Personal tools

FFCP PHASE1:Mm9::chr9:49376574..49376610,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=87
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr9:49376574..49376610,-
|description=CAGE_peak_at_chr9:49376574..49376610,-
|description=CAGE_peak_at_chr9:49376574..49376610,-
|id=chr9:49376574..49376610,-
|id=chr9:49376574..49376610,-
|ontology_enrichment_celltype=CL:0000540!9.87e-21!33;CL:0000047!9.87e-21!33;CL:0000031!9.87e-21!33;CL:0000404!9.87e-21!33;CL:0002319!2.48e-19!43;CL:0000221!4.81e-19!44;CL:0000133!4.81e-19!44;CL:0000393!4.56e-18!39;CL:0000211!4.56e-18!39;CL:0000117!1.21e-17!23;CL:0000337!1.21e-17!23;CL:0000055!1.18e-16!50;CL:0002321!2.70e-07!70;CL:0000220!2.70e-07!70
|ontology_enrichment_celltype=CL:0000540!9.87e-21!33;CL:0000047!9.87e-21!33;CL:0000031!9.87e-21!33;CL:0000404!9.87e-21!33;CL:0002319!2.48e-19!43;CL:0000221!4.81e-19!44;CL:0000133!4.81e-19!44;CL:0000393!4.56e-18!39;CL:0000211!4.56e-18!39;CL:0000117!1.21e-17!23;CL:0000337!1.21e-17!23;CL:0000055!1.18e-16!50;CL:0002321!2.70e-07!70;CL:0000220!2.70e-07!70
|ontology_enrichment_celltype_v019_2=CL:0000540,1.22e-35,33;CL:0000047,1.22e-35,33;CL:0000031,1.22e-35,33;CL:0000404,1.22e-35,33;CL:0000117,6.30e-33,23;CL:0000337,6.30e-33,23;CL:0002319,8.64e-33,43;CL:0000221,8.46e-32,44;CL:0000133,8.46e-32,44;CL:0000393,1.19e-28,39;CL:0000211,1.19e-28,39;CL:0002321,4.30e-16,70;CL:0002609,4.88e-09,6;CL:0000723,1.16e-08,91;CL:0000048,1.16e-08,91;CL:0000034,1.36e-07,97
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.75e-29!73;UBERON:0005743!3.75e-29!73;UBERON:0000073!5.56e-29!75;UBERON:0001016!5.56e-29!75;UBERON:0004121!2.29e-27!102;UBERON:0000924!2.29e-27!102;UBERON:0006601!2.29e-27!102;UBERON:0002346!1.44e-24!71;UBERON:0003075!1.44e-24!71;UBERON:0007284!1.44e-24!71;UBERON:0002020!2.71e-21!34;UBERON:0001049!7.03e-21!52;UBERON:0005068!7.03e-21!52;UBERON:0006241!7.03e-21!52;UBERON:0007135!7.03e-21!52;UBERON:0000955!5.55e-19!50;UBERON:0006238!5.55e-19!50;UBERON:0002616!9.73e-19!49;UBERON:0000033!1.10e-18!63;UBERON:0003056!1.10e-17!49;UBERON:0002791!2.30e-17!29;UBERON:0003528!2.30e-17!29;UBERON:0001893!2.30e-17!29;UBERON:0003080!1.06e-15!40;UBERON:0002780!1.71e-15!39;UBERON:0001890!1.71e-15!39;UBERON:0006240!1.71e-15!39;UBERON:0000956!7.74e-12!21;UBERON:0001869!7.74e-12!21;UBERON:0000203!7.74e-12!21;UBERON:0002619!8.72e-10!17;UBERON:0007811!3.03e-08!86;UBERON:0000153!2.87e-07!94;UBERON:0000025!4.00e-07!114;UBERON:0002420!7.92e-07!8;UBERON:0007245!7.92e-07!8;UBERON:0010009!7.92e-07!8;UBERON:0010011!7.92e-07!8;UBERON:0000454!7.92e-07!8;UBERON:0002021!8.36e-07!10;UBERON:0000411!8.36e-07!10;UBERON:0001950!8.36e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,7.89e-36,73;UBERON:0001016,1.68e-34,75;UBERON:0002020,3.84e-32,34;UBERON:0004121,3.81e-28,95;UBERON:0000924,3.81e-28,95;UBERON:0006601,3.81e-28,95;UBERON:0000073,1.52e-27,54;UBERON:0003528,7.80e-25,29;UBERON:0002791,7.80e-25,29;UBERON:0001893,7.80e-25,29;UBERON:0002346,1.20e-23,64;UBERON:0003075,1.20e-23,64;UBERON:0007284,1.20e-23,64;UBERON:0001049,2.57e-23,52;UBERON:0005068,2.57e-23,52;UBERON:0006241,2.57e-23,52;UBERON:0007135,2.57e-23,52;UBERON:0010371,2.46e-19,73;UBERON:0002780,2.57e-19,39;UBERON:0001890,2.57e-19,39;UBERON:0006240,2.57e-19,39;UBERON:0003080,1.24e-18,40;UBERON:0002616,7.39e-18,46;UBERON:0003056,1.69e-17,49;UBERON:0000955,2.69e-17,47;UBERON:0006238,2.69e-17,47;UBERON:0010314,5.74e-17,92;UBERON:0000956,1.02e-14,21;UBERON:0001869,1.02e-14,21;UBERON:0000203,1.02e-14,21;UBERON:0002619,4.07e-12,17;UBERON:0002420,7.90e-12,8;UBERON:0007245,7.90e-12,8;UBERON:0010009,7.90e-12,8;UBERON:0010011,7.90e-12,8;UBERON:0000454,7.90e-12,8;UBERON:0001948,1.07e-08,5;UBERON:0002315,1.07e-08,5;UBERON:0002021,1.55e-08,10;UBERON:0000411,1.55e-08,10;UBERON:0001950,1.55e-08,10;UBERON:0000025,5.25e-08,114;UBERON:0000369,8.04e-08,5;UBERON:0002435,8.04e-08,5;UBERON:0000204,8.04e-08,5;UBERON:0010082,8.04e-08,5;UBERON:0002240,4.12e-07,6;UBERON:0005174,4.12e-07,6;UBERON:0001137,4.12e-07,6;UBERON:0004111,7.39e-07,122;UBERON:0011216,8.19e-07,194
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,1.36609096991689,0,0,0,0.550640256485045,0,1.52617609466313,0.439372365468944,1.36100929351998,1.1198913730029,0,0,0,0,0.771778308107841,0,0.515672092277442,2.63011399117477,8.99284664762456,2.53532561402472,1.69422266034566,0,0,0,0,0,1.53687322128622,3.31806759387129,7.1553147315796,1.47227472945967,3.42781181284564,5.07997644188711,1.95985278743926,3.25874601462004,3.67687514644008,3.30347642998166,2.17068474744819,3.37934373163736,5.01167893374737,9.97215315266265,6.77187381723788,5.02529398202486,2.8138130501584,3.51435969886663,6.77645746589436,7.11858403995515,4.10078780815661,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.445326417194474,0.173485326766136,1.21786191324856,0.230615497256059,0.452167921657868,0.352766121407114,0,0,0.289198713839823,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.599162557619291,1.37250180845588,1.38219787324151,0.521472960576829,0.767146371990992,1.0389402227978,0.648965052271031,0.407357455401265,0.124406970610093,0.252722758433675,0,0.390361328888111,0.689706313300419,0.900310649026746,1.50704817835715,1.15662048557257,0.896796041993948,0.749613796477831,1.03481348295606,0,0.378212160335639,0,0,1.11218899690239,0,0.411564272815887,0,0,0,0,0.207125772535502,0,1.62055855314913,0.473489471170421,0.393528463494808,1.23413690309903,0.697601834251224,1.07309360559848,0.700592054203017,0.493679549740441,0.32833492815819,0,0.146199987425332,0.658650345873152,0.134206418760372,0.420579897128254,2.46971069710283,0,0,0.639864751605702,1.16118335930219,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.799739588268102,1.1270773567308,0.814605311381257,0.193952487167626,0.701358198903186,0.252946148497029,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0.94652465824877,1.17131623288992,2.15423397732799,1.19484398976276,1.33679204449436,1.41538265394416,1.61924280669958,0.876767573733936,1.58115111178609,0.642642632843614,0,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,1.07021290561242,0.493647061806363,0,0,0.21183207086382,0,0,0.484393280087717,0.0603129249281559,0.119372344003136,0.492422699235184,0,0.927126510052548,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.540026704109006,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0.496375471371293,0,0.258319646955462,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,2.25900737046827,2.30162618253588,3.43737308063638,2.06223818812425,1.37016503954128,0.755393897389701,0.675022500231806,1.80128481289688,4.07828168085784,4.14208249401456,0,0,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0,0,0.760437899670719,0,1.03005658216871,0.89635213366817,0.17230640686684,0,0.695305955669133,0.578727661391115,0.412085900803307,1.32479028120958,1.02860775715625,0.887379030796687,0.715308569841963,0.872078499793971,0.0941093804153306,0.592302255241736,0.914639864363863,1.31534855718921,1.49384525230448,0,0.237270036248348,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,1.24905288968973,0.233931608445408,0.644613162144895,0.382576664137687,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0.190023419456374,0,0,0,0,0,0,0,0,0,0,0.523523743973798,1.17646297606203,1.36609096991689,0,0,0,0.550640256485045,0,1.52617609466313,0.439372365468944,1.36100929351998,1.1198913730029,0,0,0,0,0.771778308107841,0,0.515672092277442,2.63011399117477,8.99284664762456,2.53532561402472,1.69422266034566,0,0,0,0,0,1.53687322128622,3.31806759387129,7.1553147315796,1.47227472945967,3.42781181284564,5.07997644188711,1.95985278743926,3.25874601462004,3.67687514644008,3.30347642998166,2.17068474744819,3.37934373163736,5.01167893374737,9.97215315266265,6.77187381723788,5.02529398202486,2.8138130501584,3.51435969886663,6.77645746589436,7.11858403995515,4.10078780815661,0.151452386666368,0.302286240427142,0,0,0,0,0,0,0,0.340860645156116,0,0.35333957451034,0.14084341977668,0,0,0,0.216491041011214,0,0,0,0,0.445326417194474,0.173485326766136,1.21786191324856,0.230615497256059,0.452167921657868,0.352766121407114,0,0,0.289198713839823,0.884610551949874,0.161766849947409,0.220841518460394,0,0,0.878342391034642,1.04723353406728,0,0,0,0,0.599162557619291,1.37250180845588,1.38219787324151,0.521472960576829,0.767146371990992,1.0389402227978,0.648965052271031,0.407357455401265,0.124406970610093,0.252722758433675,0,0.390361328888111,0.689706313300419,0.900310649026746,1.50704817835715,1.15662048557257,0.896796041993948,0.749613796477831,1.03481348295606,0,0.378212160335639,0,0,1.11218899690239,0,0.411564272815887,0,0,0,0,0.207125772535502,0,1.62055855314913,0.473489471170421,0.393528463494808,1.23413690309903,0.697601834251224,1.07309360559848,0.700592054203017,0.493679549740441,0.32833492815819,0,0.146199987425332,0.658650345873152,0.134206418760372,0.420579897128254,2.46971069710283,0,0,0.639864751605702,1.16118335930219,0.515469845288373,0.403367049246685,0,0.190225626112559,0,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0.799739588268102,1.1270773567308,0.814605311381257,0.193952487167626,0.701358198903186,0.252946148497029,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,2.87536413054709,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0.195133647857799,0,0.221464689648775,0,0,0,0,0,0,0,0,0.642202359951168,0.703270119553219,0,0,0.94652465824877,1.17131623288992,2.15423397732799,1.19484398976276,1.33679204449436,1.41538265394416,1.61924280669958,0.876767573733936,1.58115111178609,0.642642632843614,0,0.534196811001766,0.162886959353576,0,0,0.242780636154981,0,0,0.295301892880773,0,0,0,0.356497378384721,0,0,0,0,0.18006109403131,0.129358683782755,0.214337035031592,0.177340233642274,1.07021290561242,0.493647061806363,0,0,0.21183207086382,0,0,0.484393280087717,0.0603129249281559,0.119372344003136,0.492422699235184,0,0.927126510052548,0,0.206386867963223,0.185194527369712,0,0,0,0,0,0,0,0.316335993581135,1.01659733563424,0.540026704109006,0,0.218362563746178,0.134864346384821,0.247960367176008,0,0,0,0,0,0.496375471371293,0,0.258319646955462,0.337912250981556,0.117357238645754,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0,2.25900737046827,2.30162618253588,3.43737308063638,2.06223818812425,1.37016503954128,0.755393897389701,0.675022500231806,1.80128481289688,4.07828168085784,4.14208249401456,0,0,0.170733605754134,0.486213434136588,0,0,0.44449345560323,0.206035057238894,0,0,0.760437899670719,0,1.03005658216871,0.89635213366817,0.17230640686684,0,0.695305955669133,0.578727661391115,0.412085900803307,1.32479028120958,1.02860775715625,0.887379030796687,0.715308569841963,0.872078499793971,0.0941093804153306,0.592302255241736,0.914639864363863,1.31534855718921,1.49384525230448,0,0.237270036248348,0.394017929502254,0.409231043169689,0.464810523557898,0.578719832943424,1.24905288968973,0.233931608445408,0.644613162144895,0.382576664137687,0,0
|short_description=p@chr9:49376574..49376610,-
|short_description=p@chr9:49376574..49376610,-
}}
}}

Latest revision as of 06:38, 5 August 2015

Short description:p@chr9:49376574..49376610, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr9:49376574..49376610, -
Coexpression cluster:MCL_coexpression_mm9:87
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p@chr9:49376574..49376610-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.18
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H21.37
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.44
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.36
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.12
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C32.63
Mouse Granule cells, donor2.CNhs12357.11731-123E38.99
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.69
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D53.32
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.16
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D91.47
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.08
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.96
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F23.26
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.17
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.01
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.97
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.77
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.03
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.81
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I63.51
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.78
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F67.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E14.10
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.14
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.45
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.88
cerebellum, neonate N30.CNhs11135.1395-42I21.05
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A40.60
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D50.52
cortex, neonate N30.CNhs11107.1392-42F20.77
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.69
eyeball, embryo E15.CNhs10593.426-16C90.90
eyeball, embryo E17.CNhs11023.1261-18D41.51
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E70.90
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A21.03
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E71.11
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I91.62
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C61.23
heart, embryo E17.CNhs11025.479-18E50.70
heart, embryo E18.CNhs11030.1283-20G31.07
heart, neonate N00.CNhs11213.639-21E30.70
heart, neonate N03.CNhs11221.1349-25I20.49
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.66
heart, neonate N30.CNhs11202.1390-42D20.13
hippocampus, adult.CNhs10478.13-16E80.42
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.52
intestine, embryo E16.CNhs10585.463-22H40.40
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.80
kidney, embryo E16.CNhs10584.464-22A51.13
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.70
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C20.64
medulla oblongata, neonate N30.CNhs11200.1396-42A30.70
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.95
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.42
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D41.62
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I90.64
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.16
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E60.18
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.18
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.48
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.50
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.19
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.30
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A33.44
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A84.08
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.49
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.00
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.90
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.17
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.70
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.87
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.09
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.46
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.25
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.38
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.00





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
central nervous system7.89e-3673
nervous system1.68e-3475
gray matter3.84e-3234
ectoderm-derived structure3.81e-2895
ectoderm3.81e-2895
presumptive ectoderm3.81e-2895
regional part of nervous system1.52e-2754
brain grey matter7.80e-2529
regional part of telencephalon7.80e-2529
telencephalon7.80e-2529
neurectoderm1.20e-2364
neural plate1.20e-2364
presumptive neural plate1.20e-2364
neural tube2.57e-2352
neural rod2.57e-2352
future spinal cord2.57e-2352
neural keel2.57e-2352
ecto-epithelium2.46e-1973
regional part of forebrain2.57e-1939
forebrain2.57e-1939
future forebrain2.57e-1939
anterior neural tube1.24e-1840
regional part of brain7.39e-1846
pre-chordal neural plate1.69e-1749
brain2.69e-1747
future brain2.69e-1747
structure with developmental contribution from neural crest5.74e-1792
cerebral cortex1.02e-1421
cerebral hemisphere1.02e-1421
pallium1.02e-1421
regional part of cerebral cortex4.07e-1217
basal ganglion7.90e-128
nuclear complex of neuraxis7.90e-128
aggregate regional part of brain7.90e-128
collection of basal ganglia7.90e-128
cerebral subcortex7.90e-128
regional part of spinal cord1.07e-085
gray matter of spinal cord1.07e-085
occipital lobe1.55e-0810
visual cortex1.55e-0810
neocortex1.55e-0810
tube5.25e-08114
corpus striatum8.04e-085
striatum8.04e-085
ventral part of telencephalon8.04e-085
future corpus striatum8.04e-085
spinal cord4.12e-076
dorsal region element4.12e-076
dorsum4.12e-076
anatomical conduit7.39e-07122
organ system subdivision8.19e-07194
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr9:49376574..49376610,-&oldid=3869805"