FFCP PHASE1:Mm9::chrX:133372040..133372053,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=212|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chrX:133372040..133372053,+|id=chrX:133372040..133372053,+|ontology_enrichment_celltype=CL:0000540!2.31e-09!33;CL:0000047!2.31e-09!33;CL:0000031!2.31e-09!33;CL:0000404!2.31e-09!33;CL:0000221!1.81e-08!44;CL:0000133!1.81e-08!44;CL:0002319!7.34e-08!43;CL:0000393!3.49e-07!39;CL:0000211!3.49e-07!39|ontology_enrichment_celltype_v019_2=CL:0002610,5.74e-10,3;CL:0002614,1.70e-08,3;CL:0000117,5.14e-08,23;CL:0000337,5.14e-08,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!2.70e-26!75;UBERON:0001016!2.70e-26!75;UBERON:0004121!1.19e-25!102;UBERON:0000924!1.19e-25!102;UBERON:0006601!1.19e-25!102;UBERON:0001017!2.09e-24!73;UBERON:0005743!2.09e-24!73;UBERON:0002346!5.73e-21!71;UBERON:0003075!5.73e-21!71;UBERON:0007284!5.73e-21!71;UBERON:0000955!1.22e-18!50;UBERON:0006238!1.22e-18!50;UBERON:0001049!1.42e-18!52;UBERON:0005068!1.42e-18!52;UBERON:0006241!1.42e-18!52;UBERON:0007135!1.42e-18!52;UBERON:0002616!1.15e-17!49;UBERON:0000033!1.38e-17!63;UBERON:0002021!1.26e-14!10;UBERON:0000411!1.26e-14!10;UBERON:0001950!1.26e-14!10;UBERON:0002020!3.49e-14!34;UBERON:0003080!2.74e-11!40;UBERON:0003056!3.89e-11!49;UBERON:0002791!4.90e-11!29;UBERON:0003528!4.90e-11!29;UBERON:0001893!4.90e-11!29;UBERON:0002780!2.11e-10!39;UBERON:0001890!2.11e-10!39;UBERON:0006240!2.11e-10!39;UBERON:0007811!3.01e-10!86;UBERON:0002298!3.02e-09!6;UBERON:0002619!4.76e-09!17;UBERON:0003076!8.64e-09!12;UBERON:0003057!8.64e-09!12;UBERON:0000153!1.38e-08!94;UBERON:0000956!3.92e-08!21;UBERON:0001869!3.92e-08!21;UBERON:0000203!3.92e-08!21;UBERON:0000010!4.72e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.60e-37,54;UBERON:0001049,2.42e-32,52;UBERON:0005068,2.42e-32,52;UBERON:0006241,2.42e-32,52;UBERON:0007135,2.42e-32,52;UBERON:0001017,3.01e-32,73;UBERON:0001016,3.16e-31,75;UBERON:0000955,4.32e-28,47;UBERON:0006238,4.32e-28,47;UBERON:0002346,1.99e-27,64;UBERON:0003075,1.99e-27,64;UBERON:0007284,1.99e-27,64;UBERON:0002616,2.34e-26,46;UBERON:0002021,5.42e-26,10;UBERON:0000411,5.42e-26,10;UBERON:0001950,5.42e-26,10;UBERON:0004121,3.42e-25,95;UBERON:0000924,3.42e-25,95;UBERON:0006601,3.42e-25,95;UBERON:0002020,4.89e-24,34;UBERON:0010371,2.49e-23,73;UBERON:0003528,2.29e-20,29;UBERON:0002791,2.29e-20,29;UBERON:0001893,2.29e-20,29;UBERON:0003080,2.89e-20,40;UBERON:0002780,1.38e-18,39;UBERON:0001890,1.38e-18,39;UBERON:0006240,1.38e-18,39;UBERON:0003056,1.08e-17,49;UBERON:0002619,2.41e-17,17;UBERON:0010314,2.64e-17,92;UBERON:0000956,3.71e-16,21;UBERON:0001869,3.71e-16,21;UBERON:0000203,3.71e-16,21;UBERON:0003076,5.58e-13,12;UBERON:0003057,5.58e-13,12;UBERON:0000025,1.22e-11,114;UBERON:0002950,9.79e-11,4;UBERON:0001891,9.79e-11,4;UBERON:0009616,9.79e-11,4;UBERON:0010286,9.79e-11,4;UBERON:0004111,1.69e-10,122;UBERON:0004684,5.74e-10,3;UBERON:0002275,5.74e-10,3;UBERON:0002038,1.70e-08,3;UBERON:0009663,1.70e-08,3;UBERON:0009661,1.70e-08,3;UBERON:0000125,1.70e-08,3;UBERON:0002308,1.70e-08,3;UBERON:0011216,3.35e-08,194;UBERON:0004733,1.58e-07,6;UBERON:0004732,1.58e-07,6;UBERON:0002028,1.58e-07,6;UBERON:0007277,1.58e-07,6;UBERON:0002240,5.68e-07,6;UBERON:0005174,5.68e-07,6;UBERON:0001137,5.68e-07,6;UBERON:0001896,8.15e-07,2;UBERON:0002298,8.15e-07,2;UBERON:0005290,8.15e-07,2;UBERON:0010096,8.15e-07,2|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,1.42825492201902,0.883474163806454,0,0,0,20.9220173898839,21.1960981221412,23.6554061214615,0.131886287730194,0,0,2.79182999001381,2.8138130501584,11.4598685832608,4.12480019663135,1.28134512719193,0,0.681535739998656,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,3.22058876712702,4.39838084308256,0,0,0,0,3.89455662452539,7.32000964509802,0,2.25971616249959,3.3243009452943,6.02585329222724,10.5456820994042,0,0,0,0.841767423545896,0,0,0,0.150704817835715,0,0,0,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.32833492815819,0,0.146199987425332,0,0,1.47202963994889,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,8.34863067936518,18.7538698547525,0,0,0.631016438832513,0,0.861693590931196,0,0.891194696329576,1.41538265394416,0.404810701674894,0.584511715822624,0.790575555893047,1.60660658210904,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,14.2777482548092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,16.942555278512,11.9684561491866,17.7597609166213,7.04598047609119,4.7955776383945,9.06472676867641,9.45031500324528,1.80128481289688,2.26571204492102,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chrX:133372040..133372053,+}} | ||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=212 | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chrX:133372040..133372053,+ | |||
|id=chrX:133372040..133372053,+ | |||
|ontology_enrichment_celltype=CL:0000540!2.31e-09!33;CL:0000047!2.31e-09!33;CL:0000031!2.31e-09!33;CL:0000404!2.31e-09!33;CL:0000221!1.81e-08!44;CL:0000133!1.81e-08!44;CL:0002319!7.34e-08!43;CL:0000393!3.49e-07!39;CL:0000211!3.49e-07!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0002610,5.74e-10,3;CL:0002614,1.70e-08,3;CL:0000117,5.14e-08,23;CL:0000337,5.14e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.70e-26!75;UBERON:0001016!2.70e-26!75;UBERON:0004121!1.19e-25!102;UBERON:0000924!1.19e-25!102;UBERON:0006601!1.19e-25!102;UBERON:0001017!2.09e-24!73;UBERON:0005743!2.09e-24!73;UBERON:0002346!5.73e-21!71;UBERON:0003075!5.73e-21!71;UBERON:0007284!5.73e-21!71;UBERON:0000955!1.22e-18!50;UBERON:0006238!1.22e-18!50;UBERON:0001049!1.42e-18!52;UBERON:0005068!1.42e-18!52;UBERON:0006241!1.42e-18!52;UBERON:0007135!1.42e-18!52;UBERON:0002616!1.15e-17!49;UBERON:0000033!1.38e-17!63;UBERON:0002021!1.26e-14!10;UBERON:0000411!1.26e-14!10;UBERON:0001950!1.26e-14!10;UBERON:0002020!3.49e-14!34;UBERON:0003080!2.74e-11!40;UBERON:0003056!3.89e-11!49;UBERON:0002791!4.90e-11!29;UBERON:0003528!4.90e-11!29;UBERON:0001893!4.90e-11!29;UBERON:0002780!2.11e-10!39;UBERON:0001890!2.11e-10!39;UBERON:0006240!2.11e-10!39;UBERON:0007811!3.01e-10!86;UBERON:0002298!3.02e-09!6;UBERON:0002619!4.76e-09!17;UBERON:0003076!8.64e-09!12;UBERON:0003057!8.64e-09!12;UBERON:0000153!1.38e-08!94;UBERON:0000956!3.92e-08!21;UBERON:0001869!3.92e-08!21;UBERON:0000203!3.92e-08!21;UBERON:0000010!4.72e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.60e-37,54;UBERON:0001049,2.42e-32,52;UBERON:0005068,2.42e-32,52;UBERON:0006241,2.42e-32,52;UBERON:0007135,2.42e-32,52;UBERON:0001017,3.01e-32,73;UBERON:0001016,3.16e-31,75;UBERON:0000955,4.32e-28,47;UBERON:0006238,4.32e-28,47;UBERON:0002346,1.99e-27,64;UBERON:0003075,1.99e-27,64;UBERON:0007284,1.99e-27,64;UBERON:0002616,2.34e-26,46;UBERON:0002021,5.42e-26,10;UBERON:0000411,5.42e-26,10;UBERON:0001950,5.42e-26,10;UBERON:0004121,3.42e-25,95;UBERON:0000924,3.42e-25,95;UBERON:0006601,3.42e-25,95;UBERON:0002020,4.89e-24,34;UBERON:0010371,2.49e-23,73;UBERON:0003528,2.29e-20,29;UBERON:0002791,2.29e-20,29;UBERON:0001893,2.29e-20,29;UBERON:0003080,2.89e-20,40;UBERON:0002780,1.38e-18,39;UBERON:0001890,1.38e-18,39;UBERON:0006240,1.38e-18,39;UBERON:0003056,1.08e-17,49;UBERON:0002619,2.41e-17,17;UBERON:0010314,2.64e-17,92;UBERON:0000956,3.71e-16,21;UBERON:0001869,3.71e-16,21;UBERON:0000203,3.71e-16,21;UBERON:0003076,5.58e-13,12;UBERON:0003057,5.58e-13,12;UBERON:0000025,1.22e-11,114;UBERON:0002950,9.79e-11,4;UBERON:0001891,9.79e-11,4;UBERON:0009616,9.79e-11,4;UBERON:0010286,9.79e-11,4;UBERON:0004111,1.69e-10,122;UBERON:0004684,5.74e-10,3;UBERON:0002275,5.74e-10,3;UBERON:0002038,1.70e-08,3;UBERON:0009663,1.70e-08,3;UBERON:0009661,1.70e-08,3;UBERON:0000125,1.70e-08,3;UBERON:0002308,1.70e-08,3;UBERON:0011216,3.35e-08,194;UBERON:0004733,1.58e-07,6;UBERON:0004732,1.58e-07,6;UBERON:0002028,1.58e-07,6;UBERON:0007277,1.58e-07,6;UBERON:0002240,5.68e-07,6;UBERON:0005174,5.68e-07,6;UBERON:0001137,5.68e-07,6;UBERON:0001896,8.15e-07,2;UBERON:0002298,8.15e-07,2;UBERON:0005290,8.15e-07,2;UBERON:0010096,8.15e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,1.42825492201902,0.883474163806454,0,0,0,20.9220173898839,21.1960981221412,23.6554061214615,0.131886287730194,0,0,2.79182999001381,2.8138130501584,11.4598685832608,4.12480019663135,1.28134512719193,0,0.681535739998656,0.68014404096107,0,0,0,0,0,0,0.140444420131752,0,0,0,0.281686839553361,0,0,0,0,0,0,0,0,0,0,0,0.230615497256059,0.150722640552623,0.23517741427141,0.125666591329675,0,0,0,0,0,0,0,3.22058876712702,4.39838084308256,0,0,0,0,3.89455662452539,7.32000964509802,0,2.25971616249959,3.3243009452943,6.02585329222724,10.5456820994042,0,0,0,0.841767423545896,0,0,0,0.150704817835715,0,0,0,4.65666067330228,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23674473558521,0,0,0,0,0,0,0.32833492815819,0,0.146199987425332,0,0,1.47202963994889,0,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327726629431476,0,0,0,0,0,0,8.34863067936518,18.7538698547525,0,0,0.631016438832513,0,0.861693590931196,0,0.891194696329576,1.41538265394416,0.404810701674894,0.584511715822624,0.790575555893047,1.60660658210904,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0.356497378384721,0,0,0,0.340439605753788,0,0,0,0,0,0,0,0,0,0,0,0,0.0603129249281559,0,0,0,14.2777482548092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.234714477291508,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,16.942555278512,11.9684561491866,17.7597609166213,7.04598047609119,4.7955776383945,9.06472676867641,9.45031500324528,1.80128481289688,2.26571204492102,4.65984280576638,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0.188218760830661,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chrX:133372040..133372053,+ | |||
}} |
Revision as of 19:21, 14 September 2013
Short description: | p@chrX:133372040..133372053, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chrX:133372040..133372053, + |
Coexpression cluster: | MCL_coexpression_mm9:212 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 5.74e-10 | 3 |
neuron of the substantia nigra | 1.70e-08 | 3 |
CNS neuron (sensu Vertebrata) | 5.14e-08 | 23 |
neuroblast (sensu Vertebrata) | 5.14e-08 | 23 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.