FFCP PHASE1:Hg19::chr4:90758039..90758050,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6622 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11138 | |||
|TSSclassifier=strong | |||
|UniProt=P37840 | |||
|association_with_transcript=76bp_to_ENST00000420646,NM_001146054,NM_007308,uc003hso.2,uc003hsq.2_5end | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_6_at_SNCA_5end | |||
|id=chr4:90758039..90758050,- | |||
|ontology_enrichment_celltype=CL:0002139!1.02e-09!24;CL:0000115!5.63e-07!35 | |||
|ontology_enrichment_celltype_v019=CL:0000307;6.35e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,6.72e-08,3;CL:0000069,6.72e-08,3;CL:0000307,6.72e-08,3;CL:0000377,6.72e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000377;6.35e-08;3!UBERON:0006241;6.35e-08;3!UBERON:0003057;6.35e-08;3!UBERON:0006601;7.21e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.27e-26!57;UBERON:0005068!1.27e-26!57;UBERON:0006241!1.27e-26!57;UBERON:0007135!1.27e-26!57;UBERON:0007023!1.58e-24!115;UBERON:0001893!8.10e-23!34;UBERON:0002780!1.39e-22!41;UBERON:0001890!1.39e-22!41;UBERON:0006240!1.39e-22!41;UBERON:0002020!1.61e-22!34;UBERON:0003528!1.61e-22!34;UBERON:0002791!7.15e-22!33;UBERON:0003080!1.02e-21!42;UBERON:0001869!1.82e-21!32;UBERON:0002616!8.71e-21!59;UBERON:0005743!2.36e-20!86;UBERON:0001017!3.59e-20!82;UBERON:0003075!5.94e-20!86;UBERON:0007284!5.94e-20!86;UBERON:0000955!2.31e-19!69;UBERON:0006238!2.31e-19!69;UBERON:0000073!3.24e-19!94;UBERON:0001016!3.24e-19!94;UBERON:0002346!3.48e-18!90;UBERON:0002619!6.06e-18!22;UBERON:0003056!9.14e-17!61;UBERON:0000033!3.44e-16!123;UBERON:0000956!3.52e-16!25;UBERON:0000203!3.52e-16!25;UBERON:0001950!4.16e-16!20;UBERON:0004111!1.99e-15!241;UBERON:0000153!5.15e-15!129;UBERON:0007811!5.15e-15!129;UBERON:0004121!2.84e-14!169;UBERON:0000924!2.23e-13!173;UBERON:0006601!2.23e-13!173;UBERON:0000025!2.53e-12!194;UBERON:0000477!4.42e-12!286;UBERON:0000483!1.19e-11!309;UBERON:0000119!3.18e-11!312;UBERON:0002420!1.38e-08!9;UBERON:0007245!1.38e-08!9;UBERON:0010009!1.38e-08!9;UBERON:0010011!1.38e-08!9;UBERON:0000454!1.38e-08!9;UBERON:0000923!1.48e-08!604;UBERON:0005291!1.48e-08!604;UBERON:0006598!1.48e-08!604;UBERON:0002532!1.48e-08!604;UBERON:0002050!1.85e-08!605;UBERON:0005423!1.85e-08!605;UBERON:0000467!2.14e-08!625;UBERON:0000480!2.67e-08!626;UBERON:0000922!4.14e-08!612;UBERON:0002308!7.72e-08!9;UBERON:0000125!7.72e-08!9;UBERON:0000468!1.01e-07!659;UBERON:0000200!2.71e-07!6;UBERON:0000178!2.78e-07!15;UBERON:0000179!2.78e-07!15;UBERON:0000463!2.78e-07!15;UBERON:0000475!9.88e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.23e-42;22!UBERON:0001950;4.37e-38;20!UBERON:0000956;4.88e-37;25!UBERON:0000203;4.88e-37;25!UBERON:0001869;5.75e-33;32!UBERON:0002791;4.66e-32;32!UBERON:0001893;8.07e-31;34!UBERON:0003528;2.03e-30;34!UBERON:0002020;2.03e-30;34!UBERON:0002780;1.61e-23;41!UBERON:0001890;1.61e-23;41!UBERON:0000200;2.31e-16;6!UBERON:0000073;6.75e-16;53!UBERON:0002616;6.75e-16;53!UBERON:0000178;1.03e-14;15!UBERON:0000179;1.03e-14;15!UBERON:0000463;1.03e-14;15!UBERON:0000349;9.06e-14;5!UBERON:0001872;5.28e-13;5!UBERON:0001017;1.65e-12;75!UBERON:0001016;2.10e-11;83!UBERON:0000955;2.65e-11;68!UBERON:0001871;3.77e-10;6!UBERON:0001870;4.62e-09;3!UBERON:0002021;5.68e-09;5!UBERON:0007023;3.89e-08;114!UBERON:0002240;6.35e-08;3!UBERON:0005174;6.35e-08;3!UBERON:0001137;6.35e-08;3!UBERON:0002420;2.99e-07;9!UBERON:0007245;2.99e-07;9!UBERON:0010009;2.99e-07;9!UBERON:0010011;2.99e-07;9!UBERON:0000454;2.99e-07;9!UBERON:0001876;9.16e-07;2!UBERON:0002771;9.95e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,1.98e-42,22;UBERON:0001893,5.31e-38,34;UBERON:0001950,1.09e-37,20;UBERON:0001869,1.68e-37,32;UBERON:0002791,4.57e-37,32;UBERON:0000956,7.37e-37,25;UBERON:0000203,7.37e-37,25;UBERON:0003528,1.45e-34,34;UBERON:0002020,1.45e-34,34;UBERON:0002780,4.27e-33,41;UBERON:0001890,4.27e-33,41;UBERON:0003080,4.27e-33,41;UBERON:0006240,4.27e-33,41;UBERON:0001049,4.33e-31,56;UBERON:0005068,4.33e-31,56;UBERON:0006241,4.33e-31,56;UBERON:0007135,4.33e-31,56;UBERON:0007023,8.73e-28,114;UBERON:0000073,2.65e-26,53;UBERON:0002616,2.65e-26,53;UBERON:0001017,8.15e-26,81;UBERON:0000955,4.09e-24,68;UBERON:0006238,4.09e-24,68;UBERON:0001016,5.77e-24,89;UBERON:0003056,6.18e-22,61;UBERON:0010371,5.58e-21,104;UBERON:0003075,2.48e-20,82;UBERON:0007284,2.48e-20,82;UBERON:0002346,5.07e-19,86;UBERON:0000200,2.64e-16,6;UBERON:0000178,1.05e-14,15;UBERON:0000179,1.05e-14,15;UBERON:0000463,1.05e-14,15;UBERON:0004121,2.11e-14,171;UBERON:0000924,2.11e-14,171;UBERON:0006601,2.11e-14,171;UBERON:0000349,5.45e-14,5;UBERON:0001872,1.01e-12,5;UBERON:0011216,1.41e-12,223;UBERON:0010314,1.37e-11,132;UBERON:0001871,3.84e-10,6;UBERON:0001870,5.18e-09,3;UBERON:0002021,7.04e-09,5;UBERON:0000025,5.60e-08,192;UBERON:0002240,6.08e-08,3;UBERON:0005174,6.08e-08,3;UBERON:0001137,6.08e-08,3;UBERON:0004111,1.90e-07,240;UBERON:0002420,4.19e-07,9;UBERON:0007245,4.19e-07,9;UBERON:0010009,4.19e-07,9;UBERON:0010011,4.19e-07,9;UBERON:0000454,4.19e-07,9;UBERON:0001876,8.83e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.247532705920093,0,0,0,0,0,0.123121058076788,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0.344745680736619,0,0,0.188242339542605,0.272906150057846,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0.526768169550154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189069634328136,0,0.175669571386252,0.851363990735132,0,0,0,0,0,0,0,0,0.993812036833525,0.860234595106124,0,1.13061588384802,0.419499436209906,0.275118041940067,0.208994966536811,0.516833518338658,0.71153252537342,0.33472061276467,0.805658634218294,0.760272105718513,0.732186172644509,1.10298924103761,0,0.446498641420399,0.22452937262617,0.112611480483322,0,0,0.549605231791222,0,0,0,0,0,0,0,0,0,1.06748995729705,0.49333509683432,0,0.134710672069688,0.163461903113459,0,0,0,0,0,0.448346041655403,0,0,0,0.204154171254893,0.122834317311768,0,0,0,0,0,0,0,0.277064115484183,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.57978255948989,0.818238361772504,0.860413786167011,0,0,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.439001141634502,0,0.301586917234893,0.185176890317059,0,0,0,0.463721619900307,0.117408694235822,1.01056513432752,1.85194205030644,0.761016608938393,0,0,0.246217006087397,0.468008530278475,0.445893486866185,0,0.503946384596579,0.708875486211932,1.70161193135412,0,1.15014803749563,0,0,0,0,0,1.33345578013555,0.763976851116555,1.17217447210047,0,0.411309970813294,3.00343057843917,1.14330573052231,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74306691720059,0.499864955910285,0,0.502257091432126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.167516265334349,0,0,2.99161459204025,0.414415513436035,0.24538298343828,0,0,0,0,0,0,0,0,0,0,0,0.260650843404249,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40354529212299,0,0.229628896329213,0,0.262248829918848,0.451199612907412,0.231046011313244,0,1.46139224653261,0.211103257785751,1.13733384070897,0.340187410553031,0.215915916102139,0,0,0,0,0,0,1.31555925987561,2.61435451024901,1.28225062558195,0,0,0,0,0,1.14853107599234,0.650060246036521,0,0,0,0,0,0,0,0,0,0.661139661443912,0.384380134730212,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0.55597265731176,0.143124886741991,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0.471249609382746,0.202182481573316,0,0,0,0,0,0,2.54529777516683,0,0,0,0.438450885253763,0,0,0.811641507850816,0.30982349809975,0,0,0.0982490410131212,0.7133421029625,0,0,0,0,0,1.63577591633371,1.34060455107157,1.08890984861323,0,0.86101074534246,0,0.886860307073351,1.37834040124176,35.0138850370197,42.0550463928306,24.494829048489,11.4351252219739,11.1067813733272,32.4236655596359,46.982735039716,29.345631522888,1.6023610669121,0,0.490080431962063,0,0,0,0,0,0,0.423347165447766,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0,0,0,0,0.284136146806413,0,0,0,5.96488588659779,4.07941307590487,0,0,0,0,0,0,0,0,0,0,0.179021174675609,0,0.0986434056369336,11.974154617347,0,1.93866549219044,3.9890282209596,1.99613798001194,0,0,0,3.07242310370849,0,0,0,0.291604613383254,0,0.885741385813839,0.60298219312704,0,0.331737779793674,0.295547618953547,8.7754158861589,0,0.278847488557207,0.153900517007594,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0.167821586975843,0,0,0,0,0,0,0,0.176915129006678,0,0,0,0,0.606610196826093,0.802577647298789,0.702793337176017,0,0,0,0,0,0.30607276163049,0.063186579628488,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0.0821154570532092,0.0969890164884194,0,0,0,0.19871461170299,5.6346608400732,0.195551382734803,0,0,0,0,10.1937570587665,0,0,0.49701014226173,0,0,0,0,0,1.20084057741958,0.684526894459965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492137407573744,0,3.97614844904652,1.77064427945048,0,0,0.415440338029185,0.674921674654501,0,6.80395034569876,0,0.157611414598396,0.419636705079985,0.105600336519406,1.97216073266129,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0.517131825446202,0.79339561045614,0,0,0,0.314408610199332,0.414239055347196,0,0,0,0.638341257770182,0,0,0,0,0.628216385000937,3.54427271986794,6.34536577490208,2.003054891304,0.573409195690071,0.443716206147409,0.683060432355218,0.138348634936231,0,1.66814029295813,2.85465333544967,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521745061811734,0,0,0,0,0.429642228169954,0,0,0,0,0,0,0.963099152036517,0,0,0.453411851024545,0,0,0.179088841081487,0,0,0.176689145945881,0,0,0.256241518587947,0,0.303859956177382,3.594719339945,0,0,0.327130788511688,0,0,0,0,0,0,0,0,0.279759015438889,0.622077260032973,0,0,0.157265941855896,0,0,0,0,0,0,0,1.60114149657094,0,0,3.46837815520881,0,1.11743701340006,11.691632761723,3.78107544332577,2.83544735103293,5.49017195148294,0,0.392590874004102,0,0,0,0,0,0,0.0752103283492573,0,0,0,0.163771917510097,0,3.91717990786689,3.12431239445539,1.2401207790071,2.09272173639893,1.09394961803644,0,0,0,1.53314913167514,0.535701835878287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| |||
|short_description=p6@SNCA | |||
}} |
Revision as of 02:16, 22 January 2014
Short description: | p6@SNCA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SNCA_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | 76bp_to_ENST00000420646, NM_001146054, NM_007308, uc003hso.2, uc003hsq.2_5end |
EntrezGene: | SNCA |
HGNC: | 11138 |
UniProt: | P37840 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 6.72e-08 | 3 |
branched duct epithelial cell | 6.72e-08 | 3 |
tracheal epithelial cell | 6.72e-08 | 3 |
tracheoblast | 6.72e-08 | 3 |