FFCP PHASE1:Hg19::chr8:17941902..17941958,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr8:17941902..17941958,+ to FFCP PHASE1:Hg19::chr8:17941902..17941958,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-418bp_to_ENST00000499554,ENST00000505114,uc003wyp.1_5end | |||
|cluster_id=chr8:17941902..17941958,+ | |||
|coexpression_cluster_id=C1293 | |||
|description=CAGE_peak_1_at_ENST00000499554_5end,CAGE_peak_1_at_ENST00000505114_5end,CAGE_peak_1_at_uc003wyp.1_5end | |||
|id=chr8:17941902..17941958,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.09e-25!42;CL:0000860!2.90e-25!45;CL:0000766!1.70e-20!76;CL:0000839!3.51e-18!70;CL:0002194!1.43e-16!63;CL:0000576!1.43e-16!63;CL:0000040!1.43e-16!63;CL:0000559!1.43e-16!63;CL:0000557!4.07e-15!71;CL:0002009!4.37e-15!65;CL:0000763!1.60e-12!112;CL:0000049!1.60e-12!112;CL:0000738!1.72e-11!140;CL:0002087!2.11e-09!119;CL:0000988!3.70e-09!182;CL:0002031!6.15e-09!124;CL:0000037!7.07e-09!172;CL:0000566!7.07e-09!172;CL:0002032!5.51e-08!165;CL:0000837!5.51e-08!165;CL:0002393!1.35e-07!9;CL:0002397!1.35e-07!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.91e-42;33!CL:0002057;6.91e-42;33!CL:0000576;1.40e-32;48!CL:0000473;2.79e-30;39!CL:0000234;2.79e-30;39!CL:0000766;1.80e-26;69!CL:0002393;1.82e-11;6!CL:0002397;1.82e-11;6!CL:0000094;1.50e-10;8!CL:0000763;4.18e-10;100!CL:0002087;6.55e-08;104!CL:0000081;2.95e-07;11!CL:0000738;2.97e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.51e-62,42;CL:0002057,9.51e-62,42;CL:0000473,5.64e-55,48;CL:0000234,5.64e-55,48;CL:0000766,8.84e-52,72;CL:0000839,7.17e-45,66;CL:0002194,4.23e-43,59;CL:0000576,4.23e-43,59;CL:0000040,4.23e-43,59;CL:0000559,4.23e-43,59;CL:0002009,3.25e-41,61;CL:0000557,5.26e-40,67;CL:0000763,1.72e-31,108;CL:0000049,1.72e-31,108;CL:0000738,7.82e-27,136;CL:0002087,2.40e-21,115;CL:0002031,7.76e-21,120;CL:0000037,4.43e-20,168;CL:0000988,7.94e-20,177;CL:0002032,4.76e-18,161;CL:0000837,4.76e-18,161;CL:0002393,3.92e-16,9;CL:0002397,3.92e-16,9;CL:0000094,1.34e-10,8;CL:0000081,2.74e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-43;42!CL:0000049;2.35e-09;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.63e-15!102;UBERON:0003061!2.63e-15!102;UBERON:0007023!4.59e-14!115;UBERON:0001049!3.01e-12!57;UBERON:0005068!3.01e-12!57;UBERON:0006241!3.01e-12!57;UBERON:0007135!3.01e-12!57;UBERON:0002020!7.45e-12!34;UBERON:0003528!7.45e-12!34;UBERON:0002193!9.60e-12!112;UBERON:0002780!9.74e-12!41;UBERON:0001890!9.74e-12!41;UBERON:0006240!9.74e-12!41;UBERON:0002371!1.33e-11!80;UBERON:0001869!2.55e-11!32;UBERON:0001893!3.62e-11!34;UBERON:0003080!5.69e-11!42;UBERON:0001474!5.75e-11!86;UBERON:0002791!7.37e-11!33;UBERON:0000955!1.63e-10!69;UBERON:0006238!1.63e-10!69;UBERON:0002616!1.85e-10!59;UBERON:0001950!1.83e-09!20;UBERON:0002619!6.94e-09!22;UBERON:0004765!1.23e-08!101;UBERON:0001434!1.23e-08!101;UBERON:0003056!1.49e-08!61;UBERON:0003075!1.54e-08!86;UBERON:0007284!1.54e-08!86;UBERON:0002346!1.74e-08!90;UBERON:0001017!1.89e-08!82;UBERON:0000956!2.15e-08!25;UBERON:0000203!2.15e-08!25;UBERON:0005743!3.71e-08!86;UBERON:0000073!1.06e-07!94;UBERON:0001016!1.06e-07!94;UBERON:0002405!6.61e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;8.00e-13;32!UBERON:0001869;2.44e-11;32!UBERON:0001893;4.50e-11;34!UBERON:0003528;9.33e-11;34!UBERON:0002020;9.33e-11;34!UBERON:0002780;9.35e-10;41!UBERON:0001890;9.35e-10;41!UBERON:0002619;4.50e-09;22!UBERON:0000956;6.86e-09;25!UBERON:0000203;6.86e-09;25!UBERON:0001950;9.21e-09;20!UBERON:0000073;4.19e-07;53!UBERON:0002616;4.19e-07;53!UBERON:0002420;5.17e-07;9!UBERON:0007245;5.17e-07;9!UBERON:0010009;5.17e-07;9!UBERON:0010011;5.17e-07;9!UBERON:0000454;5.17e-07;9!UBERON:0009663;5.44e-07;7 | |||
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|phase1_expression=0.363356758541113,0.642301571672949,0.845726424575827,0,0.893922188854576,0,0,0.631719873426831,1.04474251279935,0.491467873003018,0.697801167972428,0.218441372130172,0.263766978228454,0.247532705920093,1.32558950291166,0,0,0,0,0.492484232307152,0.204000691244253,0.313454721478088,0.286235987131057,1.09499540058307,0.125542639594803,0.305653622991805,0.492603536699674,0.472264687882075,4.32700704533794,2.30297638858328,5.26374819274658,0,0.6024118375565,0.369754010166788,0.46480320348181,0.142169232487422,0.293600439334847,6.09394949385065,7.01905566145496,4.55722828503289,0.223915474239924,0.32389366601898,0.257575567634187,1.74477886535478,2.26725566213286,1.94067248950253,5.57829688573643,5.34518254428373,9.60089749774821,4.02769349251011,3.84241059793651,5.67557351732605,6.20542225325913,5.16387746867061,14.8969135253776,3.9530891303947,4.36649840092553,4.94391665779186,5.20342617030534,5.45579346029359,5.11469700639233,1.31940520074686,3.39088217956774,1.27867425159808,2.90209238628584,1.13477044938228,2.4912889959823,4.77372463987812,1.5644487552606,8.90474263290978,0,2.20966581592539,3.16462387440884,7.18267973460602,7.01594189884644,7.96702852931828,5.61643155732475,2.10247649978109,2.73233497385036,7.12531859353121,2.58591680358817,6.39324538176219,0,0,0,0.426730222566507,0,0,0,0,0.569212969109448,0.587237189370939,1.91136614062614,1.32171328579026,0.560508562981536,0.263384084775077,0,1.17903228824749,0.822405995998037,0.167186495390678,0.651844533267181,0,0,0.111410456885174,0.589211814949674,0.443067789167242,0.812411591295047,0.128091319725675,0.130059347559878,0,0,0,0,0.535081656179426,0,0,0.766440987203842,0.34362744548263,1.01207876807801,0,0,0,0.301150238155546,0.511946444617674,0,0,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0.670700859703636,0.383587685530591,0.361439152384566,0,0.724232594804119,0,0.973269740605272,0.283604451492204,0.443458794925128,0.263504357079378,1.0478326039817,0,0.741568885568859,0.324547393654683,0,0.132957960518865,0.238490624305342,0.571994910780128,0,0.596287222100115,0,0,0,0,0.275118041940067,0.208994966536811,0,0,0,0,0,0.24406205754817,0,0,0.0892997282840798,0,0.112611480483322,0,0,0,10.5424333948851,0,0,0.496971951695318,0.12663051166458,0.529636723252875,0.286836620748814,0.354668382198357,0,0,0,0.311211035399766,0.538842688278752,0.163461903113459,0.605429710579726,0,0.234321431833797,0.312160076830321,0,0.149448680551801,0.23486899728753,0.161872944368132,0.561803226808994,0.61246251376468,0.368502951935304,0.413303124703062,0,0,0,0,0.168336113954066,0,0.554128230968366,0,0.30648779579902,0.600952235626387,0.340296549480063,0,0.213557388818567,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0.184099797284599,0.646584227275248,0,0.201504196455281,0.339121184620975,0.386521706326594,0.272746120590835,0,0.487894824518382,0.132529768321485,0.348581828608555,0,0.252320850875628,0.36497735907583,0,0.643240938192885,2.76269842704961,0,0,0.236613600079688,0.505754070234305,0.723033089650446,0.110293972732394,0.217879444092406,0,0.404493924480493,0,0.769494313892781,0,0,0,0,0,0.982827216677626,0.590789906681404,1.32438929824395,0.737930631258681,0.514703430895577,0.219500570817251,0,0.301586917234893,0.185176890317059,0.325808305310325,0,0,0.579652024875384,0.117408694235822,0,0.925971025153221,0,0.790204397959275,0,0,0.468008530278475,0.445893486866185,0.93733833986777,0.335964256397719,0,0.268675568108545,0.290633938513962,0.766765358330422,0,0.704387472105808,1.03664057770386,2.59415916150531,0.88369703398466,0.888970520090367,0,1.17217447210047,0,0.616964956219941,0,1.42913216315289,0.336393253036082,0,0.2933531432838,0.129271715757778,0,0.845302752556,0.26593811658487,0,0,0,0,0.428933980974443,0,0,0,0.355391948742546,0,0,0,0,0,0.502257091432126,2.10833939483032,0.479249710983165,0,0,0.289562613335158,0.61642896765115,0.716243852959582,0.224170287987055,0.591092280605782,0.431255149719035,0.513372145118994,0.254094624222463,0,0,0.670065061337395,0,5.99205619157746,2.99161459204025,3.72973962092432,0.24538298343828,0,0.813795071099207,0.207970861530807,0,0.473107245101804,0.35142424497814,0.902838299183157,0,1.03473071292505,0,0.368738337083406,0.434418072340414,0.391602314925481,0.343143423810856,1.03384013061444,1.72571360654893,2.66818894508611,1.21251028578504,1.66435439510497,0.30239029332968,0,0.306923946576125,0.280660094433074,0.384417447767103,1.53512174720011,0.321707842287215,0,0.308419387605311,0.177561725313127,0.0821271560138091,0,0.348631135379878,0.241718899183244,0.601519410909855,0.276242966807689,0.114814448164607,0.546273504020151,0.393373244878272,0,0,0,0,0,1.13733384070897,0.170093705276516,0.647747748306418,0,0.812839312631559,0,0.509752546090077,0,0.223874754722178,1.53481913652154,1.3071772551245,0,0.328014645699706,0.325378394664303,0.9273691048295,0,0.247528499761764,0,1.30012049207304,0,0.48335359146061,0.462145851343933,0.307007349452259,0.137836572484531,0.429680979473094,0.290033387828457,0.5965863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| ||
|short_description=p1@ENST00000499554,p1@ENST00000505114,p1@uc003wyp.1 | |||
}} | }} |
Latest revision as of 16:31, 31 July 2015
Short description: | p1@ENST00000499554, p1@ENST00000505114, p1@uc003wyp.1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000499554_5end, CAGE_peak_1_at_ENST00000505114_5end, CAGE_peak_1_at_uc003wyp.1_5end |
Coexpression cluster: | C1293_CD14_CD14CD16_Basophils_Mast_Eosinophils_Neutrophils_Peripheral |
Association with transcript: | -418bp_to_ENST00000499554, ENST00000505114, uc003wyp.1_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.51e-62 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.51e-62 | 42 |
defensive cell | 5.64e-55 | 48 |
phagocyte | 5.64e-55 | 48 |
myeloid leukocyte | 8.84e-52 | 72 |
myeloid lineage restricted progenitor cell | 7.17e-45 | 66 |
monopoietic cell | 4.23e-43 | 59 |
monocyte | 4.23e-43 | 59 |
monoblast | 4.23e-43 | 59 |
promonocyte | 4.23e-43 | 59 |
macrophage dendritic cell progenitor | 3.25e-41 | 61 |
granulocyte monocyte progenitor cell | 5.26e-40 | 67 |
myeloid cell | 1.72e-31 | 108 |
common myeloid progenitor | 1.72e-31 | 108 |
leukocyte | 7.82e-27 | 136 |
nongranular leukocyte | 2.40e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 7.76e-21 | 120 |
hematopoietic stem cell | 4.43e-20 | 168 |
hematopoietic cell | 7.94e-20 | 177 |
hematopoietic oligopotent progenitor cell | 4.76e-18 | 161 |
hematopoietic multipotent progenitor cell | 4.76e-18 | 161 |
intermediate monocyte | 3.92e-16 | 9 |
CD14-positive, CD16-positive monocyte | 3.92e-16 | 9 |
granulocyte | 1.34e-10 | 8 |
blood cell | 2.74e-07 | 11 |