FFCP PHASE1:Mm9::chrX:40782022..40782039,-: Difference between revisions
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{{FFCP | {{FFCP|EntrezGene=23963|HGNC=|MCL_coexpression_id=39|UniProt=|association_with_transcript=140bp_to_ENSMUST00000125231,ENSMUST00000154433_5end|description=CAGE_peak_4_at_Odz1_5end|id=chrX:40782022..40782039,-|ontology_enrichment_celltype=CL:0000117!3.64e-14!23;CL:0000337!3.64e-14!23;CL:0000540!4.46e-08!33;CL:0000047!4.46e-08!33;CL:0000031!4.46e-08!33;CL:0000404!4.46e-08!33|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-19,23;CL:0000337,1.64e-19,23;CL:0000540,2.99e-12,33;CL:0000047,2.99e-12,33;CL:0000031,2.99e-12,33;CL:0000404,2.99e-12,33;CL:0000393,1.04e-09,39;CL:0000211,1.04e-09,39;CL:0002319,2.03e-08,43;CL:0000221,3.90e-08,44;CL:0000133,3.90e-08,44;CL:0002610,4.01e-07,3;CL:0002612,7.16e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!7.42e-29!71;UBERON:0003075!7.42e-29!71;UBERON:0007284!7.42e-29!71;UBERON:0001049!1.44e-26!52;UBERON:0005068!1.44e-26!52;UBERON:0006241!1.44e-26!52;UBERON:0007135!1.44e-26!52;UBERON:0000033!5.05e-26!63;UBERON:0000955!3.23e-25!50;UBERON:0006238!3.23e-25!50;UBERON:0002616!1.96e-24!49;UBERON:0001017!2.78e-24!73;UBERON:0005743!2.78e-24!73;UBERON:0003056!2.96e-24!49;UBERON:0000073!1.10e-23!75;UBERON:0001016!1.10e-23!75;UBERON:0004121!6.87e-22!102;UBERON:0000924!6.87e-22!102;UBERON:0006601!6.87e-22!102;UBERON:0003080!2.40e-20!40;UBERON:0002780!1.33e-19!39;UBERON:0001890!1.33e-19!39;UBERON:0006240!1.33e-19!39;UBERON:0002020!1.56e-19!34;UBERON:0002791!1.21e-15!29;UBERON:0003528!1.21e-15!29;UBERON:0001893!1.21e-15!29;UBERON:0007811!1.40e-15!86;UBERON:0000153!2.60e-15!94;UBERON:0000956!4.93e-10!21;UBERON:0001869!4.93e-10!21;UBERON:0000203!4.93e-10!21;UBERON:0002021!2.99e-09!10;UBERON:0000411!2.99e-09!10;UBERON:0001950!2.99e-09!10;UBERON:0002619!5.25e-08!17;UBERON:0002420!4.34e-07!8;UBERON:0007245!4.34e-07!8;UBERON:0010009!4.34e-07!8;UBERON:0010011!4.34e-07!8;UBERON:0000454!4.34e-07!8;UBERON:0003076!9.64e-07!12;UBERON:0003057!9.64e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.66e-48,54;UBERON:0001049,4.93e-44,52;UBERON:0005068,4.93e-44,52;UBERON:0006241,4.93e-44,52;UBERON:0007135,4.93e-44,52;UBERON:0001017,2.32e-41,73;UBERON:0001016,5.56e-40,75;UBERON:0002346,6.29e-38,64;UBERON:0003075,6.29e-38,64;UBERON:0007284,6.29e-38,64;UBERON:0000955,8.43e-36,47;UBERON:0006238,8.43e-36,47;UBERON:0002616,2.91e-34,46;UBERON:0004121,1.57e-32,95;UBERON:0000924,1.57e-32,95;UBERON:0006601,1.57e-32,95;UBERON:0010371,4.91e-32,73;UBERON:0002020,5.51e-32,34;UBERON:0003080,8.43e-30,40;UBERON:0002780,2.51e-28,39;UBERON:0001890,2.51e-28,39;UBERON:0006240,2.51e-28,39;UBERON:0003056,1.44e-26,49;UBERON:0003528,5.03e-24,29;UBERON:0002791,5.03e-24,29;UBERON:0001893,5.03e-24,29;UBERON:0010314,2.21e-23,92;UBERON:0002021,1.71e-15,10;UBERON:0000411,1.71e-15,10;UBERON:0001950,1.71e-15,10;UBERON:0000025,6.91e-15,114;UBERON:0003076,3.68e-14,12;UBERON:0003057,3.68e-14,12;UBERON:0002420,1.50e-13,8;UBERON:0007245,1.50e-13,8;UBERON:0010009,1.50e-13,8;UBERON:0010011,1.50e-13,8;UBERON:0000454,1.50e-13,8;UBERON:0004111,2.72e-13,122;UBERON:0000956,6.79e-13,21;UBERON:0001869,6.79e-13,21;UBERON:0000203,6.79e-13,21;UBERON:0002619,4.20e-12,17;UBERON:0002240,5.23e-11,6;UBERON:0005174,5.23e-11,6;UBERON:0001137,5.23e-11,6;UBERON:0001948,1.35e-09,5;UBERON:0002315,1.35e-09,5;UBERON:0011216,4.89e-09,194;UBERON:0000369,6.39e-09,5;UBERON:0002435,6.39e-09,5;UBERON:0000204,6.39e-09,5;UBERON:0010082,6.39e-09,5;UBERON:0000483,8.83e-08,174;UBERON:0002950,1.07e-07,4;UBERON:0001891,1.07e-07,4;UBERON:0009616,1.07e-07,4;UBERON:0010286,1.07e-07,4;UBERON:0000119,1.39e-07,176;UBERON:0004684,4.01e-07,3;UBERON:0002275,4.01e-07,3;UBERON:0002257,7.16e-07,3|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,4.43681982454325,0,0,0,0,0,0.299600110518405,0,0.933206510776299,0.405017814995072,1.05162480675691,2.28520787523043,1.76694832761291,0.979926393719632,0.191690942036473,0,11.0115880999389,5.61824287574826,8.1411462625809,1.71452174049252,2.28719109006024,2.08365348222704,1.95428099300967,4.50210088025344,4.5839474333043,6.48182888042069,11.2473627831291,3.16879057903011,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,27.5213949190854,23.458031163107,0,0,0,0,2.54644086988199,5.03250663100489,2.63874139437015,4.17178368461463,3.06858548796397,4.98691306942944,2.10913641988085,0.203678727700633,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.360124259610698,0.90422890701429,0.272145996605311,1.15302348256365,0.749613796477831,1.55222022443409,0,0,0.175951124163949,0,1.39023624612799,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0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| ||
|EntrezGene=23963 | |||
|HGNC= | |||
|MCL_coexpression_id=39 | |||
|UniProt= | |||
|association_with_transcript=140bp_to_ENSMUST00000125231,ENSMUST00000154433_5end | |||
|description=CAGE_peak_4_at_Odz1_5end | |||
|id=chrX:40782022..40782039,- | |||
|ontology_enrichment_celltype=CL:0000117!3.64e-14!23;CL:0000337!3.64e-14!23;CL:0000540!4.46e-08!33;CL:0000047!4.46e-08!33;CL:0000031!4.46e-08!33;CL:0000404!4.46e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.64e-19,23;CL:0000337,1.64e-19,23;CL:0000540,2.99e-12,33;CL:0000047,2.99e-12,33;CL:0000031,2.99e-12,33;CL:0000404,2.99e-12,33;CL:0000393,1.04e-09,39;CL:0000211,1.04e-09,39;CL:0002319,2.03e-08,43;CL:0000221,3.90e-08,44;CL:0000133,3.90e-08,44;CL:0002610,4.01e-07,3;CL:0002612,7.16e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!7.42e-29!71;UBERON:0003075!7.42e-29!71;UBERON:0007284!7.42e-29!71;UBERON:0001049!1.44e-26!52;UBERON:0005068!1.44e-26!52;UBERON:0006241!1.44e-26!52;UBERON:0007135!1.44e-26!52;UBERON:0000033!5.05e-26!63;UBERON:0000955!3.23e-25!50;UBERON:0006238!3.23e-25!50;UBERON:0002616!1.96e-24!49;UBERON:0001017!2.78e-24!73;UBERON:0005743!2.78e-24!73;UBERON:0003056!2.96e-24!49;UBERON:0000073!1.10e-23!75;UBERON:0001016!1.10e-23!75;UBERON:0004121!6.87e-22!102;UBERON:0000924!6.87e-22!102;UBERON:0006601!6.87e-22!102;UBERON:0003080!2.40e-20!40;UBERON:0002780!1.33e-19!39;UBERON:0001890!1.33e-19!39;UBERON:0006240!1.33e-19!39;UBERON:0002020!1.56e-19!34;UBERON:0002791!1.21e-15!29;UBERON:0003528!1.21e-15!29;UBERON:0001893!1.21e-15!29;UBERON:0007811!1.40e-15!86;UBERON:0000153!2.60e-15!94;UBERON:0000956!4.93e-10!21;UBERON:0001869!4.93e-10!21;UBERON:0000203!4.93e-10!21;UBERON:0002021!2.99e-09!10;UBERON:0000411!2.99e-09!10;UBERON:0001950!2.99e-09!10;UBERON:0002619!5.25e-08!17;UBERON:0002420!4.34e-07!8;UBERON:0007245!4.34e-07!8;UBERON:0010009!4.34e-07!8;UBERON:0010011!4.34e-07!8;UBERON:0000454!4.34e-07!8;UBERON:0003076!9.64e-07!12;UBERON:0003057!9.64e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.66e-48,54;UBERON:0001049,4.93e-44,52;UBERON:0005068,4.93e-44,52;UBERON:0006241,4.93e-44,52;UBERON:0007135,4.93e-44,52;UBERON:0001017,2.32e-41,73;UBERON:0001016,5.56e-40,75;UBERON:0002346,6.29e-38,64;UBERON:0003075,6.29e-38,64;UBERON:0007284,6.29e-38,64;UBERON:0000955,8.43e-36,47;UBERON:0006238,8.43e-36,47;UBERON:0002616,2.91e-34,46;UBERON:0004121,1.57e-32,95;UBERON:0000924,1.57e-32,95;UBERON:0006601,1.57e-32,95;UBERON:0010371,4.91e-32,73;UBERON:0002020,5.51e-32,34;UBERON:0003080,8.43e-30,40;UBERON:0002780,2.51e-28,39;UBERON:0001890,2.51e-28,39;UBERON:0006240,2.51e-28,39;UBERON:0003056,1.44e-26,49;UBERON:0003528,5.03e-24,29;UBERON:0002791,5.03e-24,29;UBERON:0001893,5.03e-24,29;UBERON:0010314,2.21e-23,92;UBERON:0002021,1.71e-15,10;UBERON:0000411,1.71e-15,10;UBERON:0001950,1.71e-15,10;UBERON:0000025,6.91e-15,114;UBERON:0003076,3.68e-14,12;UBERON:0003057,3.68e-14,12;UBERON:0002420,1.50e-13,8;UBERON:0007245,1.50e-13,8;UBERON:0010009,1.50e-13,8;UBERON:0010011,1.50e-13,8;UBERON:0000454,1.50e-13,8;UBERON:0004111,2.72e-13,122;UBERON:0000956,6.79e-13,21;UBERON:0001869,6.79e-13,21;UBERON:0000203,6.79e-13,21;UBERON:0002619,4.20e-12,17;UBERON:0002240,5.23e-11,6;UBERON:0005174,5.23e-11,6;UBERON:0001137,5.23e-11,6;UBERON:0001948,1.35e-09,5;UBERON:0002315,1.35e-09,5;UBERON:0011216,4.89e-09,194;UBERON:0000369,6.39e-09,5;UBERON:0002435,6.39e-09,5;UBERON:0000204,6.39e-09,5;UBERON:0010082,6.39e-09,5;UBERON:0000483,8.83e-08,174;UBERON:0002950,1.07e-07,4;UBERON:0001891,1.07e-07,4;UBERON:0009616,1.07e-07,4;UBERON:0010286,1.07e-07,4;UBERON:0000119,1.39e-07,176;UBERON:0004684,4.01e-07,3;UBERON:0002275,4.01e-07,3;UBERON:0002257,7.16e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.404632921719196,1.5869729378161,4.43681982454325,0,0,0,0,0,0.299600110518405,0,0.933206510776299,0.405017814995072,1.05162480675691,2.28520787523043,1.76694832761291,0.979926393719632,0.191690942036473,0,11.0115880999389,5.61824287574826,8.1411462625809,1.71452174049252,2.28719109006024,2.08365348222704,1.95428099300967,4.50210088025344,4.5839474333043,6.48182888042069,11.2473627831291,3.16879057903011,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0.304465478312141,0,0.150722640552623,0.23517741427141,0,0,0,0,0,0,0,0,27.5213949190854,23.458031163107,0,0,0,0,2.54644086988199,5.03250663100489,2.63874139437015,4.17178368461463,3.06858548796397,4.98691306942944,2.10913641988085,0.203678727700633,0,0,0.210441855886474,0.520481771850815,0.459804208866946,0.360124259610698,0.90422890701429,0.272145996605311,1.15302348256365,0.749613796477831,1.55222022443409,0,0,0.175951124163949,0,1.39023624612799,0.696504333044333,0.205782136407943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52347938276953,1.74937841044784,0,0,0.213288250535234,0.232236671860439,0,0,0.22237804384487,0.190225626112559,0,0,0,0,0,0,0,0,0.189667900953082,0.228497025219458,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.60550589987792,1.75817529888305,0,0,0.631016438832513,0,0,0,0,0,0,0,0,2.57057053137446,0,0,0.325773918707152,0.329940245945071,0,0,0.302323556964751,0,0,0,0,0,0.356497378384721,0,0,0,2.04263763452273,0.18006109403131,0,0.428674070063185,1.06404140185364,1.96205699362278,1.31639216481697,0.608929898229199,0,0,0,0,0,0,0,0,0,2.22510362412612,0,0.206386867963223,0,0,0,0,0,0,0,0,0.316335993581135,0,0.540026704109006,0.418176592028937,0.218362563746178,0.134864346384821,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0.168956125490778,0.117357238645754,0.2604087696879,0,0,0,0,0.202725215290164,0,0.129920822977795,0,0,0,0,0.201932899896295,0,0,0,0,0.116876902181569,0,0,0,0.167884616364078,0,0,0.36630324853453,0,0,7.34177395402186,9.20650473014354,6.30185064783336,17.5290245990561,0.685082519770642,5.2877572817279,4.72515750162264,4.5032120322422,4.07828168085784,5.1776031175182,0,0,0.512200817262403,0.486213434136588,0.209613162627982,0.183843508450014,0.888986911206461,0.618105171716683,0.64183841918363,0,0.25347929989024,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0.952587382566147,0.231768651889711,0.192909220463705,0.412085900803307,0.147198920134397,0.342869252385415,1.24233064311536,0.953744759789284,0.726732083161643,0.188218760830661,0.930760686808441,1.09756783723664,0.526139422875686,0.543216455383447,0.561142271657738,0.593175090620871,0.689531376628944,0,0.154936841185966,0.771626443924566,0.749431733813838,0.935726433781634,0.429742108096597,0.382576664137687,0.441182838239031,0 | |||
|short_description=p4@Odz1 | |||
}} |
Revision as of 19:49, 14 September 2013
Short description: | p4@Odz1 |
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Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Odz1_5end |
Coexpression cluster: | MCL_coexpression_mm9:39 |
Association with transcript: | 140bp_to_ENSMUST00000125231, ENSMUST00000154433_5end |
EntrezGene: | Odz1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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CNS neuron (sensu Vertebrata) | 1.64e-19 | 23 |
neuroblast (sensu Vertebrata) | 1.64e-19 | 23 |
neuron | 2.99e-12 | 33 |
neuronal stem cell | 2.99e-12 | 33 |
neuroblast | 2.99e-12 | 33 |
electrically signaling cell | 2.99e-12 | 33 |
electrically responsive cell | 1.04e-09 | 39 |
electrically active cell | 1.04e-09 | 39 |
neural cell | 2.03e-08 | 43 |
ectodermal cell | 3.90e-08 | 44 |
neurectodermal cell | 3.90e-08 | 44 |
raphe nuclei neuron | 4.01e-07 | 3 |
neuron of the ventral spinal cord | 7.16e-07 | 3 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.