FFCP PHASE1:Hg19::chr20:24450498..24450540,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:24450498..24450540,+ | |||
|coexpression_cluster_id=C1480 | |coexpression_cluster_id=C1480 | ||
|description=CAGE_peak_at_chr20:24450498..24450540,+ | |description=CAGE_peak_at_chr20:24450498..24450540,+ | ||
|id=chr20:24450498..24450540,+ | |id=chr20:24450498..24450540,+ | ||
|ontology_enrichment_celltype=CL:0000133!2.04e-08!59;CL:0002319!3.09e-08!25;CL:0000221!1.37e-07!71 | |ontology_enrichment_celltype=CL:0000133!2.04e-08!59;CL:0002319!3.09e-08!25;CL:0000221!1.37e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.99e-11;25!CL:0000095;4.80e-08;17!CL:0000243;8.65e-08;15!CL:0000125;8.65e-08;15!CL:0000128;1.96e-07;7!CL:0000126;1.96e-07;7!CL:0000127;1.96e-07;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.70e-11,25;CL:0000133,1.37e-10,59;CL:0000095,4.56e-08,17;CL:0000123,4.56e-08,17;CL:0000333,6.61e-08,41;CL:0000243,8.30e-08,15;CL:0000125,8.30e-08,15;CL:0000030,8.30e-08,15;CL:0000339,8.30e-08,15;CL:0000128,2.07e-07,7;CL:0000126,2.07e-07,7;CL:0000127,2.07e-07,7;CL:0002453,2.07e-07,7;CL:0000221,2.46e-07,72 | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.66e-14;82!CL:0000339;8.65e-08;15 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0001893;2.78e-33;34!UBERON:0002791;8.71e-33;32!UBERON:0001869;9.93e-33;32!UBERON:0003528;1.08e-32;34!UBERON:0002020;1.08e-32;34!UBERON:0000073;1.63e-30;53!UBERON:0002616;1.63e-30;53!UBERON:0000956;7.86e-29;25!UBERON:0000203;7.86e-29;25!UBERON:0002780;1.38e-28;41!UBERON:0001890;1.38e-28;41!UBERON:0000955;1.65e-26;68!UBERON:0002619;8.71e-26;22!UBERON:0001017;7.05e-25;75!UBERON:0001016;1.85e-24;83!UBERON:0001950;7.23e-24;20!UBERON:0004732;1.14e-17;13!UBERON:0004733;2.04e-16;12!UBERON:0002028;2.04e-16;12!UBERON:0002680;5.06e-13;9!UBERON:0001895;5.06e-13;9!UBERON:0000125;8.19e-11;9!UBERON:0002308;8.19e-11;9!UBERON:0002420;1.52e-10;9!UBERON:0007245;1.52e-10;9!UBERON:0010009;1.52e-10;9!UBERON:0010011;1.52e-10;9!UBERON:0000454;1.52e-10;9!UBERON:0002037;1.08e-09;6!UBERON:0007023;2.23e-09;114!UBERON:0009663;1.06e-08;7!UBERON:0010314;1.15e-08;132!UBERON:0002298;2.13e-08;6!UBERON:0001871;2.68e-08;6!UBERON:0000200;3.54e-08;6!UBERON:0011216;3.81e-08;132!UBERON:0002021;2.89e-07;5!UBERON:0004121;3.71e-07;165!UBERON:0001872;5.51e-07;5 | |||
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| ||
|short_description=p@chr20:24450498..24450540,+ | |short_description=p@chr20:24450498..24450540,+ | ||
}} | }} |
Latest revision as of 12:37, 28 July 2015
Short description: | p@chr20:24450498..24450540, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:24450498..24450540, + |
Coexpression cluster: | C1480_optic_neuroectodermal_corpus_cerebellum_diencephalon_occipital_Astrocyte |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.70e-11 | 25 |
neurectodermal cell | 1.37e-10 | 59 |
neuron associated cell | 4.56e-08 | 17 |
neuron associated cell (sensu Vertebrata) | 4.56e-08 | 17 |
migratory neural crest cell | 6.61e-08 | 41 |
glial cell (sensu Vertebrata) | 8.30e-08 | 15 |
glial cell | 8.30e-08 | 15 |
glioblast | 8.30e-08 | 15 |
glioblast (sensu Vertebrata) | 8.30e-08 | 15 |
oligodendrocyte | 2.07e-07 | 7 |
macroglial cell | 2.07e-07 | 7 |
astrocyte | 2.07e-07 | 7 |
oligodendrocyte precursor cell | 2.07e-07 | 7 |
ectodermal cell | 2.46e-07 | 72 |