FFCP PHASE1:Mm9::chr9:10904853..10904864,-: Difference between revisions
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{{FFCP|EntrezGene=244682|HGNC=|MCL_coexpression_id=13|UniProt=P68500|association_with_transcript=-78bp_to_ENSMUST00000160216,NM_001170787,uc009odr.2,uc012goa.1_5end|description=CAGE_peak_5_at_Cntn5_5end|id=chr9:10904853..10904864,-|ontology_enrichment_celltype=CL:0000117!1.37e-19!23;CL:0000337!1.37e-19!23;CL:0000540!2.82e-14!33;CL:0000047!2.82e-14!33;CL:0000031!2.82e-14!33;CL:0000404!2.82e-14!33;CL:0000393!1.11e-10!39;CL:0000211!1.11e-10!39;CL:0000221!3.82e-10!44;CL:0000133!3.82e-10!44;CL:0002319!1.36e-09!43;CL:0000055!4.44e-07!50|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-27,23;CL:0000337,1.39e-27,23;CL:0000540,1.47e-18,33;CL:0000047,1.47e-18,33;CL:0000031,1.47e-18,33;CL:0000404,1.47e-18,33;CL:0000393,2.31e-15,39;CL:0000211,2.31e-15,39;CL:0002319,1.00e-13,43;CL:0002614,2.19e-13,3;CL:0000221,2.32e-13,44;CL:0000133,2.32e-13,44;CL:0002610,3.22e-12,3;CL:0002321,1.47e-07,70|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!4.05e-25!73;UBERON:0005743!4.05e-25!73;UBERON:0001049!3.03e-24!52;UBERON:0005068!3.03e-24!52;UBERON:0006241!3.03e-24!52;UBERON:0007135!3.03e-24!52;UBERON:0000033!3.52e-24!63;UBERON:0000073!6.13e-24!75;UBERON:0001016!6.13e-24!75;UBERON:0002020!7.62e-24!34;UBERON:0000955!2.86e-23!50;UBERON:0006238!2.86e-23!50;UBERON:0002616!2.22e-22!49;UBERON:0003056!2.97e-22!49;UBERON:0002346!1.62e-21!71;UBERON:0003075!1.62e-21!71;UBERON:0007284!1.62e-21!71;UBERON:0003080!2.17e-21!40;UBERON:0002780!2.11e-20!39;UBERON:0001890!2.11e-20!39;UBERON:0006240!2.11e-20!39;UBERON:0004121!3.27e-20!102;UBERON:0000924!3.27e-20!102;UBERON:0006601!3.27e-20!102;UBERON:0002791!1.69e-19!29;UBERON:0003528!1.69e-19!29;UBERON:0001893!1.69e-19!29;UBERON:0007811!5.47e-14!86;UBERON:0000153!4.01e-13!94;UBERON:0000956!2.13e-12!21;UBERON:0001869!2.13e-12!21;UBERON:0000203!2.13e-12!21;UBERON:0002619!2.53e-10!17;UBERON:0002420!1.51e-08!8;UBERON:0007245!1.51e-08!8;UBERON:0010009!1.51e-08!8;UBERON:0010011!1.51e-08!8;UBERON:0000454!1.51e-08!8;UBERON:0002021!2.38e-08!10;UBERON:0000411!2.38e-08!10;UBERON:0001950!2.38e-08!10;UBERON:0002298!8.66e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.66e-28,34;UBERON:0000073,3.68e-27,54;UBERON:0003528,6.59e-22,29;UBERON:0002791,6.59e-22,29;UBERON:0001893,6.59e-22,29;UBERON:0001017,1.60e-21,73;UBERON:0001016,7.32e-21,75;UBERON:0001049,4.61e-20,52;UBERON:0005068,4.61e-20,52;UBERON:0006241,4.61e-20,52;UBERON:0007135,4.61e-20,52;UBERON:0002420,4.00e-18,8;UBERON:0007245,4.00e-18,8;UBERON:0010009,4.00e-18,8;UBERON:0010011,4.00e-18,8;UBERON:0000454,4.00e-18,8;UBERON:0003080,6.98e-18,40;UBERON:0002950,3.51e-17,4;UBERON:0001891,3.51e-17,4;UBERON:0009616,3.51e-17,4;UBERON:0010286,3.51e-17,4;UBERON:0004121,8.68e-16,95;UBERON:0000924,8.68e-16,95;UBERON:0006601,8.68e-16,95;UBERON:0002346,9.35e-16,64;UBERON:0003075,9.35e-16,64;UBERON:0007284,9.35e-16,64;UBERON:0002780,1.03e-15,39;UBERON:0001890,1.03e-15,39;UBERON:0006240,1.03e-15,39;UBERON:0002616,3.13e-15,46;UBERON:0000955,7.46e-15,47;UBERON:0006238,7.46e-15,47;UBERON:0003056,3.80e-14,49;UBERON:0010371,1.89e-13,73;UBERON:0002038,2.19e-13,3;UBERON:0009663,2.19e-13,3;UBERON:0009661,2.19e-13,3;UBERON:0000125,2.19e-13,3;UBERON:0002308,2.19e-13,3;UBERON:0004684,3.22e-12,3;UBERON:0002275,3.22e-12,3;UBERON:0002021,1.40e-10,10;UBERON:0000411,1.40e-10,10;UBERON:0001950,1.40e-10,10;UBERON:0010314,4.69e-10,92;UBERON:0000956,6.18e-09,21;UBERON:0001869,6.18e-09,21;UBERON:0000203,6.18e-09,21;UBERON:0002619,1.71e-08,17;UBERON:0001948,8.25e-08,5;UBERON:0002315,8.25e-08,5;UBERON:0000369,9.70e-08,5;UBERON:0002435,9.70e-08,5;UBERON:0000204,9.70e-08,5;UBERON:0010082,9.70e-08,5;UBERON:0000025,1.58e-07,114;UBERON:0004111,7.80e-07,122|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.210324961351382,0.285650984403804,1.10434270475807,1.22490799214954,0.766763768145891,0.919218786610021,1.10115880999389,1.27687338085188,1.0752457327937,1.58263545276233,1.46380229763855,0.52091337055676,1.11673199600552,2.25105044012672,2.44477196442896,1.17851434189467,0.854230084794618,1.86399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.457500602818626,1.00523481690292,1.04294592115366,1.79000820131231,0.62336413367868,0.648965052271031,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.640568601424249,0.374806898238915,0.776110112217047,0,0,0,0,0.834141747676794,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:244682 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P68500 | |||
|association_with_transcript=-78bp_to_ENSMUST00000160216,NM_001170787,uc009odr.2,uc012goa.1_5end | |||
|cluster_id=chr9:10904853..10904864,- | |||
|description=CAGE_peak_5_at_Cntn5_5end | |||
|id=chr9:10904853..10904864,- | |||
|ontology_enrichment_celltype=CL:0000117!1.37e-19!23;CL:0000337!1.37e-19!23;CL:0000540!2.82e-14!33;CL:0000047!2.82e-14!33;CL:0000031!2.82e-14!33;CL:0000404!2.82e-14!33;CL:0000393!1.11e-10!39;CL:0000211!1.11e-10!39;CL:0000221!3.82e-10!44;CL:0000133!3.82e-10!44;CL:0002319!1.36e-09!43;CL:0000055!4.44e-07!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.39e-27,23;CL:0000337,1.39e-27,23;CL:0000540,1.47e-18,33;CL:0000047,1.47e-18,33;CL:0000031,1.47e-18,33;CL:0000404,1.47e-18,33;CL:0000393,2.31e-15,39;CL:0000211,2.31e-15,39;CL:0002319,1.00e-13,43;CL:0002614,2.19e-13,3;CL:0000221,2.32e-13,44;CL:0000133,2.32e-13,44;CL:0002610,3.22e-12,3;CL:0002321,1.47e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!4.05e-25!73;UBERON:0005743!4.05e-25!73;UBERON:0001049!3.03e-24!52;UBERON:0005068!3.03e-24!52;UBERON:0006241!3.03e-24!52;UBERON:0007135!3.03e-24!52;UBERON:0000033!3.52e-24!63;UBERON:0000073!6.13e-24!75;UBERON:0001016!6.13e-24!75;UBERON:0002020!7.62e-24!34;UBERON:0000955!2.86e-23!50;UBERON:0006238!2.86e-23!50;UBERON:0002616!2.22e-22!49;UBERON:0003056!2.97e-22!49;UBERON:0002346!1.62e-21!71;UBERON:0003075!1.62e-21!71;UBERON:0007284!1.62e-21!71;UBERON:0003080!2.17e-21!40;UBERON:0002780!2.11e-20!39;UBERON:0001890!2.11e-20!39;UBERON:0006240!2.11e-20!39;UBERON:0004121!3.27e-20!102;UBERON:0000924!3.27e-20!102;UBERON:0006601!3.27e-20!102;UBERON:0002791!1.69e-19!29;UBERON:0003528!1.69e-19!29;UBERON:0001893!1.69e-19!29;UBERON:0007811!5.47e-14!86;UBERON:0000153!4.01e-13!94;UBERON:0000956!2.13e-12!21;UBERON:0001869!2.13e-12!21;UBERON:0000203!2.13e-12!21;UBERON:0002619!2.53e-10!17;UBERON:0002420!1.51e-08!8;UBERON:0007245!1.51e-08!8;UBERON:0010009!1.51e-08!8;UBERON:0010011!1.51e-08!8;UBERON:0000454!1.51e-08!8;UBERON:0002021!2.38e-08!10;UBERON:0000411!2.38e-08!10;UBERON:0001950!2.38e-08!10;UBERON:0002298!8.66e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.66e-28,34;UBERON:0000073,3.68e-27,54;UBERON:0003528,6.59e-22,29;UBERON:0002791,6.59e-22,29;UBERON:0001893,6.59e-22,29;UBERON:0001017,1.60e-21,73;UBERON:0001016,7.32e-21,75;UBERON:0001049,4.61e-20,52;UBERON:0005068,4.61e-20,52;UBERON:0006241,4.61e-20,52;UBERON:0007135,4.61e-20,52;UBERON:0002420,4.00e-18,8;UBERON:0007245,4.00e-18,8;UBERON:0010009,4.00e-18,8;UBERON:0010011,4.00e-18,8;UBERON:0000454,4.00e-18,8;UBERON:0003080,6.98e-18,40;UBERON:0002950,3.51e-17,4;UBERON:0001891,3.51e-17,4;UBERON:0009616,3.51e-17,4;UBERON:0010286,3.51e-17,4;UBERON:0004121,8.68e-16,95;UBERON:0000924,8.68e-16,95;UBERON:0006601,8.68e-16,95;UBERON:0002346,9.35e-16,64;UBERON:0003075,9.35e-16,64;UBERON:0007284,9.35e-16,64;UBERON:0002780,1.03e-15,39;UBERON:0001890,1.03e-15,39;UBERON:0006240,1.03e-15,39;UBERON:0002616,3.13e-15,46;UBERON:0000955,7.46e-15,47;UBERON:0006238,7.46e-15,47;UBERON:0003056,3.80e-14,49;UBERON:0010371,1.89e-13,73;UBERON:0002038,2.19e-13,3;UBERON:0009663,2.19e-13,3;UBERON:0009661,2.19e-13,3;UBERON:0000125,2.19e-13,3;UBERON:0002308,2.19e-13,3;UBERON:0004684,3.22e-12,3;UBERON:0002275,3.22e-12,3;UBERON:0002021,1.40e-10,10;UBERON:0000411,1.40e-10,10;UBERON:0001950,1.40e-10,10;UBERON:0010314,4.69e-10,92;UBERON:0000956,6.18e-09,21;UBERON:0001869,6.18e-09,21;UBERON:0000203,6.18e-09,21;UBERON:0002619,1.71e-08,17;UBERON:0001948,8.25e-08,5;UBERON:0002315,8.25e-08,5;UBERON:0000369,9.70e-08,5;UBERON:0002435,9.70e-08,5;UBERON:0000204,9.70e-08,5;UBERON:0010082,9.70e-08,5;UBERON:0000025,1.58e-07,114;UBERON:0004111,7.80e-07,122 | |||
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,1.26766280701236,0,0,0,0,0,0,0,0.518448061542388,0.135005938331691,0.210324961351382,0.285650984403804,1.10434270475807,1.22490799214954,0.766763768145891,0.919218786610021,1.10115880999389,1.27687338085188,1.0752457327937,1.58263545276233,1.46380229763855,0.52091337055676,1.11673199600552,2.25105044012672,2.44477196442896,1.17851434189467,0.854230084794618,1.86399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0.563373679106722,0,0,0,0,0,0,0.11418387971906,0,0,0.346970653532272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49790639404823,0.457500602818626,1.00523481690292,1.04294592115366,1.79000820131231,0.62336413367868,0.648965052271031,0.101839363850316,0,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.640568601424249,0.374806898238915,0.776110112217047,0,0,0,0,0.834141747676794,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0.329119699826961,0,0,0,0,0,0.630869845692382,0.720332286654991,0,0,0,0,0,0,0.22237804384487,0,0,0.164698954724011,0,0,0,0,0,0,0.189667900953082,0.114248512609729,0,0,0,0.0701358198903186,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.481651769963376,0.586058432961016,0,0,0,0,0.215423397732799,0,0,0,0.404810701674894,0,0,0.963963949265421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0.354680467284547,0.178368817602071,0.164549020602121,0,0,0,0,0,0,0.0603129249281559,0,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202725215290164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0.920650473014354,0.572895513439397,2.23409137046794,2.05524755931193,0.755393897389701,0.675022500231806,1.80128481289688,0,2.5888015587591,0,0.399024873401031,0.341467211508268,0,0,0.183843508450014,0,0.412070114477788,0,0.252697211763798,0.50695859978048,0.565879024158229,0.37456602987953,0.704276676453562,0.34461281373368,0.476293691283074,0.579421629724277,0.192909220463705,0.412085900803307,0.294397840268795,0,0.887379030796687,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.365855945745545,0.526139422875686,0.407412341537585,0,0.355905054372522,0.788035859004508,0,0.619747364743864,0.578719832943424,0.499621155875892,0.935726433781634,0.214871054048298,0,0,0 | |||
|short_description=p5@Cntn5 | |||
}} |
Revision as of 14:27, 4 August 2015
Short description: | p5@Cntn5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Cntn5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | -78bp_to_ENSMUST00000160216, NM_001170787, uc009odr.2, uc012goa.1_5end |
EntrezGene: | 244682 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.39e-27 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-27 | 23 |
neuron | 1.47e-18 | 33 |
neuronal stem cell | 1.47e-18 | 33 |
neuroblast | 1.47e-18 | 33 |
electrically signaling cell | 1.47e-18 | 33 |
electrically responsive cell | 2.31e-15 | 39 |
electrically active cell | 2.31e-15 | 39 |
neural cell | 1.00e-13 | 43 |
neuron of the substantia nigra | 2.19e-13 | 3 |
ectodermal cell | 2.32e-13 | 44 |
neurectodermal cell | 2.32e-13 | 44 |
raphe nuclei neuron | 3.22e-12 | 3 |
embryonic cell | 1.47e-07 | 70 |