FFCP PHASE1:Hg19::chr2:45165994..45166012,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=14bp_to_ENST00000444871_5end | |||
|cluster_id=chr2:45165994..45166012,- | |||
|coexpression_cluster_id=C573 | |||
|description=CAGE_peak_1_at_ENST00000444871_5end | |||
|id=chr2:45165994..45166012,- | |||
|ontology_enrichment_celltype=CL:0000306!1.97e-09!4;CL:0002222!1.97e-09!4;CL:0002224!1.97e-09!4;CL:0000066!9.99e-09!254;CL:0000064!1.10e-07!3;CL:0005012!1.10e-07!3;CL:0000067!1.10e-07!3;CL:0002304!1.10e-07!3;CL:0002586!1.15e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000306;4.33e-24;4!CL:0002222;4.33e-24;4!CL:0002224;4.33e-24;4!CL:0000064;2.62e-19;3!CL:0000067;2.62e-19;3!CL:0005012;2.62e-19;3!CL:0002304;2.62e-19;3!CL:0002586;4.40e-19;3!CL:0000149;1.89e-14;4!CL:0000075;3.78e-10;27!CL:0000147;4.70e-07;14!CL:0000342;5.03e-07;1!CL:0002565;5.03e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000306,2.94e-24,4;CL:0002222,2.94e-24,4;CL:0002224,2.94e-24,4;CL:0000064,3.25e-19,3;CL:0000067,3.25e-19,3;CL:0005012,3.25e-19,3;CL:0002304,3.25e-19,3;CL:0002586,3.67e-19,3;CL:0000149,1.65e-14,4;CL:0000075,3.62e-10,27;CL:0000147,4.74e-07,14;CL:0000342,6.20e-07,1;CL:0002565,6.20e-07,1 | |||
|ontology_enrichment_development_v019=UBERON:0010122;3.90e-13;2!UBERON:0003056;5.29e-09;3 | |||
|ontology_enrichment_disease=DOID:305!1.47e-14!106;DOID:0050687!1.52e-14!143;DOID:162!1.90e-07!235;DOID:14566!4.69e-07!239 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!8.96e-31!61;UBERON:0003075!3.64e-24!86;UBERON:0007284!3.64e-24!86;UBERON:0002346!6.88e-24!90;UBERON:0007625!3.22e-23!11;UBERON:0000970!4.31e-19!20;UBERON:0002104!5.59e-18!21;UBERON:0000033!2.59e-17!123;UBERON:0000019!2.63e-17!19;UBERON:0000047!2.63e-17!19;UBERON:0004088!2.63e-17!19;UBERON:0003072!2.63e-17!19;UBERON:0003071!2.63e-17!19;UBERON:0004128!2.63e-17!19;UBERON:0005743!6.86e-17!86;UBERON:0002780!2.32e-16!41;UBERON:0001890!2.32e-16!41;UBERON:0006240!2.32e-16!41;UBERON:0000020!4.78e-16!23;UBERON:0000153!5.78e-16!129;UBERON:0007811!5.78e-16!129;UBERON:0003080!7.82e-16!42;UBERON:0000073!1.32e-15!94;UBERON:0001016!1.32e-15!94;UBERON:0002616!1.56e-15!59;UBERON:0000955!1.56e-15!69;UBERON:0006238!1.56e-15!69;UBERON:0001456!2.72e-15!21;UBERON:0001032!3.33e-15!24;UBERON:0004456!3.33e-15!24;UBERON:0009663!4.72e-14!7;UBERON:0002420!1.09e-13!9;UBERON:0007245!1.09e-13!9;UBERON:0010009!1.09e-13!9;UBERON:0010011!1.09e-13!9;UBERON:0000454!1.09e-13!9;UBERON:0002791!1.45e-13!33;UBERON:0002308!2.04e-13!9;UBERON:0000125!2.04e-13!9;UBERON:0001893!4.89e-13!34;UBERON:0002020!6.16e-13!34;UBERON:0003528!6.16e-13!34;UBERON:0001017!7.93e-13!82;UBERON:0001049!2.40e-12!57;UBERON:0005068!2.40e-12!57;UBERON:0006241!2.40e-12!57;UBERON:0007135!2.40e-12!57;UBERON:0000924!1.24e-11!173;UBERON:0006601!1.24e-11!173;UBERON:0000966!1.46e-11!5;UBERON:0005388!1.46e-11!5;UBERON:0001802!1.46e-11!5;UBERON:0004121!1.70e-11!169;UBERON:0001869!5.45e-11!32;UBERON:0005085!4.70e-10!29;UBERON:0000488!1.74e-09!4;UBERON:0010077!1.97e-09!4;UBERON:0005389!1.97e-09!4;UBERON:0000484!1.97e-09!4;UBERON:0002546!1.97e-09!4;UBERON:0000965!1.97e-09!4;UBERON:0001803!1.97e-09!4;UBERON:0003073!1.97e-09!4;UBERON:0005426!1.97e-09!4;UBERON:0000369!2.52e-09!4;UBERON:0002435!2.52e-09!4;UBERON:0000204!2.52e-09!4;UBERON:0010082!2.52e-09!4;UBERON:0001801!4.76e-09!14;UBERON:0002200!2.28e-08!11;UBERON:0006876!2.28e-08!11;UBERON:0001778!1.10e-07!3;UBERON:0001775!1.10e-07!3;UBERON:0001781!1.15e-07!3;UBERON:0001782!1.15e-07!3;UBERON:0005424!1.15e-07!3;UBERON:0002075!1.44e-07!18;UBERON:0005383!1.45e-07!3;UBERON:0005382!1.45e-07!3;UBERON:0001264!2.79e-07!10;UBERON:0003922!2.79e-07!10;UBERON:0003923!2.79e-07!10;UBERON:0003924!2.79e-07!10;UBERON:0003921!2.79e-07!10;UBERON:0002114!3.76e-07!12 | |||
|ontology_enrichment_uberon_v019=UBERON:0007625;2.61e-64;11!UBERON:0000970;2.55e-56;20!UBERON:0002104;1.68e-53;21!UBERON:0000019;5.29e-51;19!UBERON:0000047;5.29e-51;19!UBERON:0004088;5.29e-51;19!UBERON:0010230;5.29e-51;19!UBERON:0000020;1.33e-48;23!UBERON:0001032;1.86e-46;24!UBERON:0004456;1.86e-46;24!UBERON:0001456;6.71e-46;21!UBERON:0000966;2.32e-30;5!UBERON:0005388;2.32e-30;5!UBERON:0001802;2.32e-30;5!UBERON:0001801;2.48e-26;14!UBERON:0000488;1.35e-24;4!UBERON:0010077;4.33e-24;4!UBERON:0005389;4.33e-24;4!UBERON:0000484;4.33e-24;4!UBERON:0000965;4.33e-24;4!UBERON:0001803;4.33e-24;4!UBERON:0010371;1.01e-20;31!UBERON:0001778;2.62e-19;3!UBERON:0001775;2.62e-19;3!UBERON:0001781;4.40e-19;3!UBERON:0001782;4.40e-19;3!UBERON:0005383;7.36e-19;3!UBERON:0005382;7.36e-19;3!UBERON:0002203;1.82e-16;6!UBERON:0001768;1.82e-16;6!UBERON:0002200;1.82e-16;6!UBERON:0000369;2.77e-14;4!UBERON:0002435;2.77e-14;4!UBERON:0000204;2.77e-14;4!UBERON:0009663;6.88e-14;7!UBERON:0001444;1.50e-13;48!UBERON:0000033;2.82e-13;50!UBERON:0001873;3.90e-13;2!UBERON:0002420;7.83e-11;9!UBERON:0000125;7.83e-11;9!UBERON:0007245;7.83e-11;9!UBERON:0002308;7.83e-11;9!UBERON:0010009;7.83e-11;9!UBERON:0010011;7.83e-11;9!UBERON:0000454;7.83e-11;9!UBERON:0000153;1.30e-10;54!UBERON:0007811;3.93e-10;52!UBERON:0001264;1.00e-09;10!UBERON:0006876;4.90e-09;11!UBERON:0001874;1.91e-07;1!UBERON:0003112;5.03e-07;1!UBERON:0011158;5.03e-07;1!UBERON:0002506;5.03e-07;1!UBERON:0003128;5.03e-07;1!UBERON:0001769;5.03e-07;1!UBERON:0001703;5.03e-07;1!UBERON:0002241;5.03e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,2.26e-64,11;UBERON:0000970,1.56e-53,21;UBERON:0002104,1.56e-53,21;UBERON:0000019,2.35e-48,20;UBERON:0000047,2.35e-48,20;UBERON:0010312,2.35e-48,20;UBERON:0004088,2.35e-48,20;UBERON:0010230,2.35e-48,20;UBERON:0003072,2.35e-48,20;UBERON:0004128,2.35e-48,20;UBERON:0003071,2.35e-48,20;UBERON:0000020,1.74e-46,24;UBERON:0001032,1.74e-46,24;UBERON:0004456,1.74e-46,24;UBERON:0001456,1.01e-43,22;UBERON:0005085,2.85e-30,31;UBERON:0003056,1.46e-27,61;UBERON:0001801,2.52e-26,14;UBERON:0000966,2.46e-25,6;UBERON:0005388,2.46e-25,6;UBERON:0001802,2.46e-25,6;UBERON:0000488,2.05e-24,4;UBERON:0010077,2.94e-24,4;UBERON:0005389,2.94e-24,4;UBERON:0000484,2.94e-24,4;UBERON:0002546,2.94e-24,4;UBERON:0000965,2.94e-24,4;UBERON:0001803,2.94e-24,4;UBERON:0003073,2.94e-24,4;UBERON:0005426,2.94e-24,4;UBERON:0003075,1.29e-19,82;UBERON:0007284,1.29e-19,82;UBERON:0001778,3.25e-19,3;UBERON:0001775,3.25e-19,3;UBERON:0001782,3.67e-19,3;UBERON:0005424,3.67e-19,3;UBERON:0005383,7.15e-19,3;UBERON:0005382,7.15e-19,3;UBERON:0002346,1.54e-18,86;UBERON:0001444,3.49e-18,49;UBERON:0000033,3.59e-18,56;UBERON:0002203,2.40e-16,6;UBERON:0001768,2.40e-16,6;UBERON:0002200,2.40e-16,6;UBERON:0000153,3.91e-16,62;UBERON:0007811,3.91e-16,62;UBERON:0010371,1.05e-14,104;UBERON:0001781,1.65e-14,4;UBERON:0000369,2.72e-14,4;UBERON:0002435,2.72e-14,4;UBERON:0000204,2.72e-14,4;UBERON:0010082,2.72e-14,4;UBERON:0009663,7.36e-14,7;UBERON:0010314,9.80e-14,132;UBERON:0001873,3.90e-13,2;UBERON:0010122,3.90e-13,2;UBERON:0000076,3.20e-12,8;UBERON:0002420,8.25e-11,9;UBERON:0000125,8.25e-11,9;UBERON:0007245,8.25e-11,9;UBERON:0002308,8.25e-11,9;UBERON:0010009,8.25e-11,9;UBERON:0010011,8.25e-11,9;UBERON:0000454,8.25e-11,9;UBERON:0001264,9.91e-10,10;UBERON:0006876,5.68e-09,11;UBERON:0004121,2.03e-08,171;UBERON:0000924,2.03e-08,171;UBERON:0006601,2.03e-08,171;UBERON:0001874,1.85e-07,1;UBERON:0003112,3.62e-07,1;UBERON:0011158,3.62e-07,1;UBERON:0003128,3.62e-07,1;UBERON:0001703,3.62e-07,1;UBERON:0002241,3.62e-07,1;UBERON:0004761,3.62e-07,1;UBERON:0009617,3.62e-07,1;UBERON:0002506,6.20e-07,1;UBERON:0001769,6.20e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.572471974262113,0.547497700291537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.0103453096956,3.1042115644759,6.4119393555982,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0.576175924479999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.725627385107593,0,0,0,0,0,0,0,0.354920400119532,0,0.241011029883482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20097467208968,0,0,0,0,0,0,2.88662684050547,5.44872903382861,1.40890433082986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82095137628028,5.24823433119529,5.53143270929315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,1.29848776109822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09224469574562,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,3.77899121781414,0.102268682502155,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,2.65722415744152,4.22087535188928,0,0,0,0,0,0,0,0,0,0,0.108647371922008,0,0,0,0,0,0,0,0,0,0,0,0.210998064528027,0,0,0,0,0,0,0.889563386041866,2.22415090103705,2.08843899010911,0.337005664903385,0,0.937057782901357,0,0,0.971121518136371,0,0,0,0.126373159256976,0,0,1.32930774541437,0.661983911750998,1.2557316736289,3.58417289318877,0,0.416024019039416,0.173559738335131,0,0,0,0.687944129886466,0,0,0,0,0,5.42353777873278,0,0,0.443175571691151,0.391102765469606,0.160317640503067,0,0.19980960958213,0.864542502924636,1.83258553865465,0.343189995723929,0,0.248505071130865,0.235694034616795,0,0,0,0,0.600420288709789,1.23214841002794,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.0824158583811665,0,0,0,0,0.817220436669454,0,0,0,0,0,0,0,0.236417121897595,0,0.211200673038813,0.179287339332845,0,0,0,0,0,0,0,2.39460383124975,0,0,0,0,0,0,0.13223260174269,0.684347351537318,1.40963004463334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0,0.110929051536852,0,0,0,0,0,0.235265819698172,0,0.144921028610825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0.279759015438889,0,0,0,0,1.31051565830417,0,0,0.123935764259002,0,0,0,0,0,0,0.963438376446893,0,0,0,0,0.0691572524642179,1.45328081068666,0,0,0,0,0,0,0,0,0,0,0,0,0,0.591424344868181,0,0,0,0.126831620387814,0.546974809018219,0,0,0,0.127762427639595,0,0,0,2.73194629621557,0,0,0,0,0.0657727735628491,0.354581522651905,0,0,3.61365856806804,0,0,0,0,15.8677928072177,1.26410889386181,0,0,0,0,0,0,0,0,0,0,0,0,0,0.447421727191169,0,0.243835849964539,0,0,0,0,0,0.198950775161368,1.07028081699812,0,0.769583617218004,0.150962843566674,0,0,0,0,0.471353094203252,0,0,0,0,0,0,0,0.357107877211315,0,0,0,0,0.143339583151451,0.157771562193185,0,0,0,0,0,0,0,0,0.126698501011437,0.203977659483963,1.06886962106224,0.459474497674225,0,0,0,0.829169439458779,0.413731983447581,0,0,0,0,0,0,0,0,0,0,0,0,0.407016343054873,0,0,9.43164622119162,0,0,0,0,0,0.320568492303233 | |||
|short_description=p1@ENST00000444871 | |||
}} |
Latest revision as of 10:23, 29 July 2015
Short description: | p1@ENST00000444871 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000444871_5end |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | 14bp_to_ENST00000444871_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
crystallin accumulating cell | 2.94e-24 | 4 |
vertebrate lens cell | 2.94e-24 | 4 |
lens epithelial cell | 2.94e-24 | 4 |
ciliated cell | 3.25e-19 | 3 |
ciliated epithelial cell | 3.25e-19 | 3 |
multi-ciliated epithelial cell | 3.25e-19 | 3 |
non-pigmented ciliary epithelial cell | 3.25e-19 | 3 |
retinal pigment epithelial cell | 3.67e-19 | 3 |
visual pigment cell | 1.65e-14 | 4 |
columnar/cuboidal epithelial cell | 3.62e-10 | 27 |
pigment cell | 4.74e-07 | 14 |
pigment cell (sensu Vertebrata) | 6.20e-07 | 1 |
iris pigment epithelial cell | 6.20e-07 | 1 |