FFCP PHASE1:Mm9::chr5:139606124..139606135,-: Difference between revisions
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{{FFCP|EntrezGene=19085|HGNC=|MCL_coexpression_id=1|UniProt=D3YTM5|association_with_transcript=-11bp_to_ENSMUST00000129851_5end|description=CAGE_peak_7_at_Prkar1b_5end|id=chr5:139606124..139606135,-|ontology_enrichment_celltype=CL:0000117!3.32e-17!23;CL:0000337!3.32e-17!23;CL:0000540!8.86e-12!33;CL:0000047!8.86e-12!33;CL:0000031!8.86e-12!33;CL:0000404!8.86e-12!33;CL:0000393!3.58e-09!39;CL:0000211!3.58e-09!39;CL:0002319!8.21e-09!43;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0000055!7.25e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-11,23;CL:0000337,1.12e-11,23;CL:0002614,8.25e-11,3;CL:0002610,4.27e-10,3;CL:0000540,1.39e-07,33;CL:0000047,1.39e-07,33;CL:0000031,1.39e-07,33;CL:0000404,1.39e-07,33|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000955!1.07e-30!50;UBERON:0006238!1.07e-30!50;UBERON:0001049!1.10e-30!52;UBERON:0005068!1.10e-30!52;UBERON:0006241!1.10e-30!52;UBERON:0007135!1.10e-30!52;UBERON:0001017!6.42e-30!73;UBERON:0005743!6.42e-30!73;UBERON:0002616!2.76e-29!49;UBERON:0002020!7.55e-29!34;UBERON:0000073!8.64e-29!75;UBERON:0001016!8.64e-29!75;UBERON:0002791!1.03e-24!29;UBERON:0003528!1.03e-24!29;UBERON:0001893!1.03e-24!29;UBERON:0000033!8.79e-24!63;UBERON:0002346!1.37e-23!71;UBERON:0003075!1.37e-23!71;UBERON:0007284!1.37e-23!71;UBERON:0003080!1.45e-21!40;UBERON:0004121!3.08e-21!102;UBERON:0000924!3.08e-21!102;UBERON:0006601!3.08e-21!102;UBERON:0002780!3.44e-20!39;UBERON:0001890!3.44e-20!39;UBERON:0006240!3.44e-20!39;UBERON:0003056!1.26e-17!49;UBERON:0000956!8.55e-17!21;UBERON:0001869!8.55e-17!21;UBERON:0000203!8.55e-17!21;UBERON:0002619!1.19e-14!17;UBERON:0007811!1.32e-14!86;UBERON:0002021!1.79e-14!10;UBERON:0000411!1.79e-14!10;UBERON:0001950!1.79e-14!10;UBERON:0000153!1.70e-12!94;UBERON:0002298!8.35e-11!6;UBERON:0003076!1.65e-09!12;UBERON:0003057!1.65e-09!12;UBERON:0002420!4.58e-09!8;UBERON:0007245!4.58e-09!8;UBERON:0010009!4.58e-09!8;UBERON:0010011!4.58e-09!8;UBERON:0000454!4.58e-09!8;UBERON:0000025!1.98e-08!114;UBERON:0002950!6.97e-08!4;UBERON:0001891!6.97e-08!4;UBERON:0009616!6.97e-08!4;UBERON:0004111!7.24e-08!122|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.82e-31,54;UBERON:0001017,4.66e-28,73;UBERON:0001016,3.57e-27,75;UBERON:0001049,1.03e-26,52;UBERON:0005068,1.03e-26,52;UBERON:0006241,1.03e-26,52;UBERON:0007135,1.03e-26,52;UBERON:0002346,8.25e-23,64;UBERON:0003075,8.25e-23,64;UBERON:0007284,8.25e-23,64;UBERON:0000955,2.31e-22,47;UBERON:0006238,2.31e-22,47;UBERON:0004121,4.71e-22,95;UBERON:0000924,4.71e-22,95;UBERON:0006601,4.71e-22,95;UBERON:0002616,1.95e-20,46;UBERON:0010371,2.09e-19,73;UBERON:0002020,2.45e-17,34;UBERON:0003076,1.33e-14,12;UBERON:0003057,1.33e-14,12;UBERON:0003080,1.74e-14,40;UBERON:0010314,2.12e-14,92;UBERON:0002950,6.96e-14,4;UBERON:0001891,6.96e-14,4;UBERON:0009616,6.96e-14,4;UBERON:0010286,6.96e-14,4;UBERON:0003528,3.23e-13,29;UBERON:0002791,3.23e-13,29;UBERON:0001893,3.23e-13,29;UBERON:0003056,7.75e-13,49;UBERON:0002780,9.51e-13,39;UBERON:0001890,9.51e-13,39;UBERON:0006240,9.51e-13,39;UBERON:0002038,8.25e-11,3;UBERON:0009663,8.25e-11,3;UBERON:0009661,8.25e-11,3;UBERON:0000125,8.25e-11,3;UBERON:0002308,8.25e-11,3;UBERON:0002021,1.09e-10,10;UBERON:0000411,1.09e-10,10;UBERON:0001950,1.09e-10,10;UBERON:0004684,4.27e-10,3;UBERON:0002275,4.27e-10,3;UBERON:0000025,1.27e-09,114;UBERON:0004111,1.11e-08,122;UBERON:0000956,2.98e-08,21;UBERON:0001869,2.98e-08,21;UBERON:0000203,2.98e-08,21;UBERON:0004733,3.35e-08,6;UBERON:0004732,3.35e-08,6;UBERON:0002028,3.35e-08,6;UBERON:0007277,3.35e-08,6;UBERON:0002619,5.94e-08,17;UBERON:0002240,6.45e-08,6;UBERON:0005174,6.45e-08,6;UBERON:0001137,6.45e-08,6;UBERON:0001896,2.55e-07,2;UBERON:0002298,2.55e-07,2;UBERON:0005290,2.55e-07,2;UBERON:0010096,2.55e-07,2;UBERON:0011216,3.05e-07,194|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,2.42955395046775,0,0.191690942036473,0,2.20231761998777,2.55374676170375,3.22573719838111,0.263772575460388,0.548925861614458,0.52091337055676,4.74611098302348,6.19038871034848,2.75036845998258,0,1.56608848879013,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,1.25668024088073,0,0,0,0,4.19413790333504,0,1.13088916901578,3.82413504423008,1.53429274398198,2.0778804455956,1.78465389374533,0,0,0,0,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0.395287777946524,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19085 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3YTM5 | |||
|association_with_transcript=-11bp_to_ENSMUST00000129851_5end | |||
|cluster_id=chr5:139606124..139606135,- | |||
|description=CAGE_peak_7_at_Prkar1b_5end | |||
|id=chr5:139606124..139606135,- | |||
|ontology_enrichment_celltype=CL:0000117!3.32e-17!23;CL:0000337!3.32e-17!23;CL:0000540!8.86e-12!33;CL:0000047!8.86e-12!33;CL:0000031!8.86e-12!33;CL:0000404!8.86e-12!33;CL:0000393!3.58e-09!39;CL:0000211!3.58e-09!39;CL:0002319!8.21e-09!43;CL:0000221!1.71e-08!44;CL:0000133!1.71e-08!44;CL:0000055!7.25e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.12e-11,23;CL:0000337,1.12e-11,23;CL:0002614,8.25e-11,3;CL:0002610,4.27e-10,3;CL:0000540,1.39e-07,33;CL:0000047,1.39e-07,33;CL:0000031,1.39e-07,33;CL:0000404,1.39e-07,33 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.07e-30!50;UBERON:0006238!1.07e-30!50;UBERON:0001049!1.10e-30!52;UBERON:0005068!1.10e-30!52;UBERON:0006241!1.10e-30!52;UBERON:0007135!1.10e-30!52;UBERON:0001017!6.42e-30!73;UBERON:0005743!6.42e-30!73;UBERON:0002616!2.76e-29!49;UBERON:0002020!7.55e-29!34;UBERON:0000073!8.64e-29!75;UBERON:0001016!8.64e-29!75;UBERON:0002791!1.03e-24!29;UBERON:0003528!1.03e-24!29;UBERON:0001893!1.03e-24!29;UBERON:0000033!8.79e-24!63;UBERON:0002346!1.37e-23!71;UBERON:0003075!1.37e-23!71;UBERON:0007284!1.37e-23!71;UBERON:0003080!1.45e-21!40;UBERON:0004121!3.08e-21!102;UBERON:0000924!3.08e-21!102;UBERON:0006601!3.08e-21!102;UBERON:0002780!3.44e-20!39;UBERON:0001890!3.44e-20!39;UBERON:0006240!3.44e-20!39;UBERON:0003056!1.26e-17!49;UBERON:0000956!8.55e-17!21;UBERON:0001869!8.55e-17!21;UBERON:0000203!8.55e-17!21;UBERON:0002619!1.19e-14!17;UBERON:0007811!1.32e-14!86;UBERON:0002021!1.79e-14!10;UBERON:0000411!1.79e-14!10;UBERON:0001950!1.79e-14!10;UBERON:0000153!1.70e-12!94;UBERON:0002298!8.35e-11!6;UBERON:0003076!1.65e-09!12;UBERON:0003057!1.65e-09!12;UBERON:0002420!4.58e-09!8;UBERON:0007245!4.58e-09!8;UBERON:0010009!4.58e-09!8;UBERON:0010011!4.58e-09!8;UBERON:0000454!4.58e-09!8;UBERON:0000025!1.98e-08!114;UBERON:0002950!6.97e-08!4;UBERON:0001891!6.97e-08!4;UBERON:0009616!6.97e-08!4;UBERON:0004111!7.24e-08!122 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.82e-31,54;UBERON:0001017,4.66e-28,73;UBERON:0001016,3.57e-27,75;UBERON:0001049,1.03e-26,52;UBERON:0005068,1.03e-26,52;UBERON:0006241,1.03e-26,52;UBERON:0007135,1.03e-26,52;UBERON:0002346,8.25e-23,64;UBERON:0003075,8.25e-23,64;UBERON:0007284,8.25e-23,64;UBERON:0000955,2.31e-22,47;UBERON:0006238,2.31e-22,47;UBERON:0004121,4.71e-22,95;UBERON:0000924,4.71e-22,95;UBERON:0006601,4.71e-22,95;UBERON:0002616,1.95e-20,46;UBERON:0010371,2.09e-19,73;UBERON:0002020,2.45e-17,34;UBERON:0003076,1.33e-14,12;UBERON:0003057,1.33e-14,12;UBERON:0003080,1.74e-14,40;UBERON:0010314,2.12e-14,92;UBERON:0002950,6.96e-14,4;UBERON:0001891,6.96e-14,4;UBERON:0009616,6.96e-14,4;UBERON:0010286,6.96e-14,4;UBERON:0003528,3.23e-13,29;UBERON:0002791,3.23e-13,29;UBERON:0001893,3.23e-13,29;UBERON:0003056,7.75e-13,49;UBERON:0002780,9.51e-13,39;UBERON:0001890,9.51e-13,39;UBERON:0006240,9.51e-13,39;UBERON:0002038,8.25e-11,3;UBERON:0009663,8.25e-11,3;UBERON:0009661,8.25e-11,3;UBERON:0000125,8.25e-11,3;UBERON:0002308,8.25e-11,3;UBERON:0002021,1.09e-10,10;UBERON:0000411,1.09e-10,10;UBERON:0001950,1.09e-10,10;UBERON:0004684,4.27e-10,3;UBERON:0002275,4.27e-10,3;UBERON:0000025,1.27e-09,114;UBERON:0004111,1.11e-08,122;UBERON:0000956,2.98e-08,21;UBERON:0001869,2.98e-08,21;UBERON:0000203,2.98e-08,21;UBERON:0004733,3.35e-08,6;UBERON:0004732,3.35e-08,6;UBERON:0002028,3.35e-08,6;UBERON:0007277,3.35e-08,6;UBERON:0002619,5.94e-08,17;UBERON:0002240,6.45e-08,6;UBERON:0005174,6.45e-08,6;UBERON:0001137,6.45e-08,6;UBERON:0001896,2.55e-07,2;UBERON:0002298,2.55e-07,2;UBERON:0005290,2.55e-07,2;UBERON:0010096,2.55e-07,2;UBERON:0011216,3.05e-07,194 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0.202316460859598,1.05798195854407,0,0,0,0,0,0,0,0,0,0.135005938331691,0.210324961351382,0.571301968807607,2.42955395046775,0,0.191690942036473,0,2.20231761998777,2.55374676170375,3.22573719838111,0.263772575460388,0.548925861614458,0.52091337055676,4.74611098302348,6.19038871034848,2.75036845998258,0,1.56608848879013,1.3047961207771,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.148442139064825,0,0,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.04946557908083,1.25668024088073,0,0,0,0,4.19413790333504,0,1.13088916901578,3.82413504423008,1.53429274398198,2.0778804455956,1.78465389374533,0,0,0,0,0,0,0,0,0,0,0,1.03481348295606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40825884981688,2.93029216480508,0,0,0,0,0,0,0,0,0,0,0.395287777946524,2.57057053137446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0,0,0,0,0.564751842617067,0.920650473014354,1.71868654031819,0.515559547031063,2.05524755931193,3.7769694869485,2.70009000092722,0.45032120322422,2.26571204492102,2.5888015587591,0,0,0,0,0,0.183843508450014,0,0.412070114477788,0,0,0.25347929989024,0.377252682772152,0.0936415074698824,0.320125762024346,0.17230640686684,0,0.231768651889711,0,0,0.441596760403192,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0,0,0,0,0.237270036248348,0.0985044823755635,0,0,0,0.249810577937946,0,0,0,0,0.231867835620421 | |||
|short_description=p7@Prkar1b | |||
}} |
Revision as of 22:49, 3 August 2015
Short description: | p7@Prkar1b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_7_at_Prkar1b_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -11bp_to_ENSMUST00000129851_5end |
EntrezGene: | 19085 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.12e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.12e-11 | 23 |
neuron of the substantia nigra | 8.25e-11 | 3 |
raphe nuclei neuron | 4.27e-10 | 3 |
neuron | 1.39e-07 | 33 |
neuronal stem cell | 1.39e-07 | 33 |
neuroblast | 1.39e-07 | 33 |
electrically signaling cell | 1.39e-07 | 33 |