FFCP PHASE1:Hg19::chr10:20139221..20139225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:20139221..20139225,+ | |||
|description=CAGE_peak_at_chr10:20139221..20139225,+ | |description=CAGE_peak_at_chr10:20139221..20139225,+ | ||
|id=chr10:20139221..20139225,+ | |id=chr10:20139221..20139225,+ | ||
|ontology_enrichment_celltype=CL:0000473;2.86e-38;39!CL:0000234;2.86e-38;39!CL:0000860;1.19e-37;33!CL:0002057;1.19e-37;33!CL:0000576;2.61e-35;48!CL:0000766;6.80e-25;69!CL:0000763;8.21e-12;100!CL:0002393;2.36e-09;6!CL:0002397;2.36e-09;6!CL:0000094;2.96e-09;8!CL:0000235;1.60e-08;6!CL:0000738;5.84e-08;136!CL:0002087;9.45e-08;104 | |ontology_enrichment_celltype=CL:0000766!6.56e-32!76;CL:0002057!1.26e-31!42;CL:0002009!1.36e-31!65;CL:0002194!1.19e-30!63;CL:0000576!1.19e-30!63;CL:0000040!1.19e-30!63;CL:0000559!1.19e-30!63;CL:0000860!3.65e-28!45;CL:0000557!1.19e-27!71;CL:0000839!5.35e-26!70;CL:0000763!1.60e-21!112;CL:0000049!1.60e-21!112;CL:0000738!3.41e-14!140;CL:0002087!9.09e-13!119;CL:0000037!3.68e-11!172;CL:0000566!3.68e-11!172;CL:0002031!7.22e-11!124;CL:0002032!2.53e-10!165;CL:0000837!2.53e-10!165;CL:0000988!3.54e-09!182;CL:0002393!1.55e-08!9;CL:0002397!1.55e-08!9 | ||
| | |ontology_enrichment_celltype_v019=CL:0000473;2.86e-38;39!CL:0000234;2.86e-38;39!CL:0000860;1.19e-37;33!CL:0002057;1.19e-37;33!CL:0000576;2.61e-35;48!CL:0000766;6.80e-25;69!CL:0000763;8.21e-12;100!CL:0002393;2.36e-09;6!CL:0002397;2.36e-09;6!CL:0000094;2.96e-09;8!CL:0000235;1.60e-08;6!CL:0000738;5.84e-08;136!CL:0002087;9.45e-08;104 | ||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.37e-61,48;CL:0000234,2.37e-61,48;CL:0000766,3.64e-60,72;CL:0002194,2.42e-57,59;CL:0000576,2.42e-57,59;CL:0000040,2.42e-57,59;CL:0000559,2.42e-57,59;CL:0002009,4.87e-55,61;CL:0000860,3.97e-54,42;CL:0002057,3.97e-54,42;CL:0000839,6.93e-50,66;CL:0000557,6.02e-49,67;CL:0000763,2.17e-38,108;CL:0000049,2.17e-38,108;CL:0000738,6.57e-29,136;CL:0002087,3.42e-27,115;CL:0000037,1.48e-22,168;CL:0002031,1.27e-21,120;CL:0002032,7.57e-21,161;CL:0000837,7.57e-21,161;CL:0000988,1.24e-20,177;CL:0002393,2.14e-14,9;CL:0002397,2.14e-14,9;CL:0000094,3.31e-09,8;CL:0000235,2.19e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;2.22e-39;42!CL:0000049;2.95e-13;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_uberon=UBERON:0002420;3.81e-10;9!UBERON:0007245;3.81e-10;9!UBERON:0010009;3.81e-10;9!UBERON:0010011;3.81e-10;9!UBERON:0000454;3.81e-10;9!UBERON:0002780;4.78e-09;41!UBERON:0001890;4.78e-09;41!UBERON:0002784;2.87e-08;4!UBERON:0000125;1.45e-07;9!UBERON:0002308;1.45e-07;9!UBERON:0000073;1.51e-07;53!UBERON:0002616;1.51e-07;53!UBERON:0002791;2.37e-07;32!UBERON:0003528;3.20e-07;34!UBERON:0002020;3.20e-07;34!UBERON:0009663;5.20e-07;7!UBERON:0001893;5.82e-07;34 | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0002420;3.81e-10;9!UBERON:0007245;3.81e-10;9!UBERON:0010009;3.81e-10;9!UBERON:0010011;3.81e-10;9!UBERON:0000454;3.81e-10;9!UBERON:0002780;4.78e-09;41!UBERON:0001890;4.78e-09;41!UBERON:0002784;2.87e-08;4!UBERON:0000125;1.45e-07;9!UBERON:0002308;1.45e-07;9!UBERON:0000073;1.51e-07;53!UBERON:0002616;1.51e-07;53!UBERON:0002791;2.37e-07;32!UBERON:0003528;3.20e-07;34!UBERON:0002020;3.20e-07;34!UBERON:0009663;5.20e-07;7!UBERON:0001893;5.82e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.32e-41,76;UBERON:0001474,1.33e-37,82;UBERON:0002390,3.01e-36,98;UBERON:0003061,3.01e-36,98;UBERON:0004765,4.20e-33,90;UBERON:0002405,1.29e-31,93;UBERON:0002193,1.38e-31,108;UBERON:0001434,1.70e-28,100;UBERON:0003081,2.10e-14,203;UBERON:0002204,8.78e-14,167;UBERON:0001049,7.20e-12,56;UBERON:0005068,7.20e-12,56;UBERON:0006241,7.20e-12,56;UBERON:0007135,7.20e-12,56;UBERON:0002780,1.03e-11,41;UBERON:0001890,1.03e-11,41;UBERON:0003080,1.03e-11,41;UBERON:0006240,1.03e-11,41;UBERON:0000073,1.70e-11,53;UBERON:0002616,1.70e-11,53;UBERON:0002420,2.89e-10,9;UBERON:0007245,2.89e-10,9;UBERON:0010009,2.89e-10,9;UBERON:0010011,2.89e-10,9;UBERON:0000454,2.89e-10,9;UBERON:0003528,4.88e-09,34;UBERON:0002020,4.88e-09,34;UBERON:0001893,6.90e-09,34;UBERON:0002346,7.25e-09,86;UBERON:0002791,2.30e-08,32;UBERON:0002784,5.92e-08,4;UBERON:0003075,6.56e-08,82;UBERON:0007284,6.56e-08,82;UBERON:0000923,8.48e-08,560;UBERON:0010316,8.48e-08,560;UBERON:0005291,8.48e-08,560;UBERON:0006598,8.48e-08,560;UBERON:0010317,8.48e-08,560;UBERON:0002532,8.48e-08,560;UBERON:0000955,1.27e-07,68;UBERON:0006238,1.27e-07,68;UBERON:0002050,1.35e-07,564;UBERON:0000125,1.62e-07,9;UBERON:0002308,1.62e-07,9;UBERON:0001869,5.68e-07,32;UBERON:0009663,5.87e-07,7;UBERON:0000349,8.49e-07,5;UBERON:0005423,9.16e-07,581 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0.140954404095971,0,1.34088328328186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0.125542639594803,0,0,0,0,2.30297638858328,1.08371286321253,0,0,0,0,0,0.880801318004542,3.32397245119126,4.61252229181326,5.64228263861215,2.91090116511902,1.94336199611388,1.28787783817093,4.65274364094607,3.02300754951048,4.85168122375632,3.0215774797739,2.46700732813095,3.09706370895104,3.45230870786581,2.30544635876191,2.36482229888585,2.75796544589295,3.22742341791913,2.70852973188684,2.25890807451126,3.0019676506363,2.24723484445085,2.44867113896722,0.641858054152187,2.55734850319616,2.63881040149373,2.99195486432448,4.26224750532694,0.870627715885752,0,0.622822248995575,6.28121663141858,6.77927793946262,2.6062661364614,0.605399502633369,1.10483290796269,0.632924774881769,0.845021145247767,2.76385589954557,2.51590374610051,2.2465726229299,5.85689882081875,1.28580469357664,3.13514018115373,1.79025009479181,1.46131323011707,0,0,0,0.426730222566507,0,0,0,0,0,0.587237189370939,0.382273228125229,2.64342657158052,0,1.58030450865046,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0.276350017785848,0,0,0,0,0,0,0,0,0,0,0,0,0.127986611154418,0,0.473554504088034,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0.486634870302636,0.283604451492204,0.221729397462564,0.702678285545008,0.523916301990851,0,0,0.97364218096405,0.696518949197069,2.39324328933957,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,7.75560528296651,0,0,0,0,0,0.354668382198357,0,0,0,0,0.134710672069688,0,0,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0.132529768321485,0,0.207322110030741,0.252320850875628,0.72995471815166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0.122988438543114,0,0.109750285408626,0,0,0,0,0,0,0.231860809950154,0.117408694235822,0,0,0,0,0,4.92434012174795,1.63802985597466,3.71577905721821,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0.299918973546171,0,1.00451418286425,2.10833939483032,0,0,0,0.144781306667579,0.61642896765115,0,0,0.197030760201927,0.215627574859517,0.256686072559497,0.254094624222463,0,0,0,0,5.24304916763028,2.99161459204025,0.828831026872071,0,0,0,0.207970861530807,0,0.157702415033935,0,0,0,0,0,0,0,0,0,1.6541442089831,3.45142721309787,1.06727557803444,0,0,0,0.248107807818777,0.306923946576125,0,0.256278298511402,0,0.321707842287215,0,0,0.177561725313127,0,0,0,0.241718899183244,0.200506470303285,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.824328093181778,0.0915694648183434,0.247528499761764,0,0,0,0,0.154048617114644,0,0,0.429680979473094,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0.632758849437452,0.953150969619124,0,0,0,0,0.179872457583315,1.09814811894422,0.471249609382746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0,0,0,0,0,0,0,0,0.376575203107117,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.822724546172388,0,0,0.79312517629427,0,0,0.245040215981032,0,0,0,0,0,0.383010740264733,0,0.649243880549111,1.12318871245384,0,0,0,1.18504244461122,0,0.201799707191048,0.425846237690326,0,0,0,0.166849141711909,0,0,0,0.811367035427949,0,0,0,0.73254089635947,0.121360521749513,0,0,0,0,0,3.97659059106519,1.96937182974718,0,0,0,2.19172787076177,0,0,0,0,0,0,0,0,0.197286811273867,4.7896618469388,0,0.969332746095218,0.0927680981618513,0,1.5625665665114,0,0,0,0.254253650292766,0,0,0,0,0,1.5677537021303,0,0,0,0.438770794307945,0,0.41827123283581,0.692552326534174,0.341826167541004,0.922255617552241,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.442287822516696,1.22206028986725,0,0,0,1.14581926067151,3.21031058919516,0.234264445725339,0,0,0,1.18375320854817,2.41981432097328,0.61214552326098,0.947798694427319,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0.698906672968121,0,0,0,0,0.484945082442097,0.0882561266915003,0.677942222341597,0,0,0.316553979779393,0,0,0.426905989478705,0.19980960958213,0,0,0,0,0,0,0.135904206073614,0.313808538937,0,0,1.20084057741958,3.01191833562385,0,0.429765441419957,0,1.11712960508902,0.916641696046735,2.15361907373044,0,0,0,0.268733889946905,0,0,0.157566364614447,0,0.0674035438541849,0.196854963029498,0,1.59045937961861,2.31545790389679,0.321506296930038,0.412618309791701,0,0.449947783103001,0.77380195455795,0.485996453264197,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0.146552233678082,0,0.517131825446202,2.51241943311111,0,0,0.320362237703084,0.157204305099666,2.89967338743037,0.496166021811951,0,0,0,0,0.5013797880454,0,0,0,0,0.122026264901963,1.251909307065,1.72022758707021,1.77486482458964,0.372578417648301,0.138348634936231,0.499921631848426,0,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0.151230923763239,0,0.147855149989634,0.318593534327405,0.449803112163605,0.155262956876259,0,0.265841714557995,1.04349012362347,0,0,0,0,0,0,0.398095888698616,0,0.34339570518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| ||
|short_description=p@chr10:20139221..20139225,+ | |short_description=p@chr10:20139221..20139225,+ | ||
}} | }} |
Latest revision as of 12:28, 23 July 2015
Short description: | p@chr10:20139221..20139225, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:20139221..20139225, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.37e-61 | 48 |
phagocyte | 2.37e-61 | 48 |
myeloid leukocyte | 3.64e-60 | 72 |
monopoietic cell | 2.42e-57 | 59 |
monocyte | 2.42e-57 | 59 |
monoblast | 2.42e-57 | 59 |
promonocyte | 2.42e-57 | 59 |
macrophage dendritic cell progenitor | 4.87e-55 | 61 |
classical monocyte | 3.97e-54 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.97e-54 | 42 |
myeloid lineage restricted progenitor cell | 6.93e-50 | 66 |
granulocyte monocyte progenitor cell | 6.02e-49 | 67 |
myeloid cell | 2.17e-38 | 108 |
common myeloid progenitor | 2.17e-38 | 108 |
leukocyte | 6.57e-29 | 136 |
nongranular leukocyte | 3.42e-27 | 115 |
hematopoietic stem cell | 1.48e-22 | 168 |
hematopoietic lineage restricted progenitor cell | 1.27e-21 | 120 |
hematopoietic oligopotent progenitor cell | 7.57e-21 | 161 |
hematopoietic multipotent progenitor cell | 7.57e-21 | 161 |
hematopoietic cell | 1.24e-20 | 177 |
intermediate monocyte | 2.14e-14 | 9 |
CD14-positive, CD16-positive monocyte | 2.14e-14 | 9 |
granulocyte | 3.31e-09 | 8 |
macrophage | 2.19e-08 | 6 |