FFCP PHASE1:Hg19::chr12:15936645..15936650,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport= | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=not | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|description=CAGE_peak_at_chr12:15936645..15936650,- | |||
|id=chr12:15936645..15936650,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0002590;7.17e-09;3!CL:0000594;8.72e-09;3!CL:0000680;5.23e-08;7!CL:0000136;2.19e-07;13!CL:0000319;5.43e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002590,4.86e-09,3;CL:0000594,1.50e-08,3;CL:0000319,5.14e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;5.43e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;5.43e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,5.14e-07,1 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0005284;4.20e-11;5!UBERON:0006947;8.72e-09;3!UBERON:0004054;8.72e-09;3!UBERON:0002134;1.97e-07;1!UBERON:0001301;1.97e-07;1!UBERON:0005208;1.97e-07;1!UBERON:0004145;1.97e-07;1!UBERON:0005946;1.97e-07;1!UBERON:0005965;1.97e-07;1!UBERON:0002078;1.97e-07;1!UBERON:0001000;5.43e-07;1!UBERON:0000941;5.43e-07;1!UBERON:0001785;5.43e-07;1!UBERON:0002464;5.43e-07;1!UBERON:0004904;5.43e-07;1!UBERON:0001021;5.43e-07;1!UBERON:0005352;5.43e-07;1!UBERON:0005904;8.67e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,2.34e-11,5;UBERON:0006947,5.92e-09,3;UBERON:0004054,5.92e-09,3;UBERON:0002134,2.10e-07,1;UBERON:0005208,2.10e-07,1;UBERON:0005946,2.10e-07,1;UBERON:0005965,2.10e-07,1;UBERON:0002078,2.10e-07,1;UBERON:0001301,2.23e-07,1;UBERON:0001000,2.67e-07,1;UBERON:0005352,2.67e-07,1;UBERON:0000941,5.78e-07,1;UBERON:0001785,5.78e-07,1;UBERON:0002464,5.78e-07,1;UBERON:0004904,5.78e-07,1;UBERON:0001021,5.78e-07,1;UBERON:0003902,5.78e-07,1;UBERON:0005425,5.78e-07,1;UBERON:0005904,6.51e-07,4 | |||
|phase1_expression=0.54503513781167,0,0.704772020479856,0,0,0,0,0,0,0,0,0,0,0,0.994192127183747,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0.684372125364421,0.251085279189606,0.152826811495903,0.246301768349837,0.157421562627358,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0.256160706529101,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0.199463657621632,0,0,0.56738522469114,0,0,0,0.217188844705117,0,0,0,0,0.212604299965044,0,0.112328631146495,0,0,0.285012743741249,0.59675003159727,0.365328307529268,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0,0,0,0,0,0,0.294605907474837,0,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0,0,0,0,0,0.267440195783507,0,2.43806866313962,0,0,0,0,0,0,0,0.850813354476611,0,0.43917392846563,0.327447688744282,0,0,0,0.174129737299267,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0.267899184852239,0,0.337834441449967,0,0,0,0,0,0,0.496971951695318,0.25326102332916,0.397227542439656,0.573673241497627,0,0,0,0,0.622422070799533,0.942974704487816,0.490385709340376,1.66493170409425,0,0,0,0,0,0.352303495931295,0.323745888736263,0.280901613404497,0.816616685019573,0.61417158655884,0,0,0,0,0,0.336672227908132,0.250237039743928,0.277064115484183,0,0.30648779579902,0,0,0.179389635688862,0.213557388818567,0,0,0.103052529238439,0.257640540045629,0.18611685633159,0.506328996723799,0.0974370051611986,1.00973509697646,0.368199594569197,0,0.355009592516614,0.201504196455281,0.67824236924195,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.368965315629341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0.0895585227028483,0,0,0.492663237895943,0,0,0.144119953416961,0,0.063497894292169,0,0,0,0.102827492703324,0,0,0.560655421726804,0.43596006883328,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0.532844358032199,0.142977993658148,0,0,0,0.355391948742546,0,0.301439377059586,0,0,0,0,0,0,0,0,1.44781306667579,0.821905290201534,0.537182889719687,0,0.197030760201927,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0.271265023699736,0.207970861530807,0,0.315404830067869,0.35142424497814,0,0,0,0,0.184369168541703,0.173767228936166,0,0.343143423810856,0.206768026122887,0.215714200818617,0,0,0,0,0.248107807818777,0.306923946576125,0.280660094433074,0.128139149255701,0,0.321707842287215,0,0.154209693802656,0.177561725313127,0.0821271560138091,0,0.116210378459959,0.362578348774867,0,0,0.114814448164607,0.546273504020151,0.131124414959424,0,0,0,0,0.105551628892876,0,0,0,0,0.270946437543853,0,0,0,0,0,0,0,0,0,0.309123034943167,0,0.330037999682352,0,0,0,0.193341436584244,0.462145851343933,0.614014698904518,0.551346289938122,2.0409846524972,1.0151168573996,0.596586391912706,0.0890320356467374,0,0.192190067365106,0.382838137483752,0,0,0.62962469366128,0,0,0,0,0,0,4.83805880167568,1.89827654831236,0.38126038784765,0,0.855877976067841,0,0,1.2591072030832,0.823611089208164,0.353437207037059,0,0,0,0,0,0,0.136499911407986,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0.354761064070598,0,0.329294892959902,0,0,0,0,0,0.659006605437454,0,0,0,0,0,0.764637207142375,0,0,0,0,0,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343505344755765,0,0,0,0.19538809540204,0,0,0.270455678475983,0,0,0.18714054040822,0.586032717087576,0,0,0,0.23874448473769,0,0,0,0.422008249231538,0.111308705022906,0,0.63337622438398,0.796991953004279,0.276283915531148,0.251932747854276,2.0453736500431,0.246169610922139,0,0.718946809178615,0.716084698702437,0.511572370226872,0.197286811273867,0,0,0,0.0927680981618513,0,0.260427761085233,0.349839999984783,0,0,0,0,0,0.291604613383254,0,0,0.120596438625408,0,0.331737779793674,0,0.219385397153973,0,0.139423744278603,0.769502585037971,0,0,0.448788222048861,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0.421996129056054,0.326465616318295,0,0,0.995261931078505,0.353830258013357,1.22206028986725,0,0.123563938946503,0,0.067401132980677,0.802577647298789,0,0,0.391329237864179,0,1.97292201424695,2.41981432097328,0.30607276163049,0.884612114798832,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0.34823682632161,2.09672001890436,0,0,0,0,0.0969890164884194,0,0.451961481561065,0.411125773940253,0,0.189932387867636,0.195551382734803,0.160317640503067,0.85381197895741,0,0.864542502924636,0,0.514784993585894,0.14405479798815,0,0,0,0.209205692624666,0.509991088181609,0.288950589901519,0,0.410716136675979,0,0.429765441419957,0,0.837847203816763,0.687481272035051,2.15361907373044,0.199679000498991,0,0.223171457441873,0.671834724867263,0.360299883542404,0,0.157566364614447,0.247247575143499,0.404421263125109,0.590564889088493,0.0846733320657845,0,0,0,0,0.415440338029185,0,0,0.242998226632099,0,0.157611414598396,0.157363764404994,1.47840471127169,0.179287339332845,0,0.714695326373367,0,0,0,0.864221491201268,0,0,0.246277562248017,0.170388021785422,0.113312091520126,0.293104467356165,0,0.387848869084652,0.52893040697076,0.684347351537318,1.40963004463334,0.106787412567695,0.628817220398664,0.828478110694391,0,0,0,0,2.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| |||
|short_description=p@chr12:15936645..15936650,- | |||
}} |
Revision as of 12:28, 11 January 2014
Short description: | p@chr12:15936645..15936650, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | No |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:15936645..15936650, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the brain vasculature | 4.86e-09 | 3 |
skeletal muscle satellite cell | 1.50e-08 | 3 |
mucus secreting cell | 5.14e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 2.34e-11 | 5 |
male genital duct | 5.92e-09 | 3 |
internal male genitalia | 5.92e-09 | 3 |
tricuspid valve | 2.10e-07 | 1 |
right atrium valve | 2.10e-07 | 1 |
outflow tract of atrium | 2.10e-07 | 1 |
outflow part of right atrium | 2.10e-07 | 1 |
right cardiac atrium | 2.10e-07 | 1 |
epididymis | 2.23e-07 | 1 |
vas deferens | 2.67e-07 | 1 |
spermatic cord | 2.67e-07 | 1 |
cranial nerve II | 5.78e-07 | 1 |
cranial nerve | 5.78e-07 | 1 |
nerve trunk | 5.78e-07 | 1 |
nerve connecting eye with brain | 5.78e-07 | 1 |
nerve | 5.78e-07 | 1 |
retinal neural layer | 5.78e-07 | 1 |
presumptive neural retina | 5.78e-07 | 1 |
duct of male reproductive system | 6.51e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 5.14e-07 | 1 |