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FFCP PHASE1:Mm9::chr2:6805967..6805984,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=NA
|EntrezGene=NA
|HGNC=
|HGNC=
|MCL_coexpression_id=295
|TSSclassifier=NA
|UniProt=NA
|UniProt=NA
|association_with_transcript=NA
|association_with_transcript=NA
|cluster_id=chr2:6805967..6805984,-
|description=CAGE_peak_at_chr2:6805967..6805984,-
|description=CAGE_peak_at_chr2:6805967..6805984,-
|id=chr2:6805967..6805984,-
|id=chr2:6805967..6805984,-
|ontology_enrichment_celltype=CL:0000117!4.86e-16!23;CL:0000337!4.86e-16!23;CL:0000221!4.52e-15!44;CL:0000133!4.52e-15!44;CL:0002319!1.96e-14!43;CL:0000540!5.46e-13!33;CL:0000047!5.46e-13!33;CL:0000031!5.46e-13!33;CL:0000404!5.46e-13!33;CL:0000055!1.88e-10!50;CL:0000393!2.97e-09!39;CL:0000211!2.97e-09!39
|ontology_enrichment_celltype=CL:0000117!4.86e-16!23;CL:0000337!4.86e-16!23;CL:0000221!4.52e-15!44;CL:0000133!4.52e-15!44;CL:0002319!1.96e-14!43;CL:0000540!5.46e-13!33;CL:0000047!5.46e-13!33;CL:0000031!5.46e-13!33;CL:0000404!5.46e-13!33;CL:0000055!1.88e-10!50;CL:0000393!2.97e-09!39;CL:0000211!2.97e-09!39
|ontology_enrichment_celltype_v019_2=CL:0000117,1.02e-19,23;CL:0000337,1.02e-19,23;CL:0000540,3.70e-12,33;CL:0000047,3.70e-12,33;CL:0000031,3.70e-12,33;CL:0000404,3.70e-12,33;CL:0000221,5.74e-12,44;CL:0000133,5.74e-12,44;CL:0002319,2.77e-11,43;CL:0000393,4.68e-09,39;CL:0000211,4.68e-09,39;CL:0002609,1.04e-07,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!9.59e-29!75;UBERON:0001016!9.59e-29!75;UBERON:0000033!1.69e-28!63;UBERON:0001017!2.23e-28!73;UBERON:0005743!2.23e-28!73;UBERON:0004121!3.02e-28!102;UBERON:0000924!3.02e-28!102;UBERON:0006601!3.02e-28!102;UBERON:0002346!1.08e-25!71;UBERON:0003075!1.08e-25!71;UBERON:0007284!1.08e-25!71;UBERON:0003056!3.31e-25!49;UBERON:0001049!3.48e-24!52;UBERON:0005068!3.48e-24!52;UBERON:0006241!3.48e-24!52;UBERON:0007135!3.48e-24!52;UBERON:0000955!5.59e-23!50;UBERON:0006238!5.59e-23!50;UBERON:0002616!4.40e-22!49;UBERON:0002020!1.82e-21!34;UBERON:0003080!2.98e-19!40;UBERON:0002780!7.89e-19!39;UBERON:0001890!7.89e-19!39;UBERON:0006240!7.89e-19!39;UBERON:0002791!2.62e-18!29;UBERON:0003528!2.62e-18!29;UBERON:0001893!2.62e-18!29;UBERON:0007811!1.27e-15!86;UBERON:0000153!1.60e-13!94;UBERON:0000956!2.88e-13!21;UBERON:0001869!2.88e-13!21;UBERON:0000203!2.88e-13!21;UBERON:0002619!2.57e-10!17;UBERON:0000970!8.84e-07!9;UBERON:0000019!8.84e-07!9;UBERON:0000047!8.84e-07!9;UBERON:0004088!8.84e-07!9;UBERON:0002104!8.84e-07!9;UBERON:0001456!8.84e-07!9;UBERON:0003072!8.84e-07!9;UBERON:0003071!8.84e-07!9;UBERON:0004128!8.84e-07!9
|ontology_enrichment_uberon=UBERON:0000073!9.59e-29!75;UBERON:0001016!9.59e-29!75;UBERON:0000033!1.69e-28!63;UBERON:0001017!2.23e-28!73;UBERON:0005743!2.23e-28!73;UBERON:0004121!3.02e-28!102;UBERON:0000924!3.02e-28!102;UBERON:0006601!3.02e-28!102;UBERON:0002346!1.08e-25!71;UBERON:0003075!1.08e-25!71;UBERON:0007284!1.08e-25!71;UBERON:0003056!3.31e-25!49;UBERON:0001049!3.48e-24!52;UBERON:0005068!3.48e-24!52;UBERON:0006241!3.48e-24!52;UBERON:0007135!3.48e-24!52;UBERON:0000955!5.59e-23!50;UBERON:0006238!5.59e-23!50;UBERON:0002616!4.40e-22!49;UBERON:0002020!1.82e-21!34;UBERON:0003080!2.98e-19!40;UBERON:0002780!7.89e-19!39;UBERON:0001890!7.89e-19!39;UBERON:0006240!7.89e-19!39;UBERON:0002791!2.62e-18!29;UBERON:0003528!2.62e-18!29;UBERON:0001893!2.62e-18!29;UBERON:0007811!1.27e-15!86;UBERON:0000153!1.60e-13!94;UBERON:0000956!2.88e-13!21;UBERON:0001869!2.88e-13!21;UBERON:0000203!2.88e-13!21;UBERON:0002619!2.57e-10!17;UBERON:0000970!8.84e-07!9;UBERON:0000019!8.84e-07!9;UBERON:0000047!8.84e-07!9;UBERON:0004088!8.84e-07!9;UBERON:0002104!8.84e-07!9;UBERON:0001456!8.84e-07!9;UBERON:0003072!8.84e-07!9;UBERON:0003071!8.84e-07!9;UBERON:0004128!8.84e-07!9
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.63e-32,64;UBERON:0003075,2.63e-32,64;UBERON:0007284,2.63e-32,64;UBERON:0000073,9.57e-30,54;UBERON:0004121,9.25e-29,95;UBERON:0000924,9.25e-29,95;UBERON:0006601,9.25e-29,95;UBERON:0010371,1.48e-28,73;UBERON:0001017,1.67e-28,73;UBERON:0001049,3.01e-28,52;UBERON:0005068,3.01e-28,52;UBERON:0006241,3.01e-28,52;UBERON:0007135,3.01e-28,52;UBERON:0003056,4.13e-28,49;UBERON:0001016,3.18e-27,75;UBERON:0002020,3.01e-25,34;UBERON:0000955,6.46e-25,47;UBERON:0006238,6.46e-25,47;UBERON:0002616,7.91e-24,46;UBERON:0003080,6.92e-22,40;UBERON:0002780,2.34e-21,39;UBERON:0001890,2.34e-21,39;UBERON:0006240,2.34e-21,39;UBERON:0003528,2.67e-21,29;UBERON:0002791,2.67e-21,29;UBERON:0001893,2.67e-21,29;UBERON:0010314,9.99e-19,92;UBERON:0000956,5.16e-15,21;UBERON:0001869,5.16e-15,21;UBERON:0000203,5.16e-15,21;UBERON:0002619,2.27e-11,17;UBERON:0002420,1.87e-07,8;UBERON:0007245,1.87e-07,8;UBERON:0010009,1.87e-07,8;UBERON:0010011,1.87e-07,8;UBERON:0000454,1.87e-07,8;UBERON:0000020,4.39e-07,12;UBERON:0001032,4.39e-07,12;UBERON:0004456,4.39e-07,12;UBERON:0002021,4.66e-07,10;UBERON:0000411,4.66e-07,10;UBERON:0001950,4.66e-07,10;UBERON:0000970,6.44e-07,9;UBERON:0000019,6.44e-07,9;UBERON:0000047,6.44e-07,9;UBERON:0010312,6.44e-07,9;UBERON:0004088,6.44e-07,9;UBERON:0002104,6.44e-07,9;UBERON:0001456,6.44e-07,9;UBERON:0003072,6.44e-07,9;UBERON:0004128,6.44e-07,9;UBERON:0003071,6.44e-07,9;UBERON:0003076,7.82e-07,12;UBERON:0003057,7.82e-07,12
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,2.85592037554813,0.777719596297134,1.39986421625363,4.31257693094915,0,0,0,0,0,0,19.4223802425214,14.2827564403449,10.775133859605,0.338844532069132,0,0,0,0,0.599200221036809,1.53687322128622,22.2932666463227,17.5507719831198,17.6672967535161,2.57085885963423,5.96345060569357,35.8898041699815,27.1242682981609,20.2228133054205,5.50579404996943,3.83062014255563,4.45458946443106,23.7395317914349,20.2187692361325,28.6502353806218,1.3959149950069,5.06486349028512,1.83357897332172,10.0173719061047,9.39653093274079,13.4207600994216,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,7.04217098883402,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.323533699894818,0,0,0,6.44117753425404,6.28340120440365,0,0,0,0,4.19413790333504,10.0650132620098,34.6806011831506,5.9100268865374,8.69432554923124,5.40248915854856,8.27430441645564,0,0,0,0.631325567659422,10.9301172088671,5.51765050640335,9.90341713929421,11.9056806090215,15.988577300562,19.601399203582,14.6174690313177,3.62184719034622,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,18.2952255250791,28.1958637919239,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,2.88991061978026,1.75817529888305,0,0,0.315508219416257,0,0,0.716906393857656,0.222798674082394,0.566153061577665,0,0,0.395287777946524,29.2402397943844,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,3.24109969256358,1.81102157295856,1.07168517515796,0.886701168211368,1.24858172321449,1.31639216481697,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,4.51801474093653,5.9842280745933,8.59343270159095,6.18671456437275,1.37016503954128,3.0215755895588,2.70009000092722,5.40385443869065,6.79713613476307,4.65984280576638,3.00983307994112,3.59122386060928,5.12200817262403,4.61902762429759,6.70762120409543,2.38996560985018,4.00044110042907,6.18105171716683,4.49286893428541,5.05394423527595,5.0695859978048,3.9611531691076,5.15028291084353,4.73786127796033,5.85841783347255,4.76293691283074,3.59241410429052,5.59436739344745,4.94503080963968,4.85756436443511,5.82877729055206,4.96932257246145,5.48403236878838,4.50573891560218,6.7758753899038,5.24610568928394,4.39027134894654,6.31367307450823,5.70377278152619,1.68342681497322,4.38949567059444,3.54616136552028,4.09231043169689,4.18329471202108,2.89359916471712,8.99318080576605,3.97683734357194,1.93383948643468,0.956441660344217,0,0.231867835620421
|phase1_expression=2.40223270657191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.8343270329458,2.85592037554813,0.777719596297134,1.39986421625363,4.31257693094915,0,0,0,0,0,0,19.4223802425214,14.2827564403449,10.775133859605,0.338844532069132,0,0,0,0,0.599200221036809,1.53687322128622,22.2932666463227,17.5507719831198,17.6672967535161,2.57085885963423,5.96345060569357,35.8898041699815,27.1242682981609,20.2228133054205,5.50579404996943,3.83062014255563,4.45458946443106,23.7395317914349,20.2187692361325,28.6502353806218,1.3959149950069,5.06486349028512,1.83357897332172,10.0173719061047,9.39653093274079,13.4207600994216,0.227178579999552,0.529000920747499,0,0,0,0,0,0,0.140444420131752,0,0,0,7.04217098883402,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0.150722640552623,0.117588707135705,0.125666591329675,0,0,0,0.323533699894818,0,0,0,6.44117753425404,6.28340120440365,0,0,0,0,4.19413790333504,10.0650132620098,34.6806011831506,5.9100268865374,8.69432554923124,5.40248915854856,8.27430441645564,0,0,0,0.631325567659422,10.9301172088671,5.51765050640335,9.90341713929421,11.9056806090215,15.988577300562,19.601399203582,14.6174690313177,3.62184719034622,0,0,0,0.219195732427575,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0.0810688095458557,0.146199987425332,0,0,18.2952255250791,28.1958637919239,0,0,0.213288250535234,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339490171550376,0,0,0,0,0,0,0.159454768657487,0.163863314715738,0.172684981865896,0,0,0,0,0,2.88991061978026,1.75817529888305,0,0,0.315508219416257,0,0,0.716906393857656,0.222798674082394,0.566153061577665,0,0,0.395287777946524,29.2402397943844,0,0,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0.356497378384721,0,0,0,0,3.24109969256358,1.81102157295856,1.07168517515796,0.886701168211368,1.24858172321449,1.31639216481697,0,0,0,0,0,0.161464426695906,0.120625849856312,0,0,0,2.22510362412612,0,0,0,0,0,0,0,0,0,0,0.158167996790568,0.203319467126849,0.216010681643603,0.209088296014469,0,0.134864346384821,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.314578033277133,0,0,0,0,0,0,0,0.198681354781265,0,0,0,0,0,0,0,0.116876902181569,0,0,0,0,0,0,0,0,0,4.51801474093653,5.9842280745933,8.59343270159095,6.18671456437275,1.37016503954128,3.0215755895588,2.70009000092722,5.40385443869065,6.79713613476307,4.65984280576638,3.00983307994112,3.59122386060928,5.12200817262403,4.61902762429759,6.70762120409543,2.38996560985018,4.00044110042907,6.18105171716683,4.49286893428541,5.05394423527595,5.0695859978048,3.9611531691076,5.15028291084353,4.73786127796033,5.85841783347255,4.76293691283074,3.59241410429052,5.59436739344745,4.94503080963968,4.85756436443511,5.82877729055206,4.96932257246145,5.48403236878838,4.50573891560218,6.7758753899038,5.24610568928394,4.39027134894654,6.31367307450823,5.70377278152619,1.68342681497322,4.38949567059444,3.54616136552028,4.09231043169689,4.18329471202108,2.89359916471712,8.99318080576605,3.97683734357194,1.93383948643468,0.956441660344217,0,0.231867835620421
|short_description=p@chr2:6805967..6805984,-
|short_description=p@chr2:6805967..6805984,-
}}
}}

Latest revision as of 08:50, 5 August 2015

Short description:p@chr2:6805967..6805984, -
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_at_chr2:6805967..6805984, -
Coexpression cluster:MCL_coexpression_mm9:295
Association with transcript: NA
EntrezGene:NA
Link to Zenbu:ZENBU


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CAGE Expression

Sample

p@chr2:6805967..6805984-

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G72.40
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.79
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.83
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B82.86
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.78
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C319.42
Mouse Granule cells, donor2.CNhs12357.11731-123E314.28
Mouse Granule cells, donor3.CNhs12108.11636-122C710.78
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D522.29
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F517.55
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.67
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D55.96
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D235.89
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F227.12
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F33.83
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.45
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D423.74
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.22
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D828.65
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.83
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.02
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F69.40
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E113.42
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.53
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G67.04
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.13
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B26.44
cerebellum, neonate N30.CNhs11135.1395-42I26.28
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.19
corpus striatum, adult.CNhs10487.19-21D810.07
corpus striatum, neonate N00.CNhs11226.630-43F134.68
cortex, adult.CNhs10473.12-14D55.91
cortex, neonate N30.CNhs11107.1392-42F28.69
diencephalon, adult.CNhs10482.20-12F25.40
diencephalon, neonate N30.CNhs11201.1388-42B28.27
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.63
eyeball, embryo E12.CNhs11016.345-16C610.93
eyeball, embryo E14.CNhs10521.399-16E25.52
eyeball, embryo E15.CNhs10593.426-16C99.90
eyeball, embryo E17.CNhs11023.1261-18D411.91
eyeball, neonate N00.CNhs11207.633-15C615.99
eyeball, neonate N01.CNhs11140.1532-43E719.60
eyeball, neonate N02.CNhs11205.1551-44G814.62
eyeball, neonate N16.CNhs11188.777-19A23.62
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E818.30
hippocampus, neonate N00.CNhs11228.627-43G128.20
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.43
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.00
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.89
medulla oblongata, neonate N30.CNhs11200.1396-42A31.76
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.72
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.00
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I929.24
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.00
pituitary gland, embryo E12.CNhs11018.346-16E63.24
pituitary gland, embryo E13.CNhs11009.370-44C71.81
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.32
pituitary gland, neonate N00.CNhs11190.1308-22E90.00
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.12
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.23
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.08
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A14.52
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.98
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.59
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.19
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.02
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.70
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A75.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A86.80
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.66
whole body, embryo E11.CNhs11014.324-5I83.01
whole body, embryo E12.CNhs10587.857-27C93.59
whole body, embryo E13.CNhs10512.372-23H25.12
whole body, embryo E14.5.CNhs10578.420-27D24.62
whole body, embryo E14.CNhs10519.395-14B16.71
whole body, embryo E16.CNhs10514.453-14F22.39
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G54.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G55.07
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G55.15
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.74
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G55.86
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.59
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.59
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G54.95
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.86
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G55.83
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G54.97
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G55.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.51
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.78
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G55.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G56.31
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G55.70
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G54.39
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.09
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G54.18
whole body, embryo E17.5.CNhs10513.490-9F92.89
whole body, embryo E17.CNhs10517.475-3I58.99
whole body, embryo E18.CNhs10516.493-3B33.98
whole body, neonate N00.CNhs10525.657-19C21.93
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.63e-3264
neural plate2.63e-3264
presumptive neural plate2.63e-3264
regional part of nervous system9.57e-3054
ectoderm-derived structure9.25e-2995
ectoderm9.25e-2995
presumptive ectoderm9.25e-2995
ecto-epithelium1.48e-2873
central nervous system1.67e-2873
neural tube3.01e-2852
neural rod3.01e-2852
future spinal cord3.01e-2852
neural keel3.01e-2852
pre-chordal neural plate4.13e-2849
nervous system3.18e-2775
gray matter3.01e-2534
brain6.46e-2547
future brain6.46e-2547
regional part of brain7.91e-2446
anterior neural tube6.92e-2240
regional part of forebrain2.34e-2139
forebrain2.34e-2139
future forebrain2.34e-2139
brain grey matter2.67e-2129
regional part of telencephalon2.67e-2129
telencephalon2.67e-2129
structure with developmental contribution from neural crest9.99e-1992
cerebral cortex5.16e-1521
cerebral hemisphere5.16e-1521
pallium5.16e-1521
regional part of cerebral cortex2.27e-1117
basal ganglion1.87e-078
nuclear complex of neuraxis1.87e-078
aggregate regional part of brain1.87e-078
collection of basal ganglia1.87e-078
cerebral subcortex1.87e-078
sense organ4.39e-0712
sensory system4.39e-0712
entire sense organ system4.39e-0712
occipital lobe4.66e-0710
visual cortex4.66e-0710
neocortex4.66e-0710
eye6.44e-079
camera-type eye6.44e-079
simple eye6.44e-079
immature eye6.44e-079
ocular region6.44e-079
visual system6.44e-079
face6.44e-079
optic cup6.44e-079
optic vesicle6.44e-079
eye primordium6.44e-079
posterior neural tube7.82e-0712
chordal neural plate7.82e-0712
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