FFCP PHASE1:Hg19::chr1:31381528..31381659,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9672 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10660 | |||
|TSSclassifier=strong | |||
|UniProt=O75056 | |||
|association_with_transcript=0bp_to_ENST00000339394_5end | |||
|description=CAGE_peak_1_at_SDC3_5end | |||
|id=chr1:31381528..31381659,- | |||
|ontology_enrichment_celltype=CL:0000055!1.22e-12!180;CL:0000057!8.24e-07!75 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.23e-07,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0003528;3.69e-16;34!UBERON:0002020;3.69e-16;34!UBERON:0001893;4.50e-16;34!UBERON:0001869;5.09e-16;32!UBERON:0002791;5.17e-16;32!UBERON:0000073;1.49e-14;53!UBERON:0002616;1.49e-14;53!UBERON:0002780;3.06e-14;41!UBERON:0001890;3.06e-14;41!UBERON:0000956;8.71e-14;25!UBERON:0000203;8.71e-14;25!UBERON:0002619;7.25e-13;22!UBERON:0001950;8.21e-12;20!UBERON:0000955;1.75e-11;68!UBERON:0001017;5.19e-11;75!UBERON:0001016;1.47e-09;83!UBERON:0004732;1.12e-07;13!UBERON:0004733;2.24e-07;12!UBERON:0002028;2.24e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.54e-30,104;UBERON:0003075,1.07e-28,82;UBERON:0007284,1.07e-28,82;UBERON:0000119,1.84e-28,309;UBERON:0000483,1.71e-27,306;UBERON:0001049,2.21e-27,56;UBERON:0005068,2.21e-27,56;UBERON:0006241,2.21e-27,56;UBERON:0007135,2.21e-27,56;UBERON:0001017,6.17e-27,81;UBERON:0010314,1.33e-26,132;UBERON:0004121,2.13e-26,171;UBERON:0000924,2.13e-26,171;UBERON:0006601,2.13e-26,171;UBERON:0004111,1.32e-25,240;UBERON:0000025,1.71e-25,192;UBERON:0000073,1.95e-25,53;UBERON:0002616,1.95e-25,53;UBERON:0002346,2.00e-25,86;UBERON:0000955,3.24e-24,68;UBERON:0006238,3.24e-24,68;UBERON:0001016,5.14e-23,89;UBERON:0003056,1.80e-19,61;UBERON:0002780,2.49e-19,41;UBERON:0001890,2.49e-19,41;UBERON:0003080,2.49e-19,41;UBERON:0006240,2.49e-19,41;UBERON:0003528,8.44e-19,34;UBERON:0002020,8.44e-19,34;UBERON:0001893,1.18e-18,34;UBERON:0001869,1.20e-17,32;UBERON:0002791,1.48e-17,32;UBERON:0005423,1.73e-17,581;UBERON:0000922,2.51e-17,592;UBERON:0007023,3.02e-16,114;UBERON:0002050,3.20e-15,564;UBERON:0000923,3.21e-15,560;UBERON:0010316,3.21e-15,560;UBERON:0005291,3.21e-15,560;UBERON:0006598,3.21e-15,560;UBERON:0010317,3.21e-15,560;UBERON:0002532,3.21e-15,560;UBERON:0011216,9.22e-15,223;UBERON:0000956,8.71e-14,25;UBERON:0000203,8.71e-14,25;UBERON:0002619,7.18e-13,22;UBERON:0001950,8.10e-12,20;UBERON:0003076,3.02e-09,15;UBERON:0003057,3.02e-09,15;UBERON:0004732,1.09e-07,13;UBERON:0003914,1.89e-07,117;UBERON:0004733,2.21e-07,12;UBERON:0002028,2.21e-07,12;UBERON:0007277,2.21e-07,12;UBERON:0004872,3.06e-07,83;UBERON:0003103,5.23e-07,68 | |||
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| |||
|short_description=p1@SDC3 | |||
}} |
Revision as of 17:31, 10 January 2014
Short description: | p1@SDC3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SDC3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000339394_5end |
EntrezGene: | SDC3 |
HGNC: | 10660 |
UniProt: | O75056 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.23e-07 | 76 |