FFCP PHASE1:Hg19::chr17:2652750..2652762,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr17:2652750..2652762,-
|short_description=p@chr17:2652750..2652762,-
|description=CAGE_peak_at_chr17:2652750..2652762,-
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:2652750..2652762,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_at_chr17:2652750..2652762,- | |||
|id=chr17:2652750..2652762,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.57e-17;3!UBERON:0006601;1.02e-08;82 | |||
|ontology_enrichment_disease=DOID:169!5.99e-09!6 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.05e-72!57;UBERON:0005068!1.05e-72!57;UBERON:0006241!1.05e-72!57;UBERON:0007135!1.05e-72!57;UBERON:0002616!5.64e-70!59;UBERON:0000955!6.56e-65!69;UBERON:0006238!6.56e-65!69;UBERON:0002780!2.44e-61!41;UBERON:0001890!2.44e-61!41;UBERON:0006240!2.44e-61!41;UBERON:0003080!9.75e-60!42;UBERON:0000073!8.33e-59!94;UBERON:0001016!8.33e-59!94;UBERON:0001017!1.13e-56!82;UBERON:0005743!1.38e-56!86;UBERON:0001893!8.38e-55!34;UBERON:0002020!1.10e-54!34;UBERON:0003528!1.10e-54!34;UBERON:0003075!3.61e-54!86;UBERON:0007284!3.61e-54!86;UBERON:0002791!1.36e-51!33;UBERON:0002346!2.32e-51!90;UBERON:0001869!3.41e-49!32;UBERON:0003056!3.13e-45!61;UBERON:0002619!1.67e-42!22;UBERON:0007023!4.89e-41!115;UBERON:0000956!4.43e-37!25;UBERON:0000203!4.43e-37!25;UBERON:0000033!7.88e-37!123;UBERON:0001950!2.42e-36!20;UBERON:0000153!1.08e-34!129;UBERON:0007811!1.08e-34!129;UBERON:0004121!1.12e-28!169;UBERON:0000924!8.61e-28!173;UBERON:0006601!8.61e-28!173;UBERON:0002420!2.20e-19!9;UBERON:0007245!2.20e-19!9;UBERON:0010009!2.20e-19!9;UBERON:0010011!2.20e-19!9;UBERON:0000454!2.20e-19!9;UBERON:0002308!4.61e-19!9;UBERON:0000125!4.61e-19!9;UBERON:0000349!2.11e-18!5;UBERON:0004733!8.46e-18!12;UBERON:0002028!8.46e-18!12;UBERON:0007277!8.46e-18!12;UBERON:0004732!2.53e-16!13;UBERON:0001871!3.61e-16!7;UBERON:0000200!1.07e-15!6;UBERON:0000025!2.86e-15!194;UBERON:0002298!5.22e-15!8;UBERON:0002680!3.51e-14!9;UBERON:0001895!3.51e-14!9;UBERON:0010092!3.51e-14!9;UBERON:0003076!5.80e-14!15;UBERON:0003057!5.80e-14!15;UBERON:0009663!2.94e-13!7;UBERON:0002021!3.73e-12!5;UBERON:0002771!7.77e-12!3;UBERON:0000064!1.39e-11!219;UBERON:0000988!3.02e-11!3;UBERON:0006331!4.76e-11!3;UBERON:0004111!1.25e-10!241;UBERON:0000369!3.56e-09!4;UBERON:0002435!3.56e-09!4;UBERON:0000204!3.56e-09!4;UBERON:0010082!3.56e-09!4;UBERON:0000483!4.06e-09!309;UBERON:0000119!6.07e-09!312;UBERON:0000477!2.35e-08!286;UBERON:0001954!2.78e-08!2;UBERON:0003022!2.78e-08!2;UBERON:0002421!2.78e-08!2;UBERON:0002600!2.78e-08!2;UBERON:0001876!2.99e-08!2;UBERON:0001894!4.25e-08!7;UBERON:0006222!4.25e-08!7;UBERON:0002148!7.78e-08!2;UBERON:0009662!7.78e-08!2;UBERON:0001872!3.61e-07!5;UBERON:0000475!6.63e-07!365 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.28e-47;32!UBERON:0001893;5.75e-46;34!UBERON:0001950;6.08e-44;20!UBERON:0002791;1.07e-42;32!UBERON:0002619;4.78e-40;22!UBERON:0003528;2.76e-39;34!UBERON:0002020;2.76e-39;34!UBERON:0000956;2.52e-35;25!UBERON:0000203;2.52e-35;25!UBERON:0000200;2.49e-31;6!UBERON:0002780;4.98e-30;41!UBERON:0001890;4.98e-30;41!UBERON:0000073;3.93e-28;53!UBERON:0002616;3.93e-28;53!UBERON:0000955;5.86e-22;68!UBERON:0001017;1.65e-18;75!UBERON:0001870;1.48e-16;3!UBERON:0001016;3.48e-16;83!UBERON:0009663;1.24e-15;7!UBERON:0002902;1.71e-13;1!UBERON:0009899;1.71e-13;1!UBERON:0002581;4.76e-13;1!UBERON:0001882;4.76e-13;1!UBERON:0002022;4.76e-13;1!UBERON:0001874;4.76e-13;1!UBERON:0007190;4.76e-13;1!UBERON:0005403;4.76e-13;1!UBERON:0000369;1.16e-12;4!UBERON:0002435;1.16e-12;4!UBERON:0000204;1.16e-12;4!UBERON:0002680;1.94e-12;9!UBERON:0001895;1.94e-12;9!UBERON:0002420;2.70e-12;9!UBERON:0000125;2.70e-12;9!UBERON:0007245;2.70e-12;9!UBERON:0002308;2.70e-12;9!UBERON:0010009;2.70e-12;9!UBERON:0010011;2.70e-12;9!UBERON:0000454;2.70e-12;9!UBERON:0002021;1.73e-10;5!UBERON:0001872;2.58e-10;5!UBERON:0004733;1.82e-09;12!UBERON:0002028;1.82e-09;12!UBERON:0002037;6.90e-09;6!UBERON:0007023;8.14e-09;114!UBERON:0004732;8.87e-09;13!UBERON:0001871;1.29e-07;6!UBERON:0002771;3.69e-07;2!UBERON:0002360;3.69e-07;2!UBERON:0002702;3.69e-07;2!UBERON:0001875;3.69e-07;2!UBERON:0000094;3.69e-07;2!UBERON:0006514;3.69e-07;2!UBERON:0010743;3.69e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,5.68e-58,32;UBERON:0001893,1.41e-54,34;UBERON:0000073,2.17e-53,53;UBERON:0002616,2.17e-53,53;UBERON:0001049,1.71e-50,56;UBERON:0005068,1.71e-50,56;UBERON:0006241,1.71e-50,56;UBERON:0007135,1.71e-50,56;UBERON:0002791,3.03e-49,32;UBERON:0003528,2.36e-46,34;UBERON:0002020,2.36e-46,34;UBERON:0002780,3.09e-45,41;UBERON:0001890,3.09e-45,41;UBERON:0003080,3.09e-45,41;UBERON:0006240,3.09e-45,41;UBERON:0001950,5.68e-44,20;UBERON:0000955,8.45e-41,68;UBERON:0006238,8.45e-41,68;UBERON:0002619,4.49e-40,22;UBERON:0001017,9.77e-39,81;UBERON:0000956,2.38e-35,25;UBERON:0000203,2.38e-35,25;UBERON:0001016,8.96e-35,89;UBERON:0003075,3.90e-34,82;UBERON:0007284,3.90e-34,82;UBERON:0002346,1.75e-32,86;UBERON:0000200,3.43e-31,6;UBERON:0003056,3.77e-30,61;UBERON:0010371,1.32e-26,104;UBERON:0007023,2.07e-24,114;UBERON:0010314,1.30e-20,132;UBERON:0004121,1.68e-17,171;UBERON:0000924,1.68e-17,171;UBERON:0006601,1.68e-17,171;UBERON:0001870,1.61e-16,3;UBERON:0009663,1.37e-15,7;UBERON:0000025,1.36e-13,192;UBERON:0002902,1.61e-13,1;UBERON:0009899,1.61e-13,1;UBERON:0001882,2.62e-13,1;UBERON:0005403,2.62e-13,1;UBERON:0007190,2.95e-13,1;UBERON:0002581,3.76e-13,1;UBERON:0002022,4.23e-13,1;UBERON:0011216,6.05e-13,223;UBERON:0001874,6.06e-13,1;UBERON:0000369,9.76e-13,4;UBERON:0002435,9.76e-13,4;UBERON:0000204,9.76e-13,4;UBERON:0010082,9.76e-13,4;UBERON:0002680,2.23e-12,9;UBERON:0001895,2.23e-12,9;UBERON:0010092,2.23e-12,9;UBERON:0002420,2.92e-12,9;UBERON:0000125,2.92e-12,9;UBERON:0007245,2.92e-12,9;UBERON:0002308,2.92e-12,9;UBERON:0010009,2.92e-12,9;UBERON:0010011,2.92e-12,9;UBERON:0000454,2.92e-12,9;UBERON:0002021,1.21e-10,5;UBERON:0004111,1.78e-10,240;UBERON:0001872,2.47e-10,5;UBERON:0004733,2.01e-09,12;UBERON:0002028,2.01e-09,12;UBERON:0007277,2.01e-09,12;UBERON:0002037,6.26e-09,6;UBERON:0006215,6.26e-09,6;UBERON:0004732,9.75e-09,13;UBERON:0000483,9.22e-08,306;UBERON:0000119,1.15e-07,309;UBERON:0003076,1.22e-07,15;UBERON:0003057,1.22e-07,15;UBERON:0001871,1.63e-07,6;UBERON:0002360,3.70e-07,2;UBERON:0000094,3.70e-07,2;UBERON:0010743,3.70e-07,2;UBERON:0002771,4.42e-07,2;UBERON:0001875,4.98e-07,2;UBERON:0006514,4.98e-07,2;UBERON:0002702,5.60e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.964771509003264,1.52581736317083,0.663475559587348,2.06883333267483,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0.451961481561065,0,0,1.7727022867646,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,1.001527445652,0,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.73418907760441,0,0.478901577171454,1.8460472781668,0.504143392443436,2.42050383624763,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62090203084147,0,0.413373593002368,1.26831620387814,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,1.15548546060614,1.44700101838268,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,1.22384682343646,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.562677665642051,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0.927680981618513,0,0,0,0,0,0,0,0,0,0.347249989866585,0,0.964771509003264,1.52581736317083,0.663475559587348,2.06883333267483,1.31631238292384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0.937057782901357,0,0,0.485560759068186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.176512253383001,0.451961481561065,0,0,1.7727022867646,0,0,0,0,0,0,0.514784993585894,0,0,0,0,0,0,0,1.20084057741958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0.681017030557878,0,0,0,0,0,1.33649024647654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0.258565912723101,0.66116300871345,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.732157589411779,1.001527445652,0,0.110929051536852,0.434674820589684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24432592536558,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0.323474434190045,0,0.109209638192014,0,0,0,0,0,0,0,0,0,1.73418907760441,0,0.478901577171454,1.8460472781668,0.504143392443436,2.42050383624763,0.645902582527404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.62090203084147,0,0.413373593002368,1.26831620387814,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,1.15548546060614,1.44700101838268,0,0,0,1.25692471932802,0,0,0,0,0.142953088353313,0.47404083519818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,0,0,0,0,0,0,0,0.470317296361523,0,0.471353094203252,0,0,0,0,0,0,0,0,0,0,0,0,0.573358332605805,0,1.22384682343646,0.436350690340377,0,0,0,0,0,0,0,0,0,0,0,0,0.535928260312357,0,0.310298987585686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:2652750..2652762,- | |||
}} | }} |
Latest revision as of 14:53, 25 July 2015
Short description: | p@chr17:2652750..2652762, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:2652750..2652762, - |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data