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FFCP PHASE1:Mm9::chr6:30754983..30755006,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|EntrezGene=
|HGNC=
|HGNC=
|MCL_coexpression_id=145
|MCL_coexpression_id=145
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=199bp_to_uc009bfw.1_5end
|association_with_transcript=199bp_to_uc009bfw.1_5end
|cluster_id=chr6:30754983..30755006,+
|description=CAGE_peak_1_at_uc009bfw.1_5end
|description=CAGE_peak_1_at_uc009bfw.1_5end
|id=chr6:30754983..30755006,+
|id=chr6:30754983..30755006,+
|ontology_enrichment_celltype=CL:0000117!1.94e-10!23;CL:0000337!1.94e-10!23
|ontology_enrichment_celltype=CL:0000117!1.94e-10!23;CL:0000337!1.94e-10!23
|ontology_enrichment_celltype_v019_2=CL:0000117,1.91e-12,23;CL:0000337,1.91e-12,23
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001049!2.26e-17!52;UBERON:0005068!2.26e-17!52;UBERON:0006241!2.26e-17!52;UBERON:0007135!2.26e-17!52;UBERON:0000955!2.14e-16!50;UBERON:0006238!2.14e-16!50;UBERON:0002346!5.68e-16!71;UBERON:0003075!5.68e-16!71;UBERON:0007284!5.68e-16!71;UBERON:0002616!6.41e-16!49;UBERON:0002020!7.54e-15!34;UBERON:0000033!1.34e-14!63;UBERON:0003056!3.61e-14!49;UBERON:0001017!9.82e-14!73;UBERON:0005743!9.82e-14!73;UBERON:0003080!2.22e-13!40;UBERON:0002780!9.47e-13!39;UBERON:0001890!9.47e-13!39;UBERON:0006240!9.47e-13!39;UBERON:0000025!1.03e-12!114;UBERON:0000073!1.09e-12!75;UBERON:0001016!1.09e-12!75;UBERON:0002791!5.13e-12!29;UBERON:0003528!5.13e-12!29;UBERON:0001893!5.13e-12!29;UBERON:0004121!2.47e-11!102;UBERON:0000924!2.47e-11!102;UBERON:0006601!2.47e-11!102;UBERON:0004111!7.97e-10!122;UBERON:0002021!2.53e-08!10;UBERON:0000411!2.53e-08!10;UBERON:0001950!2.53e-08!10;UBERON:0002619!9.74e-08!17;UBERON:0000956!1.63e-07!21;UBERON:0001869!1.63e-07!21;UBERON:0000203!1.63e-07!21
|ontology_enrichment_uberon=UBERON:0001049!2.26e-17!52;UBERON:0005068!2.26e-17!52;UBERON:0006241!2.26e-17!52;UBERON:0007135!2.26e-17!52;UBERON:0000955!2.14e-16!50;UBERON:0006238!2.14e-16!50;UBERON:0002346!5.68e-16!71;UBERON:0003075!5.68e-16!71;UBERON:0007284!5.68e-16!71;UBERON:0002616!6.41e-16!49;UBERON:0002020!7.54e-15!34;UBERON:0000033!1.34e-14!63;UBERON:0003056!3.61e-14!49;UBERON:0001017!9.82e-14!73;UBERON:0005743!9.82e-14!73;UBERON:0003080!2.22e-13!40;UBERON:0002780!9.47e-13!39;UBERON:0001890!9.47e-13!39;UBERON:0006240!9.47e-13!39;UBERON:0000025!1.03e-12!114;UBERON:0000073!1.09e-12!75;UBERON:0001016!1.09e-12!75;UBERON:0002791!5.13e-12!29;UBERON:0003528!5.13e-12!29;UBERON:0001893!5.13e-12!29;UBERON:0004121!2.47e-11!102;UBERON:0000924!2.47e-11!102;UBERON:0006601!2.47e-11!102;UBERON:0004111!7.97e-10!122;UBERON:0002021!2.53e-08!10;UBERON:0000411!2.53e-08!10;UBERON:0001950!2.53e-08!10;UBERON:0002619!9.74e-08!17;UBERON:0000956!1.63e-07!21;UBERON:0001869!1.63e-07!21;UBERON:0000203!1.63e-07!21
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.24e-22,54;UBERON:0001049,2.82e-20,52;UBERON:0005068,2.82e-20,52;UBERON:0006241,2.82e-20,52;UBERON:0007135,2.82e-20,52;UBERON:0002020,2.52e-19,34;UBERON:0002346,1.25e-18,64;UBERON:0003075,1.25e-18,64;UBERON:0007284,1.25e-18,64;UBERON:0001017,1.65e-17,73;UBERON:0001016,1.33e-16,75;UBERON:0000955,3.30e-16,47;UBERON:0006238,3.30e-16,47;UBERON:0002616,1.35e-15,46;UBERON:0003528,2.12e-15,29;UBERON:0002791,2.12e-15,29;UBERON:0001893,2.12e-15,29;UBERON:0010371,2.02e-14,73;UBERON:0003056,2.65e-14,49;UBERON:0010314,2.76e-14,92;UBERON:0003080,3.21e-14,40;UBERON:0002780,2.07e-13,39;UBERON:0001890,2.07e-13,39;UBERON:0006240,2.07e-13,39;UBERON:0004121,2.72e-13,95;UBERON:0000924,2.72e-13,95;UBERON:0006601,2.72e-13,95;UBERON:0000025,3.56e-12,114;UBERON:0002021,5.15e-11,10;UBERON:0000411,5.15e-11,10;UBERON:0001950,5.15e-11,10;UBERON:0002619,5.90e-11,17;UBERON:0004111,3.26e-10,122;UBERON:0000956,3.29e-09,21;UBERON:0001869,3.29e-09,21;UBERON:0000203,3.29e-09,21;UBERON:0002420,6.31e-08,8;UBERON:0007245,6.31e-08,8;UBERON:0010009,6.31e-08,8;UBERON:0010011,6.31e-08,8;UBERON:0000454,6.31e-08,8;UBERON:0003076,6.65e-07,12;UBERON:0003057,6.65e-07,12
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,7.93486468908049,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0,6.56997264128748,2.20868540951614,1.10241719293459,1.34183659425531,2.75765635983006,39.6417171597799,31.9218345212969,55.7591715720164,5.14356522147756,14.0890971147711,13.5437476344758,5.58365998002762,9.56696437053856,48.5898427930256,71.0054890991539,32.8878582645928,9.13357284543973,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,1.52232739156071,0.230615497256059,0.904335843315735,1.52865319276416,0,0.494389935468748,0,0,0.808834249737046,0.220841518460394,0,0,4.68449275218475,1.67557365450764,0,0,0,0,19.7723644014366,10.5225138648284,14.3245961408665,8.8650403298061,10.4843337505436,13.2984348518118,11.8436122039463,0.509196819251581,0,0,1.05220927943237,0.260240885925407,0,0.180062129805349,3.31550599238573,2.24520447199382,2.69038812598185,0.843315521037559,5.17406741478031,0,0,0,0,0.556094498451196,0,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.23674473558521,0.983821158737019,0.925602677324269,3.25547522650571,1.87791380979733,2.10177616260905,1.6455984991348,6.23836363500562,1.13496333364198,0.438599962275997,1.09775057645525,0.536825675041487,5.46753866266731,16.0531195311684,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.658795818896044,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0.814605311381257,1.55161989734101,2.87556861550306,0.69560190836683,0.738050739898011,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0.575392274901621,2.59416362840057,0.823684239564244,28.7536413054709,0.744281895337007,1.87222603868736,0.505157755894224,0,1.4473305640901,0,0,0,0.509235257325564,1.40814148973101,0.670025029767263,1.19021820443007,10.3420833364633,2.67979744980525,7.0868700687608,3.98636921643718,2.29408640602033,1.20879487306127,1.01254341007058,0,0,0,0,18.9449696185595,15.7063660033552,0,0,0,0,0.430846795465598,0.238968797952552,0,0,0,0.292255857911312,0,3.85585579706168,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0,0.316036757935816,0,0,2.38307724027652,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,1.07021290561242,0.493647061806363,0.304464949114599,0.704015124191131,0.847328283455281,0,0,0.968786560175433,0.422190474497091,0.238744688006273,0.492422699235184,0.291480836629851,37.826761610144,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,1.1571483801547,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.844780627453891,0.117357238645754,0.5208175393758,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.6046879469408,31.7624413189952,37.8111038870002,20.4505286988988,10.9613203163303,22.661816921691,19.5756525067224,22.9663813644352,25.3759749031155,34.1721805756201,0.103787347584177,1.99512436700516,1.53660245178721,2.91728060481953,1.04806581313991,1.10306105070008,1.77797382241292,3.5025959730612,2.24643446714271,1.51618327058278,2.5347929989024,2.45214243801899,3.55837728385553,2.36893063898016,2.01024141344646,0.952587382566147,3.1288768005111,3.6652751888104,2.88460130562315,2.79677948255355,8.22886205724997,9.76116933876356,3.09967046931517,2.90692833264657,1.88218760830661,3.29996970777538,4.93905526756486,9.2074399003245,3.53090695999241,8.41713407486608,1.77952527186261,7.38783617816726,10.2307760792422,1.23949472948773,1.15743966588685,1.99848462350357,0.935726433781634,1.50409737833809,0.765153328275374,0.882365676478062,0.463735671240843
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202475267389826,0,0,0,0,1.7008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485510353031154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.46254444320914,7.93486468908049,1.26766280701236,0,0,0,0,0,0,0,0.829516898467821,0.810035629990144,0,6.56997264128748,2.20868540951614,1.10241719293459,1.34183659425531,2.75765635983006,39.6417171597799,31.9218345212969,55.7591715720164,5.14356522147756,14.0890971147711,13.5437476344758,5.58365998002762,9.56696437053856,48.5898427930256,71.0054890991539,32.8878582645928,9.13357284543973,0,0,0.869593466105033,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,1.52232739156071,0.230615497256059,0.904335843315735,1.52865319276416,0,0.494389935468748,0,0,0.808834249737046,0.220841518460394,0,0,4.68449275218475,1.67557365450764,0,0,0,0,19.7723644014366,10.5225138648284,14.3245961408665,8.8650403298061,10.4843337505436,13.2984348518118,11.8436122039463,0.509196819251581,0,0,1.05220927943237,0.260240885925407,0,0.180062129805349,3.31550599238573,2.24520447199382,2.69038812598185,0.843315521037559,5.17406741478031,0,0,0,0,0.556094498451196,0,0.411564272815887,0.398068533636986,0,0,0,0.414251545071004,0.703578179943289,0.720248245844059,0.23674473558521,0.983821158737019,0.925602677324269,3.25547522650571,1.87791380979733,2.10177616260905,1.6455984991348,6.23836363500562,1.13496333364198,0.438599962275997,1.09775057645525,0.536825675041487,5.46753866266731,16.0531195311684,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0,0,0,0.658795818896044,0.251335208800269,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.114248512609729,0,0.814605311381257,1.55161989734101,2.87556861550306,0.69560190836683,0.738050739898011,0.156998727841375,0.246794327843601,0,0,0,0.224862112384854,0,0,0,0.575392274901621,2.59416362840057,0.823684239564244,28.7536413054709,0.744281895337007,1.87222603868736,0.505157755894224,0,1.4473305640901,0,0,0,0.509235257325564,1.40814148973101,0.670025029767263,1.19021820443007,10.3420833364633,2.67979744980525,7.0868700687608,3.98636921643718,2.29408640602033,1.20879487306127,1.01254341007058,0,0,0,0,18.9449696185595,15.7063660033552,0,0,0,0,0.430846795465598,0.238968797952552,0,0,0,0.292255857911312,0,3.85585579706168,0.141940085208269,0.178065603667255,0.651547837414304,0.164970122972535,0,0.728341908464944,0,0.188605079755898,0.295301892880773,0,0,0.727067458955011,0,0.316036757935816,0,0,2.38307724027652,0.36012218806262,0.129358683782755,0.214337035031592,0.532020700926821,1.07021290561242,0.493647061806363,0.304464949114599,0.704015124191131,0.847328283455281,0,0,0.968786560175433,0.422190474497091,0.238744688006273,0.492422699235184,0.291480836629851,37.826761610144,0,0.619160603889667,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0.436725127492355,0.269728692769641,1.1571483801547,0,0,0,0,0,0,0.194451188344048,0.258319646955462,0.844780627453891,0.117357238645754,0.5208175393758,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0.198681354781265,0.240390899039938,0.295379054349154,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,57.6046879469408,31.7624413189952,37.8111038870002,20.4505286988988,10.9613203163303,22.661816921691,19.5756525067224,22.9663813644352,25.3759749031155,34.1721805756201,0.103787347584177,1.99512436700516,1.53660245178721,2.91728060481953,1.04806581313991,1.10306105070008,1.77797382241292,3.5025959730612,2.24643446714271,1.51618327058278,2.5347929989024,2.45214243801899,3.55837728385553,2.36893063898016,2.01024141344646,0.952587382566147,3.1288768005111,3.6652751888104,2.88460130562315,2.79677948255355,8.22886205724997,9.76116933876356,3.09967046931517,2.90692833264657,1.88218760830661,3.29996970777538,4.93905526756486,9.2074399003245,3.53090695999241,8.41713407486608,1.77952527186261,7.38783617816726,10.2307760792422,1.23949472948773,1.15743966588685,1.99848462350357,0.935726433781634,1.50409737833809,0.765153328275374,0.882365676478062,0.463735671240843
|short_description=p1@uc009bfw.1
|short_description=p1@uc009bfw.1
}}
}}

Latest revision as of 13:49, 5 August 2015

Short description:p1@uc009bfw.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_uc009bfw.1_5end
Coexpression cluster:MCL_coexpression_mm9:145
Association with transcript: 199bp_to_uc009bfw.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@uc009bfw.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.70
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C35.46
Mouse Granule cells, donor2.CNhs12357.11731-123E37.93
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.83
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F16.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.10
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.34
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D62.76
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D339.64
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F331.92
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D755.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.14
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D813.54
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E45.58
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.57
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I648.59
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D671.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F632.89
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D90.00
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.87
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.34
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.00
adrenal gland, embryo E14.CNhs11038.406-44C50.17
adrenal gland, embryo E16.CNhs11004.1254-43D61.52
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.90
adrenal gland, neonate N00.CNhs11191.1311-23C11.53
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.81
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.68
cerebellum, neonate N30.CNhs11135.1395-42I21.68
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A419.77
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F114.32
cortex, adult.CNhs10473.12-14D58.87
cortex, neonate N30.CNhs11107.1392-42F210.48
diencephalon, adult.CNhs10482.20-12F213.30
diencephalon, neonate N30.CNhs11201.1388-42B211.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.05
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D43.32
eyeball, neonate N00.CNhs11207.633-15C62.25
eyeball, neonate N01.CNhs11140.1532-43E72.69
eyeball, neonate N02.CNhs11205.1551-44G80.84
eyeball, neonate N16.CNhs11188.777-19A25.17
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.41
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.98
heart, embryo E16.CNhs11021.457-17C60.93
heart, embryo E17.CNhs11025.479-18E53.26
heart, embryo E18.CNhs11030.1283-20G31.88
heart, neonate N00.CNhs11213.639-21E32.10
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G16.24
heart, neonate N16.CNhs11209.782-15G11.13
heart, neonate N20.CNhs11127.821-26I60.44
heart, neonate N25.CNhs11196.1351-25D31.10
heart, neonate N30.CNhs11202.1390-42D20.54
hippocampus, adult.CNhs10478.13-16E85.47
hippocampus, neonate N00.CNhs11228.627-43G116.05
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C71.55
kidney, neonate N00.CNhs11214.646-21G72.88
kidney, neonate N10.CNhs11206.758-6D50.70
kidney, neonate N20.CNhs11113.832-19I10.74
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.58
liver, neonate N00.CNhs11117.641-24F42.59
liver, neonate N03.CNhs11123.1345-25G20.82
liver, neonate N06.CNhs11101.684-20A828.75
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.87
liver, neonate N20.CNhs11220.823-25A30.51
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.51
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.67
lung, embryo E18.CNhs10583.1287-20I61.19
lung, neonate N00.CNhs11224.640-42C610.34
lung, neonate N06.CNhs11212.683-20E52.68
lung, neonate N07.CNhs11111.715-19A37.09
lung, neonate N10.CNhs11219.750-23E63.99
lung, neonate N20.CNhs11109.822-18A42.29
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.01
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C218.94
medulla oblongata, neonate N30.CNhs11200.1396-42A315.71
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.43
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I93.86
ovary, adult.CNhs10507.91-2I70.14
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.73
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E60.36
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.07
pituitary gland, embryo E17.CNhs11039.1265-44F50.49
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.70
placenta, adult pregnant day17.CNhs10464.577-18G30.85
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.42
skin, neonate N06.CNhs11097.693-20I50.24
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C937.83
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.62
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A91.16
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.52
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.30
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A157.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A231.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A337.81
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D720.45
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A410.96
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A522.66
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A619.58
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.97
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A825.38
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A934.17
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.54
whole body, embryo E14.5.CNhs10578.420-27D22.92
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F21.10
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.25
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.37
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G52.01
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.13
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G53.67
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.80
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G58.23
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G59.76
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G53.10
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.88
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.94
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.21
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.23
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.24
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I52.00
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.50
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.88
whole body, neonate N10.CNhs10518.761-6B40.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)1.91e-1223
neuroblast (sensu Vertebrata)1.91e-1223

Uber anatomy
Ontology termp-valuen
regional part of nervous system3.24e-2254
neural tube2.82e-2052
neural rod2.82e-2052
future spinal cord2.82e-2052
neural keel2.82e-2052
gray matter2.52e-1934
neurectoderm1.25e-1864
neural plate1.25e-1864
presumptive neural plate1.25e-1864
central nervous system1.65e-1773
nervous system1.33e-1675
brain3.30e-1647
future brain3.30e-1647
regional part of brain1.35e-1546
brain grey matter2.12e-1529
regional part of telencephalon2.12e-1529
telencephalon2.12e-1529
ecto-epithelium2.02e-1473
pre-chordal neural plate2.65e-1449
structure with developmental contribution from neural crest2.76e-1492
anterior neural tube3.21e-1440
regional part of forebrain2.07e-1339
forebrain2.07e-1339
future forebrain2.07e-1339
ectoderm-derived structure2.72e-1395
ectoderm2.72e-1395
presumptive ectoderm2.72e-1395
tube3.56e-12114
occipital lobe5.15e-1110
visual cortex5.15e-1110
neocortex5.15e-1110
regional part of cerebral cortex5.90e-1117
anatomical conduit3.26e-10122
cerebral cortex3.29e-0921
cerebral hemisphere3.29e-0921
pallium3.29e-0921
basal ganglion6.31e-088
nuclear complex of neuraxis6.31e-088
aggregate regional part of brain6.31e-088
collection of basal ganglia6.31e-088
cerebral subcortex6.31e-088
posterior neural tube6.65e-0712
chordal neural plate6.65e-0712
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