FFCP PHASE1:Mm9::chrX:20937982..20938025,+: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=331392|HGNC=|MCL_coexpression_id=13|UniProt=Q8C000|association_with_transcript=0bp_to_ENSMUST00000127554,NM_198633,uc009sup.2_5end|description=CAGE_peak_1_at_Gm5124_5end|id=chrX:20937982..20938025,+|ontology_enrichment_celltype=CL:0000540!1.33e-16!33;CL:0000047!1.33e-16!33;CL:0000031!1.33e-16!33;CL:0000404!1.33e-16!33;CL:0000117!5.19e-15!23;CL:0000337!5.19e-15!23;CL:0000393!7.27e-12!39;CL:0000211!7.27e-12!39;CL:0000221!2.01e-11!44;CL:0000133!2.01e-11!44;CL:0002319!2.64e-11!43;CL:0000055!9.34e-08!50|ontology_enrichment_celltype_v019_2=CL:0000540,7.67e-21,33;CL:0000047,7.67e-21,33;CL:0000031,7.67e-21,33;CL:0000404,7.67e-21,33;CL:0000117,1.54e-19,23;CL:0000337,1.54e-19,23;CL:0000393,1.32e-15,39;CL:0000211,1.32e-15,39;CL:0000221,3.74e-13,44;CL:0000133,3.74e-13,44;CL:0002319,5.44e-13,43|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!3.68e-27!73;UBERON:0005743!3.68e-27!73;UBERON:0000073!5.43e-27!75;UBERON:0001016!5.43e-27!75;UBERON:0004121!1.81e-26!102;UBERON:0000924!1.81e-26!102;UBERON:0006601!1.81e-26!102;UBERON:0002346!5.15e-26!71;UBERON:0003075!5.15e-26!71;UBERON:0007284!5.15e-26!71;UBERON:0000033!7.62e-23!63;UBERON:0001049!2.31e-22!52;UBERON:0005068!2.31e-22!52;UBERON:0006241!2.31e-22!52;UBERON:0007135!2.31e-22!52;UBERON:0000955!2.10e-21!50;UBERON:0006238!2.10e-21!50;UBERON:0002616!9.18e-21!49;UBERON:0003056!1.93e-19!49;UBERON:0002020!1.92e-17!34;UBERON:0003080!2.24e-17!40;UBERON:0002780!1.22e-16!39;UBERON:0001890!1.22e-16!39;UBERON:0006240!1.22e-16!39;UBERON:0002791!1.83e-14!29;UBERON:0003528!1.83e-14!29;UBERON:0001893!1.83e-14!29;UBERON:0000153!1.24e-13!94;UBERON:0007811!6.90e-13!86;UBERON:0000956!2.31e-09!21;UBERON:0001869!2.31e-09!21;UBERON:0000203!2.31e-09!21;UBERON:0002619!2.03e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.75e-35,73;UBERON:0001016,1.61e-33,75;UBERON:0002346,4.18e-33,64;UBERON:0003075,4.18e-33,64;UBERON:0007284,4.18e-33,64;UBERON:0000073,2.29e-31,54;UBERON:0004121,6.19e-31,95;UBERON:0000924,6.19e-31,95;UBERON:0006601,6.19e-31,95;UBERON:0001049,2.91e-29,52;UBERON:0005068,2.91e-29,52;UBERON:0006241,2.91e-29,52;UBERON:0007135,2.91e-29,52;UBERON:0010371,3.46e-29,73;UBERON:0000955,4.78e-25,47;UBERON:0006238,4.78e-25,47;UBERON:0003056,5.08e-25,49;UBERON:0002616,3.28e-24,46;UBERON:0002020,4.22e-23,34;UBERON:0003080,5.44e-23,40;UBERON:0002780,5.32e-22,39;UBERON:0001890,5.32e-22,39;UBERON:0006240,5.32e-22,39;UBERON:0010314,2.35e-20,92;UBERON:0003528,4.19e-19,29;UBERON:0002791,4.19e-19,29;UBERON:0001893,4.19e-19,29;UBERON:0000956,2.93e-12,21;UBERON:0001869,2.93e-12,21;UBERON:0000203,2.93e-12,21;UBERON:0002619,1.17e-09,17;UBERON:0002021,2.23e-08,10;UBERON:0000411,2.23e-08,10;UBERON:0001950,2.23e-08,10;UBERON:0002420,2.87e-08,8;UBERON:0007245,2.87e-08,8;UBERON:0010009,2.87e-08,8;UBERON:0010011,2.87e-08,8;UBERON:0000454,2.87e-08,8;UBERON:0003076,9.74e-07,12;UBERON:0003057,9.74e-07,12|phase1_expression=1.76163731815273,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0.34243593645101,0.398860794976682,0.171200729931206,0.262261207256992,0,0,0,0.157731082679119,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0.756090389279792,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.872100625521786,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,17.601532094785,20.6306481916093,12.0427966666174,0,0,0,0,0,0.299600110518405,0,5.80661828927475,8.37036817656482,6.73039876324422,9.14083150092171,6.84692476950002,9.79926393719632,8.72193786265951,5.51531271966013,22.0231761998777,20.3022867555448,21.3513081226178,16.6176722540044,18.9379422256988,20.8365348222704,18.9844439320939,25.8870800614573,20.0165704587621,12.6690291753677,17.6540884190888,19.3855423658313,0.454357159999104,0.906858721281426,0,0,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0,0.506719730950197,0,0.45673551887624,0.258937883647172,0.593768556259299,1.56136794089522,1.21786191324856,0.461230994512117,1.80867168663147,1.41106448562846,0.628332956648377,0,0.578397427679647,0,0.323533699894818,0.883366073841574,0,0,5.5628351432194,3.77004072264219,0.255457055208591,0.359445373517761,0,0.127070227073065,27.7112682898922,16.4700217014706,12.3141265070607,13.0368240144207,12.2743419518559,18.2853479212413,16.710850095979,1.83310854930569,0.373220911830279,0.505445516867349,0.631325567659422,2.21204753036596,1.83921683546778,2.52086981727489,2.41127708537144,2.72145996605311,2.562274405697,1.78033276663485,2.84573707812917,1.29340795759705,2.08016688184601,0.879755620819744,1.7535658594206,1.66828349535359,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.590292695242212,0.771335564436891,0.930135779001631,0.268273401399619,0.467061369468678,0.16455984991348,0.492502392237286,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,14.930586348053,11.216602749342,0.660837565967596,0.264450566663544,1.49301775374664,1.393420031162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| ||
|EntrezGene=331392 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|UniProt=Q8C000 | |||
|association_with_transcript=0bp_to_ENSMUST00000127554,NM_198633,uc009sup.2_5end | |||
|description=CAGE_peak_1_at_Gm5124_5end | |||
|id=chrX:20937982..20938025,+ | |||
|ontology_enrichment_celltype=CL:0000540!1.33e-16!33;CL:0000047!1.33e-16!33;CL:0000031!1.33e-16!33;CL:0000404!1.33e-16!33;CL:0000117!5.19e-15!23;CL:0000337!5.19e-15!23;CL:0000393!7.27e-12!39;CL:0000211!7.27e-12!39;CL:0000221!2.01e-11!44;CL:0000133!2.01e-11!44;CL:0002319!2.64e-11!43;CL:0000055!9.34e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,7.67e-21,33;CL:0000047,7.67e-21,33;CL:0000031,7.67e-21,33;CL:0000404,7.67e-21,33;CL:0000117,1.54e-19,23;CL:0000337,1.54e-19,23;CL:0000393,1.32e-15,39;CL:0000211,1.32e-15,39;CL:0000221,3.74e-13,44;CL:0000133,3.74e-13,44;CL:0002319,5.44e-13,43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.68e-27!73;UBERON:0005743!3.68e-27!73;UBERON:0000073!5.43e-27!75;UBERON:0001016!5.43e-27!75;UBERON:0004121!1.81e-26!102;UBERON:0000924!1.81e-26!102;UBERON:0006601!1.81e-26!102;UBERON:0002346!5.15e-26!71;UBERON:0003075!5.15e-26!71;UBERON:0007284!5.15e-26!71;UBERON:0000033!7.62e-23!63;UBERON:0001049!2.31e-22!52;UBERON:0005068!2.31e-22!52;UBERON:0006241!2.31e-22!52;UBERON:0007135!2.31e-22!52;UBERON:0000955!2.10e-21!50;UBERON:0006238!2.10e-21!50;UBERON:0002616!9.18e-21!49;UBERON:0003056!1.93e-19!49;UBERON:0002020!1.92e-17!34;UBERON:0003080!2.24e-17!40;UBERON:0002780!1.22e-16!39;UBERON:0001890!1.22e-16!39;UBERON:0006240!1.22e-16!39;UBERON:0002791!1.83e-14!29;UBERON:0003528!1.83e-14!29;UBERON:0001893!1.83e-14!29;UBERON:0000153!1.24e-13!94;UBERON:0007811!6.90e-13!86;UBERON:0000956!2.31e-09!21;UBERON:0001869!2.31e-09!21;UBERON:0000203!2.31e-09!21;UBERON:0002619!2.03e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.75e-35,73;UBERON:0001016,1.61e-33,75;UBERON:0002346,4.18e-33,64;UBERON:0003075,4.18e-33,64;UBERON:0007284,4.18e-33,64;UBERON:0000073,2.29e-31,54;UBERON:0004121,6.19e-31,95;UBERON:0000924,6.19e-31,95;UBERON:0006601,6.19e-31,95;UBERON:0001049,2.91e-29,52;UBERON:0005068,2.91e-29,52;UBERON:0006241,2.91e-29,52;UBERON:0007135,2.91e-29,52;UBERON:0010371,3.46e-29,73;UBERON:0000955,4.78e-25,47;UBERON:0006238,4.78e-25,47;UBERON:0003056,5.08e-25,49;UBERON:0002616,3.28e-24,46;UBERON:0002020,4.22e-23,34;UBERON:0003080,5.44e-23,40;UBERON:0002780,5.32e-22,39;UBERON:0001890,5.32e-22,39;UBERON:0006240,5.32e-22,39;UBERON:0010314,2.35e-20,92;UBERON:0003528,4.19e-19,29;UBERON:0002791,4.19e-19,29;UBERON:0001893,4.19e-19,29;UBERON:0000956,2.93e-12,21;UBERON:0001869,2.93e-12,21;UBERON:0000203,2.93e-12,21;UBERON:0002619,1.17e-09,17;UBERON:0002021,2.23e-08,10;UBERON:0000411,2.23e-08,10;UBERON:0001950,2.23e-08,10;UBERON:0002420,2.87e-08,8;UBERON:0007245,2.87e-08,8;UBERON:0010009,2.87e-08,8;UBERON:0010011,2.87e-08,8;UBERON:0000454,2.87e-08,8;UBERON:0003076,9.74e-07,12;UBERON:0003057,9.74e-07,12 | |||
|phase1_expression=1.76163731815273,0,0,0,0,0,0,0.129123323441576,0.281577444303333,0.468129052643987,0.34243593645101,0.398860794976682,0.171200729931206,0.262261207256992,0,0,0,0.157731082679119,0,0,1.9559956734746,0,0,0,0,0,0,0,0,0.756090389279792,0,0,0,0,0,0.332469290716985,0,0,0,0,0,0,0,0,0,0.367093504323363,0,0.872100625521786,0,0.194429899074283,0.279972843250725,0,0,0,0,0.257259436035947,0,0,17.601532094785,20.6306481916093,12.0427966666174,0,0,0,0,0,0.299600110518405,0,5.80661828927475,8.37036817656482,6.73039876324422,9.14083150092171,6.84692476950002,9.79926393719632,8.72193786265951,5.51531271966013,22.0231761998777,20.3022867555448,21.3513081226178,16.6176722540044,18.9379422256988,20.8365348222704,18.9844439320939,25.8870800614573,20.0165704587621,12.6690291753677,17.6540884190888,19.3855423658313,0.454357159999104,0.906858721281426,0,0,0,0,0,0,0.561777680527007,0,0,0,1.26759077799012,0,0,0,0,0.506719730950197,0,0.45673551887624,0.258937883647172,0.593768556259299,1.56136794089522,1.21786191324856,0.461230994512117,1.80867168663147,1.41106448562846,0.628332956648377,0,0.578397427679647,0,0.323533699894818,0.883366073841574,0,0,5.5628351432194,3.77004072264219,0.255457055208591,0.359445373517761,0,0.127070227073065,27.7112682898922,16.4700217014706,12.3141265070607,13.0368240144207,12.2743419518559,18.2853479212413,16.710850095979,1.83310854930569,0.373220911830279,0.505445516867349,0.631325567659422,2.21204753036596,1.83921683546778,2.52086981727489,2.41127708537144,2.72145996605311,2.562274405697,1.78033276663485,2.84573707812917,1.29340795759705,2.08016688184601,0.879755620819744,1.7535658594206,1.66828349535359,0.348252166522167,0.823128545631774,0.398068533636986,0,0,0,0,0.234526059981096,0.36012412292203,0.473489471170421,0.590292695242212,0.771335564436891,0.930135779001631,0.268273401399619,0.467061369468678,0.16455984991348,0.492502392237286,0.0810688095458557,0.146199987425332,0.219550115291051,0.134206418760372,14.930586348053,11.216602749342,0.660837565967596,0.264450566663544,1.49301775374664,1.39342003116263,0.515469845288373,0.80673409849337,0.444756087689741,0,0,0.494096864172033,0.502670417600539,0.596869416123452,0.19496408711912,0,0,0.199141273254367,0.379335801906163,0.685491075658373,0,0.814605311381257,0.969762435838129,0.210407459670956,0.189709611372772,0.295220295959204,0,0.123397163921801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.325929952884052,0.339490171550376,0.234690248288502,0,0.238043640886014,0,0.315270288212382,0,0,0.163863314715738,0,0,0,0,2.45882136509518,0.827810238914197,21.3532284683763,16.8784828692773,0,0.757412781613119,2.83957397474631,1.95219372148319,4.09304455692318,0.716906393857656,2.22798674082394,1.13230612315533,2.83367491172426,3.21481443702443,1.58115111178609,13.4954952897159,0.99358059645788,1.06839362200353,1.62886959353576,1.15479086080775,0,0.242780636154981,0.906970670894253,0.188605079755898,0.590603785761546,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,3.74483566329167,2.70091641046965,1.16422815404479,1.50035924522115,1.06404140185364,1.24858172321449,1.15184314421485,1.2178597964584,0.469343416127421,0,1.54369878638473,0,0.484393280087717,0.180938774784468,0.119372344003136,0,0,17.4299783889879,0.170870880797853,0.412773735926445,0,0,0.136694227721025,0,0.339956859987711,0.279902904647316,0.552799895217695,0,0.316335993581135,0.609958401380546,0.756037385752609,0.836353184057875,0.218362563746178,0.674321731924103,0.495920734352016,0,0.129614973291793,0.621339313086926,0,0.149516546043979,0.66183396182839,0.777804753376191,0.904118764344118,1.01373675294467,1.17357238645754,0.13020438484395,0.104859344425711,0,0,0.316011120628178,0,0.102710957164827,0,0,0.198681354781265,0.120195449519969,0.443068581523732,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0.772758376128762,0.187682475451182,0.73260649706906,0,1.50471631210609,12.4245405375755,11.9684561491866,12.0308057822273,9.10821866421544,5.48066015816514,8.3093328712867,9.45031500324528,11.7083512838297,21.7508356312418,8.80192529978094,2.80225838477277,5.1873233542134,2.56100408631201,2.91728060481953,3.35381060204772,3.30918315210025,3.33370091702423,3.5025959730612,4.1719497246936,2.02157769411038,3.04175159868288,3.01802146217722,3.55837728385553,3.39333307745807,2.92920891673628,3.81034953026459,2.78122382267653,1.54327376370964,3.70877310722976,2.50238164228475,3.77156177623957,2.30718548007139,3.81497903915713,2.18019624948493,3.57615645578256,2.36920902096694,2.56099162021882,2.36762740294059,1.90125759384206,2.24456908663095,1.89816028998679,3.74317033027141,2.04615521584845,2.32405261778949,1.92906610981141,5.49583271463481,1.40358965067245,1.28922632428979,2.10417165275728,0.882365676478062,1.15933917810211 | |||
|short_description=p1@Gm5124 | |||
}} |
Revision as of 19:44, 14 September 2013
Short description: | p1@Gm5124 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gm5124_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000127554, NM_198633, uc009sup.2_5end |
EntrezGene: | Gm5124 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 7.67e-21 | 33 |
neuronal stem cell | 7.67e-21 | 33 |
neuroblast | 7.67e-21 | 33 |
electrically signaling cell | 7.67e-21 | 33 |
CNS neuron (sensu Vertebrata) | 1.54e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.54e-19 | 23 |
electrically responsive cell | 1.32e-15 | 39 |
electrically active cell | 1.32e-15 | 39 |
ectodermal cell | 3.74e-13 | 44 |
neurectodermal cell | 3.74e-13 | 44 |
neural cell | 5.44e-13 | 43 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.