FFCP PHASE1:Hg19::chr20:1918006..1918018,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:1918006..1918018,+
|short_description=p@chr20:1918006..1918018,+
|description=CAGE_peak_at_chr20:1918006..1918018,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:1918006..1918018,+ | |||
|coexpression_cluster_id=C2607 | |||
|description=CAGE_peak_at_chr20:1918006..1918018,+ | |||
|id=chr20:1918006..1918018,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.60e-19!76;CL:0002194!1.23e-18!63;CL:0000576!1.23e-18!63;CL:0000040!1.23e-18!63;CL:0000559!1.23e-18!63;CL:0002057!1.87e-18!42;CL:0002009!4.15e-18!65;CL:0000557!1.32e-16!71;CL:0000839!2.01e-16!70;CL:0000860!8.10e-16!45;CL:0000763!1.44e-09!112;CL:0000049!1.44e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.98e-43;33!CL:0002057;9.98e-43;33!CL:0000473;1.17e-40;39!CL:0000234;1.17e-40;39!CL:0000576;4.49e-21;48!CL:0000766;9.23e-17;69!CL:0000235;1.07e-07;6!CL:0000763;1.53e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,5.45e-45,48;CL:0000234,5.45e-45,48;CL:0000860,1.88e-38,42;CL:0002057,1.88e-38,42;CL:0002194,1.71e-37,59;CL:0000576,1.71e-37,59;CL:0000040,1.71e-37,59;CL:0000559,1.71e-37,59;CL:0000766,2.20e-36,72;CL:0002009,7.47e-36,61;CL:0000839,3.45e-32,66;CL:0000557,1.60e-31,67;CL:0000763,9.79e-20,108;CL:0000049,9.79e-20,108;CL:0002087,2.16e-13,115;CL:0000738,4.58e-13,136;CL:0002031,2.26e-12,120;CL:0002032,3.21e-09,161;CL:0000837,3.21e-09,161;CL:0000037,2.24e-08,168;CL:0000988,6.93e-08,177;CL:0000235,7.61e-08,6 | |||
|ontology_enrichment_development_v019=CL:0002057;3.47e-27;42!CL:0000049;3.22e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.39e-13!57;UBERON:0005068!5.39e-13!57;UBERON:0006241!5.39e-13!57;UBERON:0007135!5.39e-13!57;UBERON:0002780!1.89e-12!41;UBERON:0001890!1.89e-12!41;UBERON:0006240!1.89e-12!41;UBERON:0002371!2.64e-12!80;UBERON:0001893!2.81e-12!34;UBERON:0002791!7.80e-12!33;UBERON:0003080!9.17e-12!42;UBERON:0001869!9.97e-12!32;UBERON:0002020!1.02e-11!34;UBERON:0003528!1.02e-11!34;UBERON:0002193!1.08e-11!112;UBERON:0002390!2.66e-11!102;UBERON:0003061!2.66e-11!102;UBERON:0001474!2.18e-10!86;UBERON:0002616!4.21e-10!59;UBERON:0000956!1.46e-09!25;UBERON:0000203!1.46e-09!25;UBERON:0007023!1.88e-09!115;UBERON:0002619!2.88e-09!22;UBERON:0002405!3.19e-09!115;UBERON:0004765!1.02e-08!101;UBERON:0001434!1.02e-08!101;UBERON:0000955!1.22e-08!69;UBERON:0006238!1.22e-08!69;UBERON:0001950!1.78e-08!20;UBERON:0002346!2.03e-08!90;UBERON:0003075!9.76e-08!86;UBERON:0007284!9.76e-08!86;UBERON:0001017!1.52e-07!82;UBERON:0005743!1.78e-07!86;UBERON:0000468!2.71e-07!659;UBERON:0003056!3.36e-07!61;UBERON:0000467!3.53e-07!625;UBERON:0000480!4.92e-07!626 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;2.11e-19;34!UBERON:0001869;6.21e-19;32!UBERON:0002791;2.15e-17;32!UBERON:0002619;3.21e-17;22!UBERON:0001950;4.36e-17;20!UBERON:0003528;2.14e-15;34!UBERON:0002020;2.14e-15;34!UBERON:0000956;1.14e-14;25!UBERON:0000203;1.14e-14;25!UBERON:0002780;2.85e-14;41!UBERON:0001890;2.85e-14;41!UBERON:0000200;3.47e-10;6!UBERON:0000073;1.63e-09;53!UBERON:0002616;1.63e-09;53!UBERON:0002420;1.84e-08;9!UBERON:0007245;1.84e-08;9!UBERON:0010009;1.84e-08;9!UBERON:0010011;1.84e-08;9!UBERON:0000454;1.84e-08;9!UBERON:0000369;5.03e-07;4!UBERON:0002435;5.03e-07;4!UBERON:0000204;5.03e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.56e-26,76;UBERON:0001474,1.70e-23,82;UBERON:0002390,1.79e-22,98;UBERON:0003061,1.79e-22,98;UBERON:0002405,1.06e-21,93;UBERON:0004765,1.59e-21,90;UBERON:0002193,1.99e-21,108;UBERON:0001893,9.70e-21,34;UBERON:0001869,1.35e-20,32;UBERON:0001434,2.06e-20,100;UBERON:0002780,2.87e-19,41;UBERON:0001890,2.87e-19,41;UBERON:0003080,2.87e-19,41;UBERON:0006240,2.87e-19,41;UBERON:0002791,8.68e-19,32;UBERON:0003528,2.43e-17,34;UBERON:0002020,2.43e-17,34;UBERON:0002619,2.57e-17,22;UBERON:0001950,3.21e-17,20;UBERON:0001049,4.21e-16,56;UBERON:0005068,4.21e-16,56;UBERON:0006241,4.21e-16,56;UBERON:0007135,4.21e-16,56;UBERON:0000073,4.86e-16,53;UBERON:0002616,4.86e-16,53;UBERON:0000956,9.42e-15,25;UBERON:0000203,9.42e-15,25;UBERON:0003056,1.02e-11,61;UBERON:0000955,1.64e-11,68;UBERON:0006238,1.64e-11,68;UBERON:0000200,2.21e-10,6;UBERON:0001017,3.75e-10,81;UBERON:0002204,4.74e-10,167;UBERON:0003075,2.08e-09,82;UBERON:0007284,2.08e-09,82;UBERON:0002346,2.25e-09,86;UBERON:0010371,1.01e-08,104;UBERON:0001016,2.12e-08,89;UBERON:0002420,2.40e-08,9;UBERON:0007245,2.40e-08,9;UBERON:0010009,2.40e-08,9;UBERON:0010011,2.40e-08,9;UBERON:0000454,2.40e-08,9;UBERON:0003081,2.66e-08,203;UBERON:0007023,1.06e-07,114;UBERON:0000369,6.32e-07,4;UBERON:0002435,6.32e-07,4;UBERON:0000204,6.32e-07,4;UBERON:0010082,6.32e-07,4 | |||
|phase1_expression=0.181678379270557,1.2846031433459,1.26858963686374,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,2.43966399395253,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0.376627918784408,0.382067028739756,0.164201178899891,0.236132343941038,0.393364276848904,0,0.77408061658038,0,0,0.369754010166788,0,0,0,0,3.00816671205213,0.434021741431704,1.11957737119962,0.647787332037959,0.77272670290256,3.92575244704825,1.88937971844405,1.4555043671269,3.95129362739664,5.34518254428373,3.09706370895104,2.3015391385772,1.5369642391746,1.6553756092201,2.06847408441971,1.93645405075148,2.70852973188684,6.21199720490596,3.0019676506363,2.02251136000576,7.34601341690166,1.92557416245656,5.75403413219137,1.9791078011203,3.39088217956774,1.70489900213078,8.41606792022894,1.70215567407342,6.85104473895132,2.76373531782418,2.60741459210101,1.52032191293582,4.23779651843358,1.84138817993782,2.84816148696796,0.211255286311942,0.212604299965044,0.209658645508376,0.786300418025466,1.05123824989054,2.08943262706204,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0.869079113764942,0,0.973269740605272,0,0,0.087834785693126,0.523916301990851,0,0.741568885568859,0.324547393654683,0.522389211897802,3.0580330919339,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,1.20848795132744,0.760272105718513,2.92874469057803,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,3.87780264148325,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0.286836620748814,0,0.560677600142307,0,1.48000529050296,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.747243402759005,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0.635795703478686,0.600182192168805,0.206105058476878,0,0.37223371266318,1.0126579934476,0.584622030967192,0.504867548488229,0.276149695926898,0,0.355009592516614,0.503760491138201,0.508681776931463,0,0,0,0,0,0,0,0.252320850875628,0,0,3.21620469096443,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.301586917234893,0.462942225792648,0,0,1.44331342025273,0.115930404975077,0,1.29929802984966,1.85194205030644,0.761016608938393,0,0,0.492434012174795,1.40402559083543,1.93220510975347,0,1.34385702559088,0.567100388969546,0.358234090811393,0,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.25248486685276,0.571481048629521,1.52795370223311,1.17217447210047,0,1.13110241973656,0,3.14409075893636,0,0,0.07333828582095,0.387815147273333,3.57656445851882,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,1.50719688529793,0.871533458600294,2.49932477955143,8.51366464488333,5.02257091432126,14.7583757638122,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.537182889719687,0,0,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,2.99602809578873,20.9413021442817,2.90090859405225,0.24538298343828,0,0,0.831883446123229,0.892144943985809,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0.862856803274467,0.533637789017222,0,0,0,0.744323423456331,0.306923946576125,1.40330047216537,2.81906128362542,0,2.41280881715411,0,0.462629081407967,0.532685175939381,0.0821271560138091,1.03850885836724,0.232420756919918,0.241718899183244,3.20810352485256,0.276242966807689,0.574072240823034,0.182091168006717,0.393373244878272,0,0.462092022626489,0,0,0.422206515571503,0,0,0.431831832204279,0,0,1.00337954770971,1.01950509218015,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0.082509499920588,1.72279661398852,2.60024098414608,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0.330569830721956,0,0,0.4046311234222,0.929691098594572,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,1.99031692572366,2.19225442626881,0,1.31178950409327,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0.354761064070598,1.47775344708365,0,0,0.699869440489966,0,0,0,0.470719003883896,0.43050537267123,1.68471475667626,0.886860307073351,2.06751060186264,0.507447609232169,0,1.13929437434833,0.238231775457789,2.05681136543097,0,0,1.58625035258854,0.320472213382419,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0.47003968731907,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.687010689511529,0.307240764308458,0,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0.293016358543788,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|phase1_expression=0.181678379270557,1.2846031433459,1.26858963686374,2.00146596706261,0,0,0,0,0,0.245733936501509,0,0.218441372130172,0.263766978228454,0.123766352960047,0,0,0.602694528023977,0,2.43966399395253,0.123121058076788,0,0,0.286235987131057,0.547497700291537,0.376627918784408,0.382067028739756,0.164201178899891,0.236132343941038,0.393364276848904,0,0.77408061658038,0,0,0.369754010166788,0,0,0,0,3.00816671205213,0.434021741431704,1.11957737119962,0.647787332037959,0.77272670290256,3.92575244704825,1.88937971844405,1.4555043671269,3.95129362739664,5.34518254428373,3.09706370895104,2.3015391385772,1.5369642391746,1.6553756092201,2.06847408441971,1.93645405075148,2.70852973188684,6.21199720490596,3.0019676506363,2.02251136000576,7.34601341690166,1.92557416245656,5.75403413219137,1.9791078011203,3.39088217956774,1.70489900213078,8.41606792022894,1.70215567407342,6.85104473895132,2.76373531782418,2.60741459210101,1.52032191293582,4.23779651843358,1.84138817993782,2.84816148696796,0.211255286311942,0.212604299965044,0.209658645508376,0.786300418025466,1.05123824989054,2.08943262706204,0,0.19891667719909,0,0,0.546138611262131,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,0.361439152384566,0.50133791063589,0.869079113764942,0,0.973269740605272,0,0,0.087834785693126,0.523916301990851,0,0.741568885568859,0.324547393654683,0.522389211897802,3.0580330919339,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0.550236083880135,0.208994966536811,0,0.35576626268671,0,1.20848795132744,0.760272105718513,2.92874469057803,0,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0.949265659568129,0.183201743930407,0,3.87780264148325,0.436094052142534,0.496971951695318,0.25326102332916,0.132409180813219,0.286836620748814,0,0.560677600142307,0,1.48000529050296,0.311211035399766,0.134710672069688,0,0,0,0,0,0,0.747243402759005,0.117434498643765,0,0,0.204154171254893,0.245668634623536,0.206651562351531,0,0.494533858557114,0,0.718618141816238,0,0.125118519871964,0,0,0,0.150238058906597,0,0.358779271377724,0.213557388818567,0.635795703478686,0.600182192168805,0.206105058476878,0,0.37223371266318,1.0126579934476,0.584622030967192,0.504867548488229,0.276149695926898,0,0.355009592516614,0.503760491138201,0.508681776931463,0,0,0,0,0,0,0,0.252320850875628,0,0,3.21620469096443,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0.219500570817251,0,0.301586917234893,0.462942225792648,0,0,1.44331342025273,0.115930404975077,0,1.29929802984966,1.85194205030644,0.761016608938393,0,0,0.492434012174795,1.40402559083543,1.93220510975347,0,1.34385702559088,0.567100388969546,0.358234090811393,0,0,0,0.088048434013226,0.414656231081544,0.144119953416961,0.25248486685276,0.571481048629521,1.52795370223311,1.17217447210047,0,1.13110241973656,0,3.14409075893636,0,0,0.07333828582095,0.387815147273333,3.57656445851882,0,0,0,0,0,0,0,0,0.823240336780769,0,0,0,1.50719688529793,0.871533458600294,2.49932477955143,8.51366464488333,5.02257091432126,14.7583757638122,0.239624855491583,0,0,0.289562613335158,0.821905290201534,0.537182889719687,0,0,0,0.128343036279748,0.254094624222463,0,0,0.335032530668698,0,2.99602809578873,20.9413021442817,2.90090859405225,0.24538298343828,0,0,0.831883446123229,0.892144943985809,0.157702415033935,0.234282829985426,0,0,0,0.664225598535437,0.184369168541703,0.173767228936166,0,0,0,0.862856803274467,0.533637789017222,0,0,0,0.744323423456331,0.306923946576125,1.40330047216537,2.81906128362542,0,2.41280881715411,0,0.462629081407967,0.532685175939381,0.0821271560138091,1.03850885836724,0.232420756919918,0.241718899183244,3.20810352485256,0.276242966807689,0.574072240823034,0.182091168006717,0.393373244878272,0,0.462092022626489,0,0,0.422206515571503,0,0,0.431831832204279,0,0,1.00337954770971,1.01950509218015,0.831076008928724,0.895499018888713,0,0,0,0.328014645699706,0.325378394664303,0.206082023295445,0,0.082509499920588,1.72279661398852,2.60024098414608,0,0.096670718292122,0,0,0,0.107420244868274,0.145016693914229,0.255679882248303,0.0890320356467374,0.330569830721956,0,0,0.4046311234222,0.929691098594572,0.31481234683064,0,0,0,0,0,0.143124886741991,0,0,0,0.255897791311334,0,0,0.78494864019923,0.539617372749944,0.274537029736055,0.471249609382746,0,0,0,0,0.487426979262569,0,0,0.141405431953713,0,0,1.99031692572366,2.19225442626881,0,1.31178950409327,0,0.30982349809975,0,0.143411352204052,0.196498082026242,0,0.354761064070598,1.47775344708365,0,0,0.699869440489966,0,0,0,0.470719003883896,0.43050537267123,1.68471475667626,0.886860307073351,2.06751060186264,0.507447609232169,0,1.13929437434833,0.238231775457789,2.05681136543097,0,0,1.58625035258854,0.320472213382419,0,0,0,0,0,0.159426272728822,0,0,0.211673582723883,0,0,0,0.47003968731907,0,0.169291777801603,0.1605880751037,0.201799707191048,0,0.687010689511529,0.307240764308458,0,0.166849141711909,0.586164286206121,0,0,0,0,0,0,0.293016358543788,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| ||
|short_description=p@chr20:1918006..1918018,+ | |||
}} | }} |
Latest revision as of 12:13, 28 July 2015
Short description: | p@chr20:1918006..1918018, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:1918006..1918018, + |
Coexpression cluster: | C2607_Neutrophils_medial_Monocytederived_CD14_amygdala_renal_occipital |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 5.45e-45 | 48 |
phagocyte | 5.45e-45 | 48 |
classical monocyte | 1.88e-38 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.88e-38 | 42 |
monopoietic cell | 1.71e-37 | 59 |
monocyte | 1.71e-37 | 59 |
monoblast | 1.71e-37 | 59 |
promonocyte | 1.71e-37 | 59 |
myeloid leukocyte | 2.20e-36 | 72 |
macrophage dendritic cell progenitor | 7.47e-36 | 61 |
myeloid lineage restricted progenitor cell | 3.45e-32 | 66 |
granulocyte monocyte progenitor cell | 1.60e-31 | 67 |
myeloid cell | 9.79e-20 | 108 |
common myeloid progenitor | 9.79e-20 | 108 |
nongranular leukocyte | 2.16e-13 | 115 |
leukocyte | 4.58e-13 | 136 |
hematopoietic lineage restricted progenitor cell | 2.26e-12 | 120 |
hematopoietic oligopotent progenitor cell | 3.21e-09 | 161 |
hematopoietic multipotent progenitor cell | 3.21e-09 | 161 |
hematopoietic stem cell | 2.24e-08 | 168 |
hematopoietic cell | 6.93e-08 | 177 |
macrophage | 7.61e-08 | 6 |