8;UBERON:0007245,1.21e-08,8;UBERON:0010009,1.21e-08,8;UBERON:0010011,1.21e-08,8;UBERON:0000454,1.21e-08,8;UBERON:0003076,3.50e-08,12;UBERON:0003057,3.50e-08,12;UBERON:0000025,1.68e-07,114|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7691016427506,16.398720357433,20.2826049121977,0,0,0,0,0,2.39680088414724,1.92109152660777,4.45865332926454,10.1254453748768,9.46462326081219,19.1386159550548,24.0746709637259,8.08439274818697,6.3258010872036,11.0306254393203,30.8324466798288,23.3667828695894,21.9657342556428,13.7161739239402,13.3571959659518,14.0646610050325,25.684835908127,33.2029939918691,22.4613424231911,22.6864010814724,20.9286370774681,16.0303523409758,0.37863096666592,0.529000920747499,0,0,0,0,0,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0.890652834388949,1.04091196059682,2.13125834818499,0.691846491768175,0.753613202763113,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,23.1296829639122,31.2075593152048,0,0,0,0,20.2217363196511,37.0575488283087,18.9738071690425,27.638066910572,35.5444485689159,23.0644729461112,22.8760180925538,0,0,0,0.420883711772948,0,0.229902104433473,0.180062129805349,1.35634336052144,1.15662048557257,1.5373646434182,1.96773621575431,2.84573707812917,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4920425417985,12.5543627102727,0,0.264450566663544,0.426576501070468,0.696710015581316,0.644337306610467,0.201683524623343,0.22237804384487,0.190225626112559,1.89811624617805,0.658795818896044,0.754005626400808,0.994782360205754,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2431390881566,19.8087750340823,0,0,1.26203287766503,0,2.36965737506079,0,1.11399337041197,0.283076530788832,1.61924280669958,1.46127928955656,2.37172666767914,20.8858855674175,0,0.35613120733451,0,0,0,0.728341908464944,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,1.70219802876894,0.36012218806262,0.776152102696527,1.28602221018955,0.177340233642274,1.78368817602071,3.45552943264454,3.65357938937519,0,0,0,0,0,0,0,0,1.1659233465194,19.655082013114,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0,0.627264888043406,0,0.404593039154462,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.777804753376191,0.645799117388655,0.506868376472335,0.117357238645754,0.2604087696879,0.838874755405687,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,24.2843292325339,27.6195141904306,22.3429250241365,26.1216837162405,26.0331357512844,51.3667850224996,36.4512150125175,32.4231266321439,36.7045351277206,41.4208249401456,1.03787347584177,1.19707462020309,1.87806966329548,0.729320151204882,1.67690530102386,1.83843508450014,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,0.760437899670719,1.69763707247469,1.87283014939765,1.15245274328765,1.20614484806788,1.42888107384922,0.927074607558844,1.73618298417335,2.47251540481984,1.17759136107518,0.342869252385415,1.59728225543404,1.43061713968393,2.18019624948493,1.41164070622996,2.19997980518359,2.56099162021882,1.31534855718921,1.62964936615034,2.24456908663095,1.54225523561426,0.985044823755635,0.409231043169689,1.85924209423159,2.89359916471712,2.74791635731741,1.87145286756327,1.28922632428979,0.765153328275374,1.32354851471709,0.463735671240843|short_description=p2@Jph3}} | ||
|EntrezGene=57340 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=Q9ET77 | |||
|association_with_transcript=20bp_to_ENSMUST00000167439_5end | |||
|description=CAGE_peak_2_at_Jph3_5end | |||
|id=chr8:124254487..124254489,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.06e-15!23;CL:0000337!2.06e-15!23;CL:0000540!3.48e-15!33;CL:0000047!3.48e-15!33;CL:0000031!3.48e-15!33;CL:0000404!3.48e-15!33;CL:0000221!7.70e-12!44;CL:0000133!7.70e-12!44;CL:0002319!9.35e-12!43;CL:0000393!9.66e-11!39;CL:0000211!9.66e-11!39;CL:0000055!3.41e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,9.10e-21,23;CL:0000337,9.10e-21,23;CL:0000540,2.93e-19,33;CL:0000047,2.93e-19,33;CL:0000031,2.93e-19,33;CL:0000404,2.93e-19,33;CL:0000393,9.19e-15,39;CL:0000211,9.19e-15,39;CL:0002319,1.00e-14,43;CL:0000221,3.71e-14,44;CL:0000133,3.71e-14,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!7.18e-32!75;UBERON:0001016!7.18e-32!75;UBERON:0001017!1.08e-31!73;UBERON:0005743!1.08e-31!73;UBERON:0002346!7.12e-29!71;UBERON:0003075!7.12e-29!71;UBERON:0007284!7.12e-29!71;UBERON:0004121!3.26e-28!102;UBERON:0000924!3.26e-28!102;UBERON:0006601!3.26e-28!102;UBERON:0001049!1.64e-26!52;UBERON:0005068!1.64e-26!52;UBERON:0006241!1.64e-26!52;UBERON:0007135!1.64e-26!52;UBERON:0000955!2.76e-25!50;UBERON:0006238!2.76e-25!50;UBERON:0000033!1.30e-24!63;UBERON:0002616!1.42e-24!49;UBERON:0003056!7.32e-22!49;UBERON:0003080!3.17e-21!40;UBERON:0002020!1.14e-20!34;UBERON:0002780!1.49e-20!39;UBERON:0001890!1.49e-20!39;UBERON:0006240!1.49e-20!39;UBERON:0002791!2.79e-17!29;UBERON:0003528!2.79e-17!29;UBERON:0001893!2.79e-17!29;UBERON:0007811!5.64e-12!86;UBERON:0000956!6.67e-12!21;UBERON:0001869!6.67e-12!21;UBERON:0000203!6.67e-12!21;UBERON:0000153!2.72e-10!94;UBERON:0002619!1.33e-09!17;UBERON:0002021!3.90e-09!10;UBERON:0000411!3.90e-09!10;UBERON:0001950!3.90e-09!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.19e-41,73;UBERON:0001016,1.47e-39,75;UBERON:0000073,6.90e-37,54;UBERON:0001049,1.43e-34,52;UBERON:0005068,1.43e-34,52;UBERON:0006241,1.43e-34,52;UBERON:0007135,1.43e-34,52;UBERON:0002346,4.29e-34,64;UBERON:0003075,4.29e-34,64;UBERON:0007284,4.29e-34,64;UBERON:0004121,1.70e-32,95;UBERON:0000924,1.70e-32,95;UBERON:0006601,1.70e-32,95;UBERON:0000955,1.06e-29,47;UBERON:0006238,1.06e-29,47;UBERON:0002020,8.56e-29,34;UBERON:0002616,9.60e-29,46;UBERON:0010371,1.31e-27,73;UBERON:0003080,1.39e-26,40;UBERON:0002780,1.15e-25,39;UBERON:0001890,1.15e-25,39;UBERON:0006240,1.15e-25,39;UBERON:0003056,1.28e-25,49;UBERON:0003528,4.60e-24,29;UBERON:0002791,4.60e-24,29;UBERON:0001893,4.60e-24,29;UBERON:0010314,5.58e-20,92;UBERON:0000956,1.47e-16,21;UBERON:0001869,1.47e-16,21;UBERON:0000203,1.47e-16,21;UBERON:0002619,2.32e-13,17;UBERON:0002021,4.62e-12,10;UBERON:0000411,4.62e-12,10;UBERON:0001950,4.62e-12,10;UBERON:0002420,1.21e-08,8;UBERON:0007245,1.21e-08,8;UBERON:0010009,1.21e-08,8;UBERON:0010011,1.21e-08,8;UBERON:0000454,1.21e-08,8;UBERON:0003076,3.50e-08,12;UBERON:0003057,3.50e-08,12;UBERON:0000025,1.68e-07,114 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.90902598404949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.7691016427506,16.398720357433,20.2826049121977,0,0,0,0,0,2.39680088414724,1.92109152660777,4.45865332926454,10.1254453748768,9.46462326081219,19.1386159550548,24.0746709637259,8.08439274818697,6.3258010872036,11.0306254393203,30.8324466798288,23.3667828695894,21.9657342556428,13.7161739239402,13.3571959659518,14.0646610050325,25.684835908127,33.2029939918691,22.4613424231911,22.6864010814724,20.9286370774681,16.0303523409758,0.37863096666592,0.529000920747499,0,0,0,0,0,0,1.68533304158102,0,0,0,0.422530259330042,0,0,0,0,0,0,0.68510327831436,0,0.890652834388949,1.04091196059682,2.13125834818499,0.691846491768175,0.753613202763113,0.823120949949934,0.125666591329675,0,0,0,0,0,0,0,23.1296829639122,31.2075593152048,0,0,0,0,20.2217363196511,37.0575488283087,18.9738071690425,27.638066910572,35.5444485689159,23.0644729461112,22.8760180925538,0,0,0,0.420883711772948,0,0.229902104433473,0.180062129805349,1.35634336052144,1.15662048557257,1.5373646434182,1.96773621575431,2.84573707812917,0.215567992932842,0,0.175951124163949,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,30.4920425417985,12.5543627102727,0,0.264450566663544,0.426576501070468,0.696710015581316,0.644337306610467,0.201683524623343,0.22237804384487,0.190225626112559,1.89811624617805,0.658795818896044,0.754005626400808,0.994782360205754,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.2431390881566,19.8087750340823,0,0,1.26203287766503,0,2.36965737506079,0,1.11399337041197,0.283076530788832,1.61924280669958,1.46127928955656,2.37172666767914,20.8858855674175,0,0.35613120733451,0,0,0,0.728341908464944,0.302323556964751,0.377210159511796,0,0.307435147943927,0.258428293168221,0,0,0.316036757935816,0,0,1.70219802876894,0.36012218806262,0.776152102696527,1.28602221018955,0.177340233642274,1.78368817602071,3.45552943264454,3.65357938937519,0,0,0,0,0,0,0,0,1.1659233465194,19.655082013114,0,0,0,0,0,0,0,0,0,0,0.474503990371703,0.406638934253697,0,0.627264888043406,0,0.404593039154462,0.661227645802687,0.26175594198403,0.259229946583586,0,0,0.149516546043979,0.330916980914195,0.777804753376191,0.645799117388655,0.506868376472335,0.117357238645754,0.2604087696879,0.838874755405687,0.483168241652012,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0.221985953374065,0.0897138566094757,0,0,0,0,0,0,24.2843292325339,27.6195141904306,22.3429250241365,26.1216837162405,26.0331357512844,51.3667850224996,36.4512150125175,32.4231266321439,36.7045351277206,41.4208249401456,1.03787347584177,1.19707462020309,1.87806966329548,0.729320151204882,1.67690530102386,1.83843508450014,0.888986911206461,0.824140228955577,0.320919209591815,0.758091635291392,0.760437899670719,1.69763707247469,1.87283014939765,1.15245274328765,1.20614484806788,1.42888107384922,0.927074607558844,1.73618298417335,2.47251540481984,1.17759136107518,0.342869252385415,1.59728225543404,1.43061713968393,2.18019624948493,1.41164070622996,2.19997980518359,2.56099162021882,1.31534855718921,1.62964936615034,2.24456908663095,1.54225523561426,0.985044823755635,0.409231043169689,1.85924209423159,2.89359916471712,2.74791635731741,1.87145286756327,1.28922632428979,0.765153328275374,1.32354851471709,0.463735671240843 | |||
|short_description=p2@Jph3 | |||
}} |
Revision as of 14:59, 14 September 2013
Short description: | p2@Jph3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Jph3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 20bp_to_ENSMUST00000167439_5end |
EntrezGene: | Jph3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 9.10e-21 | 23 |
neuroblast (sensu Vertebrata) | 9.10e-21 | 23 |
neuron | 2.93e-19 | 33 |
neuronal stem cell | 2.93e-19 | 33 |
neuroblast | 2.93e-19 | 33 |
electrically signaling cell | 2.93e-19 | 33 |
electrically responsive cell | 9.19e-15 | 39 |
electrically active cell | 9.19e-15 | 39 |
neural cell | 1.00e-14 | 43 |
ectodermal cell | 3.71e-14 | 44 |
neurectodermal cell | 3.71e-14 | 44 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.