FFCP PHASE1:Hg19::chr2:45169905..45169915,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:45169905..45169915,+ | |||
|coexpression_cluster_id=C573 | |||
|description=CAGE_peak_at_chr2:45169905..45169915,+ | |||
|id=chr2:45169905..45169915,+ | |||
|ontology_enrichment_celltype=CL:0002586!1.68e-11!3;CL:0000064!6.71e-11!3;CL:0005012!6.71e-11!3;CL:0000067!6.71e-11!3;CL:0002304!6.71e-11!3;CL:0000149!1.03e-08!4;CL:0000147!2.93e-08!14;CL:0000075!9.04e-07!27 | |||
|ontology_enrichment_celltype_v019=CL:0002586;4.83e-30;3!CL:0000306;5.14e-23;4!CL:0002222;5.14e-23;4!CL:0002224;5.14e-23;4!CL:0000149;8.02e-23;4!CL:0000147;3.23e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002586,6.50e-30,3;CL:0000306,4.11e-23,4;CL:0002222,4.11e-23,4;CL:0002224,4.11e-23,4;CL:0000149,1.00e-22,4;CL:0000147,3.44e-07,14 | |||
|ontology_enrichment_development_v019=UBERON:0010122;2.74e-12;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5409;7.07e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.27e-07,4 | |||
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|ontology_enrichment_uberon_v019=UBERON:0007625;3.08e-32;11!UBERON:0001781;4.83e-30;3!UBERON:0001782;4.83e-30;3!UBERON:0005383;4.83e-30;3!UBERON:0005382;4.83e-30;3!UBERON:0000970;1.51e-27;20!UBERON:0002104;2.96e-26;21!UBERON:0000020;5.30e-24;23!UBERON:0001874;3.67e-23;1!UBERON:0001032;5.13e-23;24!UBERON:0004456;5.13e-23;24!UBERON:0010077;5.14e-23;4!UBERON:0005389;5.14e-23;4!UBERON:0000484;5.14e-23;4!UBERON:0000965;5.14e-23;4!UBERON:0001803;5.14e-23;4!UBERON:0000369;8.02e-23;4!UBERON:0002435;8.02e-23;4!UBERON:0000204;8.02e-23;4!UBERON:0000019;6.67e-19;19!UBERON:0000047;6.67e-19;19!UBERON:0004088;6.67e-19;19!UBERON:0010230;6.67e-19;19!UBERON:0000966;1.77e-18;5!UBERON:0005388;1.77e-18;5!UBERON:0001802;1.77e-18;5!UBERON:0001456;3.77e-17;21!UBERON:0009663;1.69e-13;7!UBERON:0000007;1.48e-12;2!UBERON:0001873;2.74e-12;2!UBERON:0002420;1.02e-10;9!UBERON:0000125;1.02e-10;9!UBERON:0007245;1.02e-10;9!UBERON:0002308;1.02e-10;9!UBERON:0010009;1.02e-10;9!UBERON:0010011;1.02e-10;9!UBERON:0000454;1.02e-10;9!UBERON:0010371;1.12e-10;31!UBERON:0001801;2.85e-07;14!UBERON:0003296;6.50e-07;4!UBERON:0010133;6.50e-07;4 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273748850145768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567208902984407,0.665188192387692,0.527008714158756,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302714855289863,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0.580969714347592,0.518305275076852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0,0,0,0,0,0,1.44331342025273,2.78232971940184,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02580050046556,0.984043937099117,1.30151357865721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121360521749513,0,0,0,0,0,0,0.422008249231538,0,0,0,0,0,0.251932747854276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77148277162768,0.844175070377856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.593042257361244,0.617819694732514,0.939797545549098,0.067401132980677,0,0.468528891450678,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.277349346026277,0,0,0,0,0,0,0,0,0,0,1.12990370390266,0,0,0.126621591911757,0,0,0,0,0.288180834308212,0.114536596165916,0.171594997861965,0,0,0,0,0,0,0,0,0.410716136675979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211200673038813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0.1251909307065,0,0,0,0,0,0,0,0,0,0.144921028610825,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0.139879507719444,0,0.127894371303652,0,0,0.109209638192014,0.169732529954025,0,0.123935764259002,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0.198916222116275,0,0,0,0,0,0,0,0,0,0,0.546974809018219,0,0,0,0,0,0,3.64179362541979,0.682986574053893,0,0,0,0,0,0,0,0,1.25692471932802,0,0,0,0,0.857718530119876,0.632054446930906,0,0.521574816907738,0,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.237840181555137,0,2.74851291863573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.829169439458779,0.103432995861895,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0.320568492303233 | |||
|short_description=p@chr2:45169905..45169915,+ | |||
}} |
Latest revision as of 10:25, 29 July 2015
Short description: | p@chr2:45169905..45169915, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr2:45169905..45169915, + |
Coexpression cluster: | C573_Lens_small_retina_Ciliary_Retinal_eye_putamen |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
retinal pigment epithelial cell | 6.50e-30 | 3 |
crystallin accumulating cell | 4.11e-23 | 4 |
vertebrate lens cell | 4.11e-23 | 4 |
lens epithelial cell | 4.11e-23 | 4 |
visual pigment cell | 1.00e-22 | 4 |
pigment cell | 3.44e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.27e-07 | 4 |