FFCP PHASE1:Hg19::chr20:58349377..58349415,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:58349377..58349415,+ to FFCP PHASE1:Hg19::chr20:58349377..58349415,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:58349377..58349415,+ | |||
|coexpression_cluster_id=C2113 | |||
|description=CAGE_peak_at_chr20:58349377..58349415,+ | |||
|id=chr20:58349377..58349415,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006241;5.73e-18;3!UBERON:0003057;5.73e-18;3!UBERON:0006215;5.08e-09;3!UBERON:0006222;1.16e-07;1!UBERON:0006601;3.79e-07;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.92e-71!57;UBERON:0005068!1.92e-71!57;UBERON:0006241!1.92e-71!57;UBERON:0007135!1.92e-71!57;UBERON:0001017!3.76e-65!82;UBERON:0000073!1.62e-64!94;UBERON:0001016!1.62e-64!94;UBERON:0005743!1.44e-61!86;UBERON:0002616!4.41e-58!59;UBERON:0000955!3.11e-56!69;UBERON:0006238!3.11e-56!69;UBERON:0002780!2.31e-50!41;UBERON:0001890!2.31e-50!41;UBERON:0006240!2.31e-50!41;UBERON:0002020!2.11e-49!34;UBERON:0003528!2.11e-49!34;UBERON:0001893!3.56e-49!34;UBERON:0003080!5.56e-49!42;UBERON:0002791!4.52e-47!33;UBERON:0003075!5.84e-46!86;UBERON:0007284!5.84e-46!86;UBERON:0002346!1.21e-45!90;UBERON:0001869!1.71e-44!32;UBERON:0002619!7.69e-38!22;UBERON:0000924!1.23e-33!173;UBERON:0006601!1.23e-33!173;UBERON:0007023!1.41e-33!115;UBERON:0004121!2.89e-33!169;UBERON:0001950!3.02e-33!20;UBERON:0000956!7.79e-33!25;UBERON:0000203!7.79e-33!25;UBERON:0003056!3.08e-31!61;UBERON:0000033!1.70e-28!123;UBERON:0000153!4.39e-28!129;UBERON:0007811!4.39e-28!129;UBERON:0003076!7.67e-23!15;UBERON:0003057!7.67e-23!15;UBERON:0002308!3.34e-18!9;UBERON:0000125!3.34e-18!9;UBERON:0000200!2.74e-16!6;UBERON:0004733!4.97e-16!12;UBERON:0002028!4.97e-16!12;UBERON:0007277!4.97e-16!12;UBERON:0002298!2.82e-15!8;UBERON:0000025!6.49e-15!194;UBERON:0004732!1.18e-14!13;UBERON:0002420!3.18e-14!9;UBERON:0007245!3.18e-14!9;UBERON:0010009!3.18e-14!9;UBERON:0010011!3.18e-14!9;UBERON:0000454!3.18e-14!9;UBERON:0009663!1.28e-13!7;UBERON:0001871!5.43e-12!7;UBERON:0002680!4.51e-10!9;UBERON:0001895!4.51e-10!9;UBERON:0010092!4.51e-10!9;UBERON:0004111!7.12e-10!241;UBERON:0002771!3.39e-09!3;UBERON:0001872!5.02e-09!5;UBERON:0002240!5.35e-09!3;UBERON:0006331!5.64e-09!3;UBERON:0000349!5.93e-09!5;UBERON:0002021!8.94e-09!5;UBERON:0000064!1.06e-08!219;UBERON:0000988!1.70e-08!3;UBERON:0000477!2.18e-08!286;UBERON:0001896!3.39e-08!3;UBERON:0005290!3.39e-08!3;UBERON:0010096!3.39e-08!3;UBERON:0000475!3.63e-08!365;UBERON:0000483!4.46e-08!309;UBERON:0000119!6.85e-08!312;UBERON:0000013!1.31e-07!5;UBERON:0002410!1.31e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.76e-28;32!UBERON:0003528;1.71e-26;34!UBERON:0002020;1.71e-26;34!UBERON:0000073;2.76e-26;53!UBERON:0002616;2.76e-26;53!UBERON:0002780;4.76e-26;41!UBERON:0001890;4.76e-26;41!UBERON:0001893;1.83e-24;34!UBERON:0002619;4.58e-24;22!UBERON:0001869;6.08e-24;32!UBERON:0001950;1.54e-21;20!UBERON:0000956;4.38e-21;25!UBERON:0000203;4.38e-21;25!UBERON:0001017;2.80e-20;75!UBERON:0000955;8.15e-20;68!UBERON:0002240;5.73e-18;3!UBERON:0005174;5.73e-18;3!UBERON:0001137;5.73e-18;3!UBERON:0001016;1.05e-17;83!UBERON:0000200;2.39e-16;6!UBERON:0002420;2.50e-16;9!UBERON:0007245;2.50e-16;9!UBERON:0010009;2.50e-16;9!UBERON:0010011;2.50e-16;9!UBERON:0000454;2.50e-16;9!UBERON:0000125;3.99e-16;9!UBERON:0002308;3.99e-16;9!UBERON:0009663;1.19e-13;7!UBERON:0002771;4.26e-13;2!UBERON:0002702;4.26e-13;2!UBERON:0001897;6.11e-13;2!UBERON:0010225;6.11e-13;2!UBERON:0011216;1.31e-09;132!UBERON:0001870;5.08e-09;3!UBERON:0005383;1.14e-08;3!UBERON:0005382;1.14e-08;3!UBERON:0001871;2.27e-08;6!UBERON:0001894;2.27e-08;7!UBERON:0002038;1.68e-07;1!UBERON:0003112;1.68e-07;1!UBERON:0011158;1.68e-07;1!UBERON:0009661;1.68e-07;1!UBERON:0002950;1.68e-07;1!UBERON:0003128;1.68e-07;1!UBERON:0001891;1.68e-07;1!UBERON:0001703;1.68e-07;1!UBERON:0002241;1.68e-07;1!UBERON:0001874;4.08e-07;1!UBERON:0002784;6.88e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.51e-50,56;UBERON:0005068,3.51e-50,56;UBERON:0006241,3.51e-50,56;UBERON:0007135,3.51e-50,56;UBERON:0001017,6.89e-47,81;UBERON:0001016,8.69e-42,89;UBERON:0000073,8.11e-40,53;UBERON:0002616,8.11e-40,53;UBERON:0002780,2.68e-37,41;UBERON:0001890,2.68e-37,41;UBERON:0003080,2.68e-37,41;UBERON:0006240,2.68e-37,41;UBERON:0000955,1.12e-36,68;UBERON:0006238,1.12e-36,68;UBERON:0003528,6.20e-35,34;UBERON:0002020,6.20e-35,34;UBERON:0003075,5.54e-33,82;UBERON:0007284,5.54e-33,82;UBERON:0002791,2.53e-32,32;UBERON:0002346,3.01e-31,86;UBERON:0001893,2.59e-30,34;UBERON:0001869,1.19e-27,32;UBERON:0010371,1.23e-27,104;UBERON:0003056,4.14e-24,61;UBERON:0002619,4.17e-24,22;UBERON:0010314,7.45e-23,132;UBERON:0001950,1.44e-21,20;UBERON:0004121,2.09e-21,171;UBERON:0000924,2.09e-21,171;UBERON:0006601,2.09e-21,171;UBERON:0000956,4.03e-21,25;UBERON:0000203,4.03e-21,25;UBERON:0007023,8.62e-21,114;UBERON:0002240,6.47e-18,3;UBERON:0005174,6.47e-18,3;UBERON:0001137,6.47e-18,3;UBERON:0002420,2.07e-16,9;UBERON:0007245,2.07e-16,9;UBERON:0010009,2.07e-16,9;UBERON:0010011,2.07e-16,9;UBERON:0000454,2.07e-16,9;UBERON:0000125,2.95e-16,9;UBERON:0002308,2.95e-16,9;UBERON:0000200,3.04e-16,6;UBERON:0011216,4.20e-15,223;UBERON:0009663,9.94e-14,7;UBERON:0003076,1.35e-13,15;UBERON:0003057,1.35e-13,15;UBERON:0002771,3.90e-13,2;UBERON:0001897,6.32e-13,2;UBERON:0010225,6.32e-13,2;UBERON:0002702,6.71e-13,2;UBERON:0000025,1.81e-11,192;UBERON:0001870,6.86e-09,3;UBERON:0005383,1.34e-08,3;UBERON:0005382,1.34e-08,3;UBERON:0001871,2.16e-08,6;UBERON:0001894,2.39e-08,7;UBERON:0006222,2.39e-08,7;UBERON:0004111,3.03e-08,240;UBERON:0002038,1.54e-07,1;UBERON:0009661,1.54e-07,1;UBERON:0002950,1.54e-07,1;UBERON:0001891,1.54e-07,1;UBERON:0009616,1.54e-07,1;UBERON:0010286,1.54e-07,1;UBERON:0003112,1.97e-07,1;UBERON:0011158,1.97e-07,1;UBERON:0003128,1.97e-07,1;UBERON:0001703,1.97e-07,1;UBERON:0002241,1.97e-07,1;UBERON:0004761,1.97e-07,1;UBERON:0009617,1.97e-07,1;UBERON:0001874,3.02e-07,1;UBERON:0002784,7.00e-07,4 | |||
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| ||
|short_description=p@chr20:58349377..58349415,+ | |||
}} | }} |
Latest revision as of 15:57, 28 July 2015
Short description: | p@chr20:58349377..58349415, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:58349377..58349415, + |
Coexpression cluster: | C2113_brain_medial_hippocampus_diencephalon_amygdala_substantia_olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data