FFCP PHASE1:Mm9::chr9:26541430..26541441,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=76898|HGNC=|MCL_coexpression_id=1|UniProt=E9QKU7,Q8R531|association_with_transcript=0bp_to_ENSMUST00000067362,ENSMUST00000115269_5end|description=CAGE_peak_3_at_B3gat1_5end|id=chr9:26541430..26541441,+|ontology_enrichment_celltype=CL:0000117!2.92e-19!23;CL:0000337!2.92e-19!23;CL:0000540!2.28e-12!33;CL:0000047!2.28e-12!33;CL:0000031!2.28e-12!33;CL:0000404!2.28e-12!33;CL:0000221!3.04e-10!44;CL:0000133!3.04e-10!44;CL:0002319!1.00e-09!43;CL:0000393!2.18e-09!39;CL:0000211!2.18e-09!39;CL:0000055!2.27e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-28,23;CL:0000337,1.62e-28,23;CL:0000540,5.81e-19,33;CL:0000047,5.81e-19,33;CL:0000031,5.81e-19,33;CL:0000404,5.81e-19,33;CL:0000393,1.40e-15,39;CL:0000211,1.40e-15,39;CL:0002319,7.53e-14,43;CL:0000221,1.82e-13,44;CL:0000133,1.82e-13,44;CL:0002614,5.25e-11,3;CL:0002612,2.71e-10,3;CL:0000120,9.22e-10,3;CL:0002611,1.57e-07,2;CL:0002321,2.34e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!7.62e-29!52;UBERON:0005068!7.62e-29!52;UBERON:0006241!7.62e-29!52;UBERON:0007135!7.62e-29!52;UBERON:0001017!1.77e-27!73;UBERON:0005743!1.77e-27!73;UBERON:0000073!2.62e-26!75;UBERON:0001016!2.62e-26!75;UBERON:0000033!5.03e-26!63;UBERON:0002346!5.00e-25!71;UBERON:0003075!5.00e-25!71;UBERON:0007284!5.00e-25!71;UBERON:0000955!1.64e-24!50;UBERON:0006238!1.64e-24!50;UBERON:0002616!1.33e-23!49;UBERON:0004121!2.91e-23!102;UBERON:0000924!2.91e-23!102;UBERON:0006601!2.91e-23!102;UBERON:0002020!7.04e-23!34;UBERON:0003056!2.05e-22!49;UBERON:0003080!9.48e-20!40;UBERON:0002780!1.11e-18!39;UBERON:0001890!1.11e-18!39;UBERON:0006240!1.11e-18!39;UBERON:0002791!2.01e-17!29;UBERON:0003528!2.01e-17!29;UBERON:0001893!2.01e-17!29;UBERON:0007811!3.44e-15!86;UBERON:0000153!9.95e-13!94;UBERON:0000956!5.41e-10!21;UBERON:0001869!5.41e-10!21;UBERON:0000203!5.41e-10!21;UBERON:0003076!1.21e-09!12;UBERON:0003057!1.21e-09!12;UBERON:0002420!2.33e-09!8;UBERON:0007245!2.33e-09!8;UBERON:0010009!2.33e-09!8;UBERON:0010011!2.33e-09!8;UBERON:0000454!2.33e-09!8;UBERON:0002298!9.90e-09!6;UBERON:0002240!3.14e-08!6;UBERON:0005174!3.14e-08!6;UBERON:0001137!3.14e-08!6;UBERON:0001948!4.91e-07!5;UBERON:0002315!4.91e-07!5;UBERON:0002619!5.73e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.33e-28,73;UBERON:0000073,1.14e-27,54;UBERON:0001016,4.67e-27,75;UBERON:0001049,3.06e-26,52;UBERON:0005068,3.06e-26,52;UBERON:0006241,3.06e-26,52;UBERON:0007135,3.06e-26,52;UBERON:0002020,4.02e-21,34;UBERON:0003076,4.37e-21,12;UBERON:0003057,4.37e-21,12;UBERON:0002346,1.61e-20,64;UBERON:0003075,1.61e-20,64;UBERON:0007284,1.61e-20,64;UBERON:0004121,2.22e-20,95;UBERON:0000924,2.22e-20,95;UBERON:0006601,2.22e-20,95;UBERON:0002240,2.29e-19,6;UBERON:0005174,2.29e-19,6;UBERON:0001137,2.29e-19,6;UBERON:0010371,1.85e-17,73;UBERON:0001948,3.45e-16,5;UBERON:0002315,3.45e-16,5;UBERON:0002616,7.16e-15,46;UBERON:0000955,1.74e-14,47;UBERON:0006238,1.74e-14,47;UBERON:0002950,4.78e-14,4;UBERON:0001891,4.78e-14,4;UBERON:0009616,4.78e-14,4;UBERON:0010286,4.78e-14,4;UBERON:0010314,5.87e-13,92;UBERON:0003528,2.06e-11,29;UBERON:0002791,2.06e-11,29;UBERON:0001893,2.06e-11,29;UBERON:0003080,4.71e-11,40;UBERON:0002038,5.25e-11,3;UBERON:0009663,5.25e-11,3;UBERON:0009661,5.25e-11,3;UBERON:0000125,5.25e-11,3;UBERON:0002308,5.25e-11,3;UBERON:0002257,2.71e-10,3;UBERON:0002420,5.48e-10,8;UBERON:0007245,5.48e-10,8;UBERON:0010009,5.48e-10,8;UBERON:0010011,5.48e-10,8;UBERON:0000454,5.48e-10,8;UBERON:0000025,1.30e-09,114;UBERON:0002780,1.52e-09,39;UBERON:0001890,1.52e-09,39;UBERON:0006240,1.52e-09,39;UBERON:0004111,1.08e-08,122;UBERON:0003056,1.46e-08,49;UBERON:0001896,2.68e-08,2;UBERON:0002298,2.68e-08,2;UBERON:0005290,2.68e-08,2;UBERON:0010096,2.68e-08,2;UBERON:0002256,1.57e-07,2;UBERON:0011216,1.74e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.540023753326763,0.420649922702764,1.42825492201902,1.98781686856452,0.122490799214954,0.0958454710182364,0,0,1.40456071893706,2.30409799884365,1.18697658957174,0.914876436024097,1.04182674111352,2.51264699101243,2.8138130501584,1.5279824777681,1.76777151284201,1.13897344639282,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,1.79748767285787,0.457500602818626,0.502617408451458,1.39059456153821,1.79000820131231,1.24672826735736,0.973447578406546,0,0,0,0,0,0,0.540186389416048,0.150704817835715,0.612328492361951,0.512454881139399,0.562210347358373,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,3.28192722458169,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.356737635204141,0.329098041204242,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,2.41052892613663,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.14579102687879,1.54667864109319,0,0.755393897389701,2.70009000092722,0.45032120322422,1.35942722695261,0,0.207574695168353,0,0,0.486213434136588,0,0.551530525350042,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0,0.187283014939765,0.384150914429216,0.287177344778066,0.476293691283074,0,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0,0.249810577937946,0,0,0.382576664137687,0,0|short_description=p3@B3gat1}} | ||
|EntrezGene=76898 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|UniProt=E9QKU7,Q8R531 | |||
|association_with_transcript=0bp_to_ENSMUST00000067362,ENSMUST00000115269_5end | |||
|description=CAGE_peak_3_at_B3gat1_5end | |||
|id=chr9:26541430..26541441,+ | |||
|ontology_enrichment_celltype=CL:0000117!2.92e-19!23;CL:0000337!2.92e-19!23;CL:0000540!2.28e-12!33;CL:0000047!2.28e-12!33;CL:0000031!2.28e-12!33;CL:0000404!2.28e-12!33;CL:0000221!3.04e-10!44;CL:0000133!3.04e-10!44;CL:0002319!1.00e-09!43;CL:0000393!2.18e-09!39;CL:0000211!2.18e-09!39;CL:0000055!2.27e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.62e-28,23;CL:0000337,1.62e-28,23;CL:0000540,5.81e-19,33;CL:0000047,5.81e-19,33;CL:0000031,5.81e-19,33;CL:0000404,5.81e-19,33;CL:0000393,1.40e-15,39;CL:0000211,1.40e-15,39;CL:0002319,7.53e-14,43;CL:0000221,1.82e-13,44;CL:0000133,1.82e-13,44;CL:0002614,5.25e-11,3;CL:0002612,2.71e-10,3;CL:0000120,9.22e-10,3;CL:0002611,1.57e-07,2;CL:0002321,2.34e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.62e-29!52;UBERON:0005068!7.62e-29!52;UBERON:0006241!7.62e-29!52;UBERON:0007135!7.62e-29!52;UBERON:0001017!1.77e-27!73;UBERON:0005743!1.77e-27!73;UBERON:0000073!2.62e-26!75;UBERON:0001016!2.62e-26!75;UBERON:0000033!5.03e-26!63;UBERON:0002346!5.00e-25!71;UBERON:0003075!5.00e-25!71;UBERON:0007284!5.00e-25!71;UBERON:0000955!1.64e-24!50;UBERON:0006238!1.64e-24!50;UBERON:0002616!1.33e-23!49;UBERON:0004121!2.91e-23!102;UBERON:0000924!2.91e-23!102;UBERON:0006601!2.91e-23!102;UBERON:0002020!7.04e-23!34;UBERON:0003056!2.05e-22!49;UBERON:0003080!9.48e-20!40;UBERON:0002780!1.11e-18!39;UBERON:0001890!1.11e-18!39;UBERON:0006240!1.11e-18!39;UBERON:0002791!2.01e-17!29;UBERON:0003528!2.01e-17!29;UBERON:0001893!2.01e-17!29;UBERON:0007811!3.44e-15!86;UBERON:0000153!9.95e-13!94;UBERON:0000956!5.41e-10!21;UBERON:0001869!5.41e-10!21;UBERON:0000203!5.41e-10!21;UBERON:0003076!1.21e-09!12;UBERON:0003057!1.21e-09!12;UBERON:0002420!2.33e-09!8;UBERON:0007245!2.33e-09!8;UBERON:0010009!2.33e-09!8;UBERON:0010011!2.33e-09!8;UBERON:0000454!2.33e-09!8;UBERON:0002298!9.90e-09!6;UBERON:0002240!3.14e-08!6;UBERON:0005174!3.14e-08!6;UBERON:0001137!3.14e-08!6;UBERON:0001948!4.91e-07!5;UBERON:0002315!4.91e-07!5;UBERON:0002619!5.73e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.33e-28,73;UBERON:0000073,1.14e-27,54;UBERON:0001016,4.67e-27,75;UBERON:0001049,3.06e-26,52;UBERON:0005068,3.06e-26,52;UBERON:0006241,3.06e-26,52;UBERON:0007135,3.06e-26,52;UBERON:0002020,4.02e-21,34;UBERON:0003076,4.37e-21,12;UBERON:0003057,4.37e-21,12;UBERON:0002346,1.61e-20,64;UBERON:0003075,1.61e-20,64;UBERON:0007284,1.61e-20,64;UBERON:0004121,2.22e-20,95;UBERON:0000924,2.22e-20,95;UBERON:0006601,2.22e-20,95;UBERON:0002240,2.29e-19,6;UBERON:0005174,2.29e-19,6;UBERON:0001137,2.29e-19,6;UBERON:0010371,1.85e-17,73;UBERON:0001948,3.45e-16,5;UBERON:0002315,3.45e-16,5;UBERON:0002616,7.16e-15,46;UBERON:0000955,1.74e-14,47;UBERON:0006238,1.74e-14,47;UBERON:0002950,4.78e-14,4;UBERON:0001891,4.78e-14,4;UBERON:0009616,4.78e-14,4;UBERON:0010286,4.78e-14,4;UBERON:0010314,5.87e-13,92;UBERON:0003528,2.06e-11,29;UBERON:0002791,2.06e-11,29;UBERON:0001893,2.06e-11,29;UBERON:0003080,4.71e-11,40;UBERON:0002038,5.25e-11,3;UBERON:0009663,5.25e-11,3;UBERON:0009661,5.25e-11,3;UBERON:0000125,5.25e-11,3;UBERON:0002308,5.25e-11,3;UBERON:0002257,2.71e-10,3;UBERON:0002420,5.48e-10,8;UBERON:0007245,5.48e-10,8;UBERON:0010009,5.48e-10,8;UBERON:0010011,5.48e-10,8;UBERON:0000454,5.48e-10,8;UBERON:0000025,1.30e-09,114;UBERON:0002780,1.52e-09,39;UBERON:0001890,1.52e-09,39;UBERON:0006240,1.52e-09,39;UBERON:0004111,1.08e-08,122;UBERON:0003056,1.46e-08,49;UBERON:0001896,2.68e-08,2;UBERON:0002298,2.68e-08,2;UBERON:0005290,2.68e-08,2;UBERON:0010096,2.68e-08,2;UBERON:0002256,1.57e-07,2;UBERON:0011216,1.74e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.510259740906419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0,0,0,0,0,0,0,0,0,1.01158230429799,1.5869729378161,1.26766280701236,0,0,0,0,0,0,0.384218305321555,0.518448061542388,0.540023753326763,0.420649922702764,1.42825492201902,1.98781686856452,0.122490799214954,0.0958454710182364,0,0,1.40456071893706,2.30409799884365,1.18697658957174,0.914876436024097,1.04182674111352,2.51264699101243,2.8138130501584,1.5279824777681,1.76777151284201,1.13897344639282,2.05039390407831,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0.292780797011547,1.04723353406728,0,0,0,0,1.79748767285787,0.457500602818626,0.502617408451458,1.39059456153821,1.79000820131231,1.24672826735736,0.973447578406546,0,0,0,0,0,0,0.540186389416048,0.150704817835715,0.612328492361951,0.512454881139399,0.562210347358373,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.205809224758569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.05046120976805,3.28192722458169,0,0,0,0,0,0,0.222798674082394,0,0,0,0,0.642642632843614,0,0,0,0,0,0,0,0,0,0,0,0,0.712994756769443,0,0,0,0,0.18006109403131,0,0,0.354680467284547,0.356737635204141,0.329098041204242,0,0,0,0.220528398054962,0,0.161464426695906,0,0,0,0,2.41052892613663,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.920650473014354,1.14579102687879,1.54667864109319,0,0.755393897389701,2.70009000092722,0.45032120322422,1.35942722695261,0,0.207574695168353,0,0,0.486213434136588,0,0.551530525350042,0.44449345560323,0.412070114477788,0,0.505394423527595,0,0,0.187283014939765,0.384150914429216,0.287177344778066,0.476293691283074,0,0.38581844092741,0,0,0,0.177475806159338,0.238436189947321,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.394017929502254,0,0.309873682371932,0,0.249810577937946,0,0,0.382576664137687,0,0 | |||
|short_description=p3@B3gat1 | |||
}} |
Revision as of 17:31, 14 September 2013
Short description: | p3@B3gat1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_B3gat1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000067362, ENSMUST00000115269_5end |
EntrezGene: | B3gat1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.62e-28 | 23 |
neuroblast (sensu Vertebrata) | 1.62e-28 | 23 |
neuron | 5.81e-19 | 33 |
neuronal stem cell | 5.81e-19 | 33 |
neuroblast | 5.81e-19 | 33 |
electrically signaling cell | 5.81e-19 | 33 |
electrically responsive cell | 1.40e-15 | 39 |
electrically active cell | 1.40e-15 | 39 |
neural cell | 7.53e-14 | 43 |
ectodermal cell | 1.82e-13 | 44 |
neurectodermal cell | 1.82e-13 | 44 |
neuron of the substantia nigra | 5.25e-11 | 3 |
neuron of the ventral spinal cord | 2.71e-10 | 3 |
granule cell | 9.22e-10 | 3 |
neuron of the dorsal spinal cord | 1.57e-07 | 2 |
embryonic cell | 2.34e-07 | 70 |
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Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.