FFCP PHASE1:Mm9::chr3:89568354..89568365,-: Difference between revisions
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{{FFCP|EntrezGene=11444|HGNC=|MCL_coexpression_id=20|UniProt=Q8BGP7|association_with_transcript=188bp_to_ENSMUST00000029562,NM_009602,uc008qaa.2_5end|description=CAGE_peak_2_at_Chrnb2_5end|id=chr3:89568354..89568365,-|ontology_enrichment_celltype=CL:0000540!2.70e-16!33;CL:0000047!2.70e-16!33;CL:0000031!2.70e-16!33;CL:0000404!2.70e-16!33;CL:0000117!5.24e-16!23;CL:0000337!5.24e-16!23;CL:0000393!1.94e-12!39;CL:0000211!1.94e-12!39;CL:0002319!2.01e-12!43;CL:0000221!6.17e-12!44;CL:0000133!6.17e-12!44;CL:0000055!1.86e-09!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-31,23;CL:0000337,1.88e-31,23;CL:0000540,6.35e-21,33;CL:0000047,6.35e-21,33;CL:0000031,6.35e-21,33;CL:0000404,6.35e-21,33;CL:0000393,3.39e-17,39;CL:0000211,3.39e-17,39;CL:0002319,2.73e-15,43;CL:0000221,7.23e-15,44;CL:0000133,7.23e-15,44;CL:0002610,3.94e-11,3;CL:0002614,1.04e-10,3;CL:0002612,9.58e-10,3;CL:0002613,4.93e-09,3;CL:0002321,3.93e-08,70;CL:0002611,8.04e-07,2|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!6.53e-31!73;UBERON:0005743!6.53e-31!73;UBERON:0000073!8.65e-31!75;UBERON:0001016!8.65e-31!75;UBERON:0004121!1.05e-29!102;UBERON:0000924!1.05e-29!102;UBERON:0006601!1.05e-29!102;UBERON:0002346!1.45e-28!71;UBERON:0003075!1.45e-28!71;UBERON:0007284!1.45e-28!71;UBERON:0000033!3.46e-24!63;UBERON:0001049!1.31e-23!52;UBERON:0005068!1.31e-23!52;UBERON:0006241!1.31e-23!52;UBERON:0007135!1.31e-23!52;UBERON:0000955!6.30e-22!50;UBERON:0006238!6.30e-22!50;UBERON:0002616!5.97e-21!49;UBERON:0003056!1.10e-18!49;UBERON:0002020!1.05e-15!34;UBERON:0003080!3.24e-15!40;UBERON:0002780!2.77e-14!39;UBERON:0001890!2.77e-14!39;UBERON:0006240!2.77e-14!39;UBERON:0007811!9.82e-14!86;UBERON:0000153!2.23e-11!94;UBERON:0002791!2.91e-11!29;UBERON:0003528!2.91e-11!29;UBERON:0001893!2.91e-11!29;UBERON:0003076!2.02e-09!12;UBERON:0003057!2.02e-09!12;UBERON:0002420!4.38e-09!8;UBERON:0007245!4.38e-09!8;UBERON:0010009!4.38e-09!8;UBERON:0010011!4.38e-09!8;UBERON:0000454!4.38e-09!8;UBERON:0002298!4.08e-08!6;UBERON:0002240!1.32e-07!6;UBERON:0005174!1.32e-07!6;UBERON:0001137!1.32e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.48e-32,54;UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0001049,2.42e-27,52;UBERON:0005068,2.42e-27,52;UBERON:0006241,2.42e-27,52;UBERON:0007135,2.42e-27,52;UBERON:0003076,9.71e-25,12;UBERON:0003057,9.71e-25,12;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002346,2.26e-21,64;UBERON:0003075,2.26e-21,64;UBERON:0007284,2.26e-21,64;UBERON:0010371,3.54e-18,73;UBERON:0002240,4.53e-18,6;UBERON:0005174,4.53e-18,6;UBERON:0001137,4.53e-18,6;UBERON:0002420,4.98e-18,8;UBERON:0007245,4.98e-18,8;UBERON:0010009,4.98e-18,8;UBERON:0010011,4.98e-18,8;UBERON:0000454,4.98e-18,8;UBERON:0000955,6.89e-18,47;UBERON:0006238,6.89e-18,47;UBERON:0002020,6.86e-17,34;UBERON:0002616,3.49e-16,46;UBERON:0001948,6.11e-15,5;UBERON:0002315,6.11e-15,5;UBERON:0002950,1.27e-13,4;UBERON:0001891,1.27e-13,4;UBERON:0009616,1.27e-13,4;UBERON:0010286,1.27e-13,4;UBERON:0010314,1.76e-13,92;UBERON:0004684,3.94e-11,3;UBERON:0002275,3.94e-11,3;UBERON:0002038,1.04e-10,3;UBERON:0009663,1.04e-10,3;UBERON:0009661,1.04e-10,3;UBERON:0000125,1.04e-10,3;UBERON:0002308,1.04e-10,3;UBERON:0003080,1.98e-10,40;UBERON:0000025,5.45e-10,114;UBERON:0002257,9.58e-10,3;UBERON:0000369,2.27e-09,5;UBERON:0002435,2.27e-09,5;UBERON:0000204,2.27e-09,5;UBERON:0010082,2.27e-09,5;UBERON:0004111,4.95e-09,122;UBERON:0004733,5.17e-09,6;UBERON:0004732,5.17e-09,6;UBERON:0002028,5.17e-09,6;UBERON:0007277,5.17e-09,6;UBERON:0002780,5.33e-09,39;UBERON:0001890,5.33e-09,39;UBERON:0006240,5.33e-09,39;UBERON:0011216,1.08e-08,194;UBERON:0003528,1.21e-08,29;UBERON:0002791,1.21e-08,29;UBERON:0001893,1.21e-08,29;UBERON:0003056,4.72e-08,49;UBERON:0001896,1.81e-07,2;UBERON:0002298,1.81e-07,2;UBERON:0005290,1.81e-07,2;UBERON:0010096,1.81e-07,2;UBERON:0002256,8.04e-07,2|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,1.99955689082663,1.10434270475807,0.122490799214954,0,0,6.60695285996332,6.12899222808901,3.99376986466233,1.18697658957174,1.18933936683133,1.04182674111352,4.4669279840221,3.93933827022176,3.97275444219706,2.06240009831567,1.56608848879013,1.3047961207771,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.913396434936424,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.92780797011547,5.86450779077674,0,0,0,0,3.44518470631092,1.37250180845588,0.251308704225729,1.39059456153821,0.511430914660661,4.77912502486988,2.92034273521964,0,0,0,0.210441855886474,0.260240885925407,0,0,0.30140963567143,0.340182495756639,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85321415970701,2.93029216480508,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0,0,0.231768651889711,0,0,0.441596760403192,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421|short_description=p2@Chrnb2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:11444 | |||
|HGNC= | |||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8BGP7 | |||
|association_with_transcript=188bp_to_ENSMUST00000029562,NM_009602,uc008qaa.2_5end | |||
|cluster_id=chr3:89568354..89568365,- | |||
|description=CAGE_peak_2_at_Chrnb2_5end | |||
|id=chr3:89568354..89568365,- | |||
|ontology_enrichment_celltype=CL:0000540!2.70e-16!33;CL:0000047!2.70e-16!33;CL:0000031!2.70e-16!33;CL:0000404!2.70e-16!33;CL:0000117!5.24e-16!23;CL:0000337!5.24e-16!23;CL:0000393!1.94e-12!39;CL:0000211!1.94e-12!39;CL:0002319!2.01e-12!43;CL:0000221!6.17e-12!44;CL:0000133!6.17e-12!44;CL:0000055!1.86e-09!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.88e-31,23;CL:0000337,1.88e-31,23;CL:0000540,6.35e-21,33;CL:0000047,6.35e-21,33;CL:0000031,6.35e-21,33;CL:0000404,6.35e-21,33;CL:0000393,3.39e-17,39;CL:0000211,3.39e-17,39;CL:0002319,2.73e-15,43;CL:0000221,7.23e-15,44;CL:0000133,7.23e-15,44;CL:0002610,3.94e-11,3;CL:0002614,1.04e-10,3;CL:0002612,9.58e-10,3;CL:0002613,4.93e-09,3;CL:0002321,3.93e-08,70;CL:0002611,8.04e-07,2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!6.53e-31!73;UBERON:0005743!6.53e-31!73;UBERON:0000073!8.65e-31!75;UBERON:0001016!8.65e-31!75;UBERON:0004121!1.05e-29!102;UBERON:0000924!1.05e-29!102;UBERON:0006601!1.05e-29!102;UBERON:0002346!1.45e-28!71;UBERON:0003075!1.45e-28!71;UBERON:0007284!1.45e-28!71;UBERON:0000033!3.46e-24!63;UBERON:0001049!1.31e-23!52;UBERON:0005068!1.31e-23!52;UBERON:0006241!1.31e-23!52;UBERON:0007135!1.31e-23!52;UBERON:0000955!6.30e-22!50;UBERON:0006238!6.30e-22!50;UBERON:0002616!5.97e-21!49;UBERON:0003056!1.10e-18!49;UBERON:0002020!1.05e-15!34;UBERON:0003080!3.24e-15!40;UBERON:0002780!2.77e-14!39;UBERON:0001890!2.77e-14!39;UBERON:0006240!2.77e-14!39;UBERON:0007811!9.82e-14!86;UBERON:0000153!2.23e-11!94;UBERON:0002791!2.91e-11!29;UBERON:0003528!2.91e-11!29;UBERON:0001893!2.91e-11!29;UBERON:0003076!2.02e-09!12;UBERON:0003057!2.02e-09!12;UBERON:0002420!4.38e-09!8;UBERON:0007245!4.38e-09!8;UBERON:0010009!4.38e-09!8;UBERON:0010011!4.38e-09!8;UBERON:0000454!4.38e-09!8;UBERON:0002298!4.08e-08!6;UBERON:0002240!1.32e-07!6;UBERON:0005174!1.32e-07!6;UBERON:0001137!1.32e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,6.48e-32,54;UBERON:0001017,1.65e-31,73;UBERON:0001016,1.54e-30,75;UBERON:0001049,2.42e-27,52;UBERON:0005068,2.42e-27,52;UBERON:0006241,2.42e-27,52;UBERON:0007135,2.42e-27,52;UBERON:0003076,9.71e-25,12;UBERON:0003057,9.71e-25,12;UBERON:0004121,4.44e-23,95;UBERON:0000924,4.44e-23,95;UBERON:0006601,4.44e-23,95;UBERON:0002346,2.26e-21,64;UBERON:0003075,2.26e-21,64;UBERON:0007284,2.26e-21,64;UBERON:0010371,3.54e-18,73;UBERON:0002240,4.53e-18,6;UBERON:0005174,4.53e-18,6;UBERON:0001137,4.53e-18,6;UBERON:0002420,4.98e-18,8;UBERON:0007245,4.98e-18,8;UBERON:0010009,4.98e-18,8;UBERON:0010011,4.98e-18,8;UBERON:0000454,4.98e-18,8;UBERON:0000955,6.89e-18,47;UBERON:0006238,6.89e-18,47;UBERON:0002020,6.86e-17,34;UBERON:0002616,3.49e-16,46;UBERON:0001948,6.11e-15,5;UBERON:0002315,6.11e-15,5;UBERON:0002950,1.27e-13,4;UBERON:0001891,1.27e-13,4;UBERON:0009616,1.27e-13,4;UBERON:0010286,1.27e-13,4;UBERON:0010314,1.76e-13,92;UBERON:0004684,3.94e-11,3;UBERON:0002275,3.94e-11,3;UBERON:0002038,1.04e-10,3;UBERON:0009663,1.04e-10,3;UBERON:0009661,1.04e-10,3;UBERON:0000125,1.04e-10,3;UBERON:0002308,1.04e-10,3;UBERON:0003080,1.98e-10,40;UBERON:0000025,5.45e-10,114;UBERON:0002257,9.58e-10,3;UBERON:0000369,2.27e-09,5;UBERON:0002435,2.27e-09,5;UBERON:0000204,2.27e-09,5;UBERON:0010082,2.27e-09,5;UBERON:0004111,4.95e-09,122;UBERON:0004733,5.17e-09,6;UBERON:0004732,5.17e-09,6;UBERON:0002028,5.17e-09,6;UBERON:0007277,5.17e-09,6;UBERON:0002780,5.33e-09,39;UBERON:0001890,5.33e-09,39;UBERON:0006240,5.33e-09,39;UBERON:0011216,1.08e-08,194;UBERON:0003528,1.21e-08,29;UBERON:0002791,1.21e-08,29;UBERON:0001893,1.21e-08,29;UBERON:0003056,4.72e-08,49;UBERON:0001896,1.81e-07,2;UBERON:0002298,1.81e-07,2;UBERON:0005290,1.81e-07,2;UBERON:0010096,1.81e-07,2;UBERON:0002256,8.04e-07,2 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21389876515759,0.528990979272033,1.26766280701236,0,0,0,0,0,0.299600110518405,0,0.103689612308478,0.135005938331691,0,1.99955689082663,1.10434270475807,0.122490799214954,0,0,6.60695285996332,6.12899222808901,3.99376986466233,1.18697658957174,1.18933936683133,1.04182674111352,4.4669279840221,3.93933827022176,3.97275444219706,2.06240009831567,1.56608848879013,1.3047961207771,0,0.151143120213571,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0.148442139064825,0.173485326766136,0.913396434936424,0,0,0.117588707135705,0,0,0,0,0,0,0,0,2.92780797011547,5.86450779077674,0,0,0,0,3.44518470631092,1.37250180845588,0.251308704225729,1.39059456153821,0.511430914660661,4.77912502486988,2.92034273521964,0,0,0,0.210441855886474,0.260240885925407,0,0,0.30140963567143,0.340182495756639,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116765342367169,0,0,0,0,0,0,1.05144974282064,0.308713837137853,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.85321415970701,2.93029216480508,0,0,0,0.390438744296638,0.215423397732799,0,0.222798674082394,0,0.404810701674894,0,0.395287777946524,1.92792789853084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.18006109403131,0,0,0,0.178368817602071,0.329098041204242,0.608929898229199,0,0,0,0,0,0,0,0,0,5.00648315428376,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0.168956125490778,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.460325236507177,0,0.859265911718438,0.685082519770642,0,0,0.45032120322422,0.906284817968409,0.51776031175182,0,0.399024873401031,0.341467211508268,0.243106717068294,0.209613162627982,0,0,0.206035057238894,0.320919209591815,0,0.25347929989024,0,0.187283014939765,0.128050304809739,0,0,0.231768651889711,0,0,0.441596760403192,0,0,0,0.145346416632329,0.188218760830661,0.169229215783353,0.548783918618318,0.263069711437843,0,0,0.118635018124174,0.29551344712669,0,0.309873682371932,0,0,0,0,0.191288332068843,0.220591419119515,0.231867835620421 | |||
|short_description=p2@Chrnb2 | |||
}} |
Revision as of 05:14, 4 August 2015
Short description: | p2@Chrnb2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Chrnb2_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 188bp_to_ENSMUST00000029562, NM_009602, uc008qaa.2_5end |
EntrezGene: | 11444 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.88e-31 | 23 |
neuroblast (sensu Vertebrata) | 1.88e-31 | 23 |
neuron | 6.35e-21 | 33 |
neuronal stem cell | 6.35e-21 | 33 |
neuroblast | 6.35e-21 | 33 |
electrically signaling cell | 6.35e-21 | 33 |
electrically responsive cell | 3.39e-17 | 39 |
electrically active cell | 3.39e-17 | 39 |
neural cell | 2.73e-15 | 43 |
ectodermal cell | 7.23e-15 | 44 |
neurectodermal cell | 7.23e-15 | 44 |
raphe nuclei neuron | 3.94e-11 | 3 |
neuron of the substantia nigra | 1.04e-10 | 3 |
neuron of the ventral spinal cord | 9.58e-10 | 3 |
striatum neuron | 4.93e-09 | 3 |
embryonic cell | 3.93e-08 | 70 |
neuron of the dorsal spinal cord | 8.04e-07 | 2 |