FFCP PHASE1:Hg19::chr10:124255776..124255777,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:124255776..124255777,+ | |||
|description=CAGE_peak_at_chr10:124255776..124255777,+ | |description=CAGE_peak_at_chr10:124255776..124255777,+ | ||
|id=chr10:124255776..124255777,+ | |id=chr10:124255776..124255777,+ | ||
|ontology_enrichment_celltype=CL:0000057!1.45e-08!75 | |ontology_enrichment_celltype=CL:0000057!1.45e-08!75 | ||
|ontology_enrichment_celltype_v019=CL:0000680;4.68e-09;7!CL:0002623;2.61e-07;3!CL:0000188;7.56e-07;9!CL:0000622;8.16e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002623,2.79e-07,3;CL:0000188,4.49e-07,9;CL:0000622,5.59e-07,5 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002616!1.30e-15!59;UBERON:0001049!6.09e-15!57;UBERON:0005068!6.09e-15!57;UBERON:0006241!6.09e-15!57;UBERON:0007135!6.09e-15!57;UBERON:0000955!1.26e-14!69;UBERON:0006238!1.26e-14!69;UBERON:0001017!4.53e-14!82;UBERON:0003080!3.19e-13!42;UBERON:0005743!4.21e-13!86;UBERON:0000468!4.60e-13!659;UBERON:0000475!5.08e-13!365;UBERON:0002780!7.13e-13!41;UBERON:0001890!7.13e-13!41;UBERON:0006240!7.13e-13!41;UBERON:0000033!8.04e-13!123;UBERON:0000467!7.13e-12!625;UBERON:0001893!7.50e-12!34;UBERON:0000153!9.00e-12!129;UBERON:0007811!9.00e-12!129;UBERON:0000480!1.03e-11!626;UBERON:0000073!1.77e-11!94;UBERON:0001016!1.77e-11!94;UBERON:0002791!3.09e-11!33;UBERON:0000062!3.24e-11!511;UBERON:0002020!5.08e-11!34;UBERON:0003528!5.08e-11!34;UBERON:0001869!1.64e-10!32;UBERON:0004121!1.79e-10!169;UBERON:0000924!7.86e-10!173;UBERON:0006601!7.86e-10!173;UBERON:0000956!2.21e-09!25;UBERON:0000203!2.21e-09!25;UBERON:0003075!6.68e-09!86;UBERON:0007284!6.68e-09!86;UBERON:0007023!6.91e-09!115;UBERON:0001950!1.41e-08!20;UBERON:0002619!2.60e-08!22;UBERON:0002346!4.87e-08!90;UBERON:0003056!8.92e-08!61;UBERON:0000923!2.11e-07!604;UBERON:0005291!2.11e-07!604;UBERON:0006598!2.11e-07!604;UBERON:0002532!2.11e-07!604;UBERON:0002050!2.81e-07!605;UBERON:0005423!2.81e-07!605;UBERON:0000922!2.98e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.72e-16;34!UBERON:0002619;1.22e-15;22!UBERON:0000956;2.11e-15;25!UBERON:0000203;2.11e-15;25!UBERON:0002780;2.33e-15;41!UBERON:0001890;2.33e-15;41!UBERON:0001950;2.41e-15;20!UBERON:0001869;1.54e-14;32!UBERON:0002791;3.50e-14;32!UBERON:0003528;4.91e-14;34!UBERON:0002020;4.91e-14;34!UBERON:0000073;5.71e-14;53!UBERON:0002616;5.71e-14;53!UBERON:0001134;1.34e-09;16!UBERON:0002036;1.34e-09;16!UBERON:0001872;3.65e-08;5!UBERON:0002298;1.88e-07;6!UBERON:0000955;2.97e-07;68!UBERON:0001017;7.77e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,9.00e-22,53;UBERON:0002616,9.00e-22,53;UBERON:0002780,2.98e-20,41;UBERON:0001890,2.98e-20,41;UBERON:0003080,2.98e-20,41;UBERON:0006240,2.98e-20,41;UBERON:0001049,3.77e-20,56;UBERON:0005068,3.77e-20,56;UBERON:0006241,3.77e-20,56;UBERON:0007135,3.77e-20,56;UBERON:0001893,1.70e-19,34;UBERON:0000955,7.44e-19,68;UBERON:0006238,7.44e-19,68;UBERON:0003528,3.33e-17,34;UBERON:0002020,3.33e-17,34;UBERON:0002791,1.01e-16,32;UBERON:0001869,1.21e-16,32;UBERON:0002619,7.41e-16,22;UBERON:0001950,1.11e-15,20;UBERON:0000956,1.55e-15,25;UBERON:0000203,1.55e-15,25;UBERON:0001017,2.07e-14,81;UBERON:0001016,2.25e-14,89;UBERON:0003056,1.00e-12,61;UBERON:0003075,2.61e-12,82;UBERON:0007284,2.61e-12,82;UBERON:0010371,5.21e-12,104;UBERON:0002346,2.34e-11,86;UBERON:0004121,2.00e-09,171;UBERON:0000924,2.00e-09,171;UBERON:0006601,2.00e-09,171;UBERON:0001872,1.51e-08,5;UBERON:0002298,2.65e-07,6;UBERON:0010314,5.55e-07,132 | |||
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| ||
|short_description=p@chr10:124255776..124255777,+ | |short_description=p@chr10:124255776..124255777,+ | ||
}} | }} |
Latest revision as of 11:13, 23 July 2015
Short description: | p@chr10:124255776..124255777, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:124255776..124255777, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
acinar cell of salivary gland | 2.79e-07 | 3 |
cell of skeletal muscle | 4.49e-07 | 9 |
acinar cell | 5.59e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 9.00e-22 | 53 |
regional part of brain | 9.00e-22 | 53 |
regional part of forebrain | 2.98e-20 | 41 |
forebrain | 2.98e-20 | 41 |
anterior neural tube | 2.98e-20 | 41 |
future forebrain | 2.98e-20 | 41 |
neural tube | 3.77e-20 | 56 |
neural rod | 3.77e-20 | 56 |
future spinal cord | 3.77e-20 | 56 |
neural keel | 3.77e-20 | 56 |
telencephalon | 1.70e-19 | 34 |
brain | 7.44e-19 | 68 |
future brain | 7.44e-19 | 68 |
brain grey matter | 3.33e-17 | 34 |
gray matter | 3.33e-17 | 34 |
regional part of telencephalon | 1.01e-16 | 32 |
cerebral hemisphere | 1.21e-16 | 32 |
regional part of cerebral cortex | 7.41e-16 | 22 |
neocortex | 1.11e-15 | 20 |
cerebral cortex | 1.55e-15 | 25 |
pallium | 1.55e-15 | 25 |
central nervous system | 2.07e-14 | 81 |
nervous system | 2.25e-14 | 89 |
pre-chordal neural plate | 1.00e-12 | 61 |
neural plate | 2.61e-12 | 82 |
presumptive neural plate | 2.61e-12 | 82 |
ecto-epithelium | 5.21e-12 | 104 |
neurectoderm | 2.34e-11 | 86 |
ectoderm-derived structure | 2.00e-09 | 171 |
ectoderm | 2.00e-09 | 171 |
presumptive ectoderm | 2.00e-09 | 171 |
parietal lobe | 1.51e-08 | 5 |
brainstem | 2.65e-07 | 6 |
structure with developmental contribution from neural crest | 5.55e-07 | 132 |