FFCP PHASE1:Mm9::chr10:80945400..80945470,-: Difference between revisions
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{{FFCP|EntrezGene=319586|HGNC=|MCL_coexpression_id=13|UniProt=D3Z4T1,D3Z580|association_with_transcript=0bp_to_ENSMUST00000118763,ENSMUST00000120508,ENSMUST00000128494,NM_176954,uc007gid.2,uc007gie.2_5end|description=CAGE_peak_1_at_Celf5_5end|id=chr10:80945400..80945470,-|ontology_enrichment_celltype=CL:0000393!6.71e-15!39;CL:0000211!6.71e-15!39;CL:0000540!1.27e-14!33;CL:0000047!1.27e-14!33;CL:0000031!1.27e-14!33;CL:0000404!1.27e-14!33;CL:0000117!3.10e-14!23;CL:0000337!3.10e-14!23;CL:0002319!2.42e-12!43;CL:0000221!2.92e-12!44;CL:0000133!2.92e-12!44;CL:0000055!3.12e-12!50|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-17,23;CL:0000337,2.37e-17,23;CL:0000540,3.30e-16,33;CL:0000047,3.30e-16,33;CL:0000031,3.30e-16,33;CL:0000404,3.30e-16,33;CL:0000393,1.31e-15,39;CL:0000211,1.31e-15,39;CL:0002319,2.26e-12,43;CL:0000221,8.41e-12,44;CL:0000133,8.41e-12,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001017!2.91e-30!73;UBERON:0005743!2.91e-30!73;UBERON:0000073!4.05e-29!75;UBERON:0001016!4.05e-29!75;UBERON:0002346!1.06e-26!71;UBERON:0003075!1.06e-26!71;UBERON:0007284!1.06e-26!71;UBERON:0004121!3.69e-25!102;UBERON:0000924!3.69e-25!102;UBERON:0006601!3.69e-25!102;UBERON:0001049!3.94e-25!52;UBERON:0005068!3.94e-25!52;UBERON:0006241!3.94e-25!52;UBERON:0007135!3.94e-25!52;UBERON:0000955!5.97e-24!50;UBERON:0006238!5.97e-24!50;UBERON:0000033!8.12e-24!63;UBERON:0002616!2.79e-23!49;UBERON:0003056!1.13e-21!49;UBERON:0002020!3.24e-20!34;UBERON:0003080!7.84e-20!40;UBERON:0002780!2.84e-19!39;UBERON:0001890!2.84e-19!39;UBERON:0006240!2.84e-19!39;UBERON:0002791!2.09e-17!29;UBERON:0003528!2.09e-17!29;UBERON:0001893!2.09e-17!29;UBERON:0007811!1.69e-12!86;UBERON:0000956!2.09e-12!21;UBERON:0001869!2.09e-12!21;UBERON:0000203!2.09e-12!21;UBERON:0000153!2.91e-11!94;UBERON:0002619!4.82e-10!17;UBERON:0002021!3.91e-08!10;UBERON:0000411!3.91e-08!10;UBERON:0001950!3.91e-08!10|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.55e-34,73;UBERON:0001016,1.61e-32,75;UBERON:0002346,2.57e-31,64;UBERON:0003075,2.57e-31,64;UBERON:0007284,2.57e-31,64;UBERON:0000073,1.61e-30,54;UBERON:0001049,4.63e-29,52;UBERON:0005068,4.63e-29,52;UBERON:0006241,4.63e-29,52;UBERON:0007135,4.63e-29,52;UBERON:0004121,1.90e-27,95;UBERON:0000924,1.90e-27,95;UBERON:0006601,1.90e-27,95;UBERON:0000955,1.38e-25,47;UBERON:0006238,1.38e-25,47;UBERON:0002616,8.87e-25,46;UBERON:0003056,8.92e-25,49;UBERON:0010371,2.15e-24,73;UBERON:0002020,1.19e-23,34;UBERON:0003080,2.90e-23,40;UBERON:0002780,1.43e-22,39;UBERON:0001890,1.43e-22,39;UBERON:0006240,1.43e-22,39;UBERON:0003528,3.70e-20,29;UBERON:0002791,3.70e-20,29;UBERON:0001893,3.70e-20,29;UBERON:0010314,1.59e-17,92;UBERON:0000956,5.68e-14,21;UBERON:0001869,5.68e-14,21;UBERON:0000203,5.68e-14,21;UBERON:0002619,4.68e-11,17;UBERON:0002021,9.42e-10,10;UBERON:0000411,9.42e-10,10;UBERON:0001950,9.42e-10,10;UBERON:0002420,2.11e-07,8;UBERON:0007245,2.11e-07,8;UBERON:0010009,2.11e-07,8;UBERON:0010011,2.11e-07,8;UBERON:0000454,2.11e-07,8|phase1_expression=0.960893082628764,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9911039113008,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,8.43508680436368,9.0225468785368,3.30384153891027,2.34717403304412,0.65407546914134,0.219686182734472,0.388859798148567,1.25987779462826,0,0,0,0,0.257259436035947,0.573066879877513,2.06268836910977,72.6316094485956,81.9936017871651,74.7921056137291,12.876092218627,6.22506357277798,0,0,0,4.79360176829448,1.92109152660777,55.8887010342695,57.2425178526368,51.3192905697372,22.5664277679005,26.283356373242,55.4883320443742,57.986509966033,63.4260962760914,17.6185409599022,24.515968912356,16.5895055916743,90.6058796706432,77.3985464876386,74.4906119896167,13.6799669510677,21.3849791812038,24.7533161398432,35.9446874277875,36.1624069229721,54.6150376268131,0,0.453429360640713,0,0,0,0,0,0,2.52799956237153,3.2381761289831,3.63700406444016,2.12003744706204,0.563373679106722,5.13305909657271,7.64415719119937,7.11066703153331,0,0.253359865475099,0,0.34255163915718,0,0.890652834388949,0.867426633830679,1.82679286987285,1.84492397804847,1.95939432718409,1.88141931417128,0,0,0.144599356919912,0,0,0,0,1.86391761218122,22.5441213698891,30.1603257811375,0,0,0,0,26.6627338140584,78.6901036848038,109.067977633966,75.2659306432557,87.7104018643034,28.2591740601002,49.6458264987338,0.305518091550949,0.124406970610093,0,2.52530227063769,0.910843100738926,2.98872735763515,4.14142898552303,7.38453607395004,10.6136938676071,9.48041530107888,8.90166383317424,7.76110112217047,0,1.13463648100692,0.879755620819744,0.876782929710299,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,77.596991020163,70.180945642672,0.330418782983798,0,0.639864751605702,0.696710015581316,1.41754207454303,1.21010114774006,1.11189021922435,0.951128130562796,0,0.164698954724011,0.251335208800269,0.397912944082302,1.16978452271472,0,0.216138049874694,0.199141273254367,0.379335801906163,0.571242563048644,0,0.407302655690628,0,0.420814919341911,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0.275936746304732,9.31193421929193,12.4244387787735,5.24591825205361,0,2.83957397474631,2.34263246577983,2.80050417052639,0.955875191810208,2.67358408898873,1.69845918473299,4.45291771842384,7.89090816360542,8.30104333687699,64.906905917205,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0,0,0,1.03135543248187,3.40439605753788,2.52085531643834,3.75140182969988,1.28602221018955,5.67488747655275,4.28085162244969,4.27827453565514,7.00269382963578,0,0,0.441056796109924,0.49465875882444,0,0.301564624640779,0,0,0.291480836629851,12.0526446306831,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,1.10717597753397,0.813277868507395,0.540026704109006,1.46361807210128,0.655087691238533,0.269728692769641,0.991841468704031,0,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0.337912250981556,0.234714477291508,0.2604087696879,0.524296722128554,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,3.10780334723691,2.69141569828427,2.51826924546118,0,0.187682475451182,0.36630324853453,0.428736758158132,0,84.1480245499429,81.4775668617703,83.0698494487125,83.3487934366885,65.7679218979817,83.093328712867,68.1772725234124,81.0578165803597,67.5182189386465,78.1818070745248,2.07574695168353,15.5619700626402,11.2684179797729,11.1829089851415,12.5767897576789,12.869045591501,8.88986911206461,9.06554251851134,11.8740107548972,5.55933865880354,9.63221339582911,7.9223063382152,8.42773567228942,10.8202507564229,11.3722228532114,15.2413981210584,11.1248952907061,9.64546102318525,9.06588981767275,8.83193520806384,7.88599280486455,6.03417740941747,8.34526664815623,6.54058874845478,7.71696919405711,8.96914843651771,8.41468675214754,9.73357932320019,8.55565917228929,3.36685362994643,9.49080144993393,10.5399796141853,3.27384834535751,8.98633678878603,11.9602098808308,27.4791635731741,7.95367468714389,10.3138105943183,4.3996316375834,0.441182838239031,0.695603506861264|short_description=p1@Celf5}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:319586 | |||
|HGNC= | |||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:D3Z4T1,uniprot:D3Z580 | |||
|association_with_transcript=0bp_to_ENSMUST00000118763,ENSMUST00000120508,ENSMUST00000128494,NM_176954,uc007gid.2,uc007gie.2_5end | |||
|cluster_id=chr10:80945400..80945470,- | |||
|description=CAGE_peak_1_at_Celf5_5end | |||
|id=chr10:80945400..80945470,- | |||
|ontology_enrichment_celltype=CL:0000393!6.71e-15!39;CL:0000211!6.71e-15!39;CL:0000540!1.27e-14!33;CL:0000047!1.27e-14!33;CL:0000031!1.27e-14!33;CL:0000404!1.27e-14!33;CL:0000117!3.10e-14!23;CL:0000337!3.10e-14!23;CL:0002319!2.42e-12!43;CL:0000221!2.92e-12!44;CL:0000133!2.92e-12!44;CL:0000055!3.12e-12!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.37e-17,23;CL:0000337,2.37e-17,23;CL:0000540,3.30e-16,33;CL:0000047,3.30e-16,33;CL:0000031,3.30e-16,33;CL:0000404,3.30e-16,33;CL:0000393,1.31e-15,39;CL:0000211,1.31e-15,39;CL:0002319,2.26e-12,43;CL:0000221,8.41e-12,44;CL:0000133,8.41e-12,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.91e-30!73;UBERON:0005743!2.91e-30!73;UBERON:0000073!4.05e-29!75;UBERON:0001016!4.05e-29!75;UBERON:0002346!1.06e-26!71;UBERON:0003075!1.06e-26!71;UBERON:0007284!1.06e-26!71;UBERON:0004121!3.69e-25!102;UBERON:0000924!3.69e-25!102;UBERON:0006601!3.69e-25!102;UBERON:0001049!3.94e-25!52;UBERON:0005068!3.94e-25!52;UBERON:0006241!3.94e-25!52;UBERON:0007135!3.94e-25!52;UBERON:0000955!5.97e-24!50;UBERON:0006238!5.97e-24!50;UBERON:0000033!8.12e-24!63;UBERON:0002616!2.79e-23!49;UBERON:0003056!1.13e-21!49;UBERON:0002020!3.24e-20!34;UBERON:0003080!7.84e-20!40;UBERON:0002780!2.84e-19!39;UBERON:0001890!2.84e-19!39;UBERON:0006240!2.84e-19!39;UBERON:0002791!2.09e-17!29;UBERON:0003528!2.09e-17!29;UBERON:0001893!2.09e-17!29;UBERON:0007811!1.69e-12!86;UBERON:0000956!2.09e-12!21;UBERON:0001869!2.09e-12!21;UBERON:0000203!2.09e-12!21;UBERON:0000153!2.91e-11!94;UBERON:0002619!4.82e-10!17;UBERON:0002021!3.91e-08!10;UBERON:0000411!3.91e-08!10;UBERON:0001950!3.91e-08!10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.55e-34,73;UBERON:0001016,1.61e-32,75;UBERON:0002346,2.57e-31,64;UBERON:0003075,2.57e-31,64;UBERON:0007284,2.57e-31,64;UBERON:0000073,1.61e-30,54;UBERON:0001049,4.63e-29,52;UBERON:0005068,4.63e-29,52;UBERON:0006241,4.63e-29,52;UBERON:0007135,4.63e-29,52;UBERON:0004121,1.90e-27,95;UBERON:0000924,1.90e-27,95;UBERON:0006601,1.90e-27,95;UBERON:0000955,1.38e-25,47;UBERON:0006238,1.38e-25,47;UBERON:0002616,8.87e-25,46;UBERON:0003056,8.92e-25,49;UBERON:0010371,2.15e-24,73;UBERON:0002020,1.19e-23,34;UBERON:0003080,2.90e-23,40;UBERON:0002780,1.43e-22,39;UBERON:0001890,1.43e-22,39;UBERON:0006240,1.43e-22,39;UBERON:0003528,3.70e-20,29;UBERON:0002791,3.70e-20,29;UBERON:0001893,3.70e-20,29;UBERON:0010314,1.59e-17,92;UBERON:0000956,5.68e-14,21;UBERON:0001869,5.68e-14,21;UBERON:0000203,5.68e-14,21;UBERON:0002619,4.68e-11,17;UBERON:0002021,9.42e-10,10;UBERON:0000411,9.42e-10,10;UBERON:0001950,9.42e-10,10;UBERON:0002420,2.11e-07,8;UBERON:0007245,2.11e-07,8;UBERON:0010009,2.11e-07,8;UBERON:0010011,2.11e-07,8;UBERON:0000454,2.11e-07,8 | |||
|phase1_expression=0.960893082628764,0,0,0,0,0,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9911039113008,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0,0.588231488031014,0,0,8.43508680436368,9.0225468785368,3.30384153891027,2.34717403304412,0.65407546914134,0.219686182734472,0.388859798148567,1.25987779462826,0,0,0,0,0.257259436035947,0.573066879877513,2.06268836910977,72.6316094485956,81.9936017871651,74.7921056137291,12.876092218627,6.22506357277798,0,0,0,4.79360176829448,1.92109152660777,55.8887010342695,57.2425178526368,51.3192905697372,22.5664277679005,26.283356373242,55.4883320443742,57.986509966033,63.4260962760914,17.6185409599022,24.515968912356,16.5895055916743,90.6058796706432,77.3985464876386,74.4906119896167,13.6799669510677,21.3849791812038,24.7533161398432,35.9446874277875,36.1624069229721,54.6150376268131,0,0.453429360640713,0,0,0,0,0,0,2.52799956237153,3.2381761289831,3.63700406444016,2.12003744706204,0.563373679106722,5.13305909657271,7.64415719119937,7.11066703153331,0,0.253359865475099,0,0.34255163915718,0,0.890652834388949,0.867426633830679,1.82679286987285,1.84492397804847,1.95939432718409,1.88141931417128,0,0,0.144599356919912,0,0,0,0,1.86391761218122,22.5441213698891,30.1603257811375,0,0,0,0,26.6627338140584,78.6901036848038,109.067977633966,75.2659306432557,87.7104018643034,28.2591740601002,49.6458264987338,0.305518091550949,0.124406970610093,0,2.52530227063769,0.910843100738926,2.98872735763515,4.14142898552303,7.38453607395004,10.6136938676071,9.48041530107888,8.90166383317424,7.76110112217047,0,1.13463648100692,0.879755620819744,0.876782929710299,0.556094498451196,0,0.411564272815887,0.796137067273973,0,0,0,0.207125772535502,0.234526059981096,0,0,0.196764231747404,0,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0,0.243206428637567,0.146199987425332,0.439100230582101,0.134206418760372,77.596991020163,70.180945642672,0.330418782983798,0,0.639864751605702,0.696710015581316,1.41754207454303,1.21010114774006,1.11189021922435,0.951128130562796,0,0.164698954724011,0.251335208800269,0.397912944082302,1.16978452271472,0,0.216138049874694,0.199141273254367,0.379335801906163,0.571242563048644,0,0.407302655690628,0,0.420814919341911,0,0,0.156998727841375,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0.37898282354097,0,0,0,0.167506257441816,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0,0.289298117163023,0,0,0,0.275936746304732,9.31193421929193,12.4244387787735,5.24591825205361,0,2.83957397474631,2.34263246577983,2.80050417052639,0.955875191810208,2.67358408898873,1.69845918473299,4.45291771842384,7.89090816360542,8.30104333687699,64.906905917205,0.141940085208269,0.178065603667255,0.162886959353576,0.164970122972535,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0,0,0,0,0,0,1.03135543248187,3.40439605753788,2.52085531643834,3.75140182969988,1.28602221018955,5.67488747655275,4.28085162244969,4.27827453565514,7.00269382963578,0,0,0.441056796109924,0.49465875882444,0,0.301564624640779,0,0,0.291480836629851,12.0526446306831,0,0.412773735926445,0,0.188368457004691,0,0,0,0,0,0,1.10717597753397,0.813277868507395,0.540026704109006,1.46361807210128,0.655087691238533,0.269728692769641,0.991841468704031,0,0.129614973291793,0,0,0.149516546043979,0,0,0.258319646955462,0.337912250981556,0.234714477291508,0.2604087696879,0.524296722128554,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0,3.10780334723691,2.69141569828427,2.51826924546118,0,0.187682475451182,0.36630324853453,0.428736758158132,0,84.1480245499429,81.4775668617703,83.0698494487125,83.3487934366885,65.7679218979817,83.093328712867,68.1772725234124,81.0578165803597,67.5182189386465,78.1818070745248,2.07574695168353,15.5619700626402,11.2684179797729,11.1829089851415,12.5767897576789,12.869045591501,8.88986911206461,9.06554251851134,11.8740107548972,5.55933865880354,9.63221339582911,7.9223063382152,8.42773567228942,10.8202507564229,11.3722228532114,15.2413981210584,11.1248952907061,9.64546102318525,9.06588981767275,8.83193520806384,7.88599280486455,6.03417740941747,8.34526664815623,6.54058874845478,7.71696919405711,8.96914843651771,8.41468675214754,9.73357932320019,8.55565917228929,3.36685362994643,9.49080144993393,10.5399796141853,3.27384834535751,8.98633678878603,11.9602098808308,27.4791635731741,7.95367468714389,10.3138105943183,4.3996316375834,0.441182838239031,0.695603506861264 | |||
|short_description=p1@Celf5 | |||
}} |
Revision as of 21:29, 4 August 2015
Short description: | p1@Celf5 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Celf5_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000118763, ENSMUST00000120508, ENSMUST00000128494, NM_176954, uc007gid.2, uc007gie.2_5end |
EntrezGene: | 319586 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.37e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.37e-17 | 23 |
neuron | 3.30e-16 | 33 |
neuronal stem cell | 3.30e-16 | 33 |
neuroblast | 3.30e-16 | 33 |
electrically signaling cell | 3.30e-16 | 33 |
electrically responsive cell | 1.31e-15 | 39 |
electrically active cell | 1.31e-15 | 39 |
neural cell | 2.26e-12 | 43 |
ectodermal cell | 8.41e-12 | 44 |
neurectodermal cell | 8.41e-12 | 44 |