FFCP PHASE1:Mm9::chr15:80117664..80117682,+: Difference between revisions
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{{FFCP|EntrezGene=239556|HGNC=|MCL_coexpression_id=1|UniProt=E9Q7P2,E0CXK2|association_with_transcript=0bp_to_ENSMUST00000160424,NM_001044308,uc009var.1_5end|description=CAGE_peak_1_at_Cacna1i_5end|id=chr15:80117664..80117682,+|ontology_enrichment_celltype=CL:0000117!3.00e-17!23;CL:0000337!3.00e-17!23;CL:0000540!1.73e-12!33;CL:0000047!1.73e-12!33;CL:0000031!1.73e-12!33;CL:0000404!1.73e-12!33;CL:0000393!2.88e-09!39;CL:0000211!2.88e-09!39;CL:0002319!2.89e-08!43;CL:0000221!6.78e-08!44;CL:0000133!6.78e-08!44|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-17,23;CL:0000337,1.72e-17,23;CL:0000540,4.57e-11,33;CL:0000047,4.57e-11,33;CL:0000031,4.57e-11,33;CL:0000404,4.57e-11,33;CL:0000393,8.15e-09,39;CL:0000211,8.15e-09,39;CL:0002319,1.13e-07,43;CL:0000221,2.02e-07,44;CL:0000133,2.02e-07,44;CL:0002614,8.18e-07,3;CL:0002610,9.40e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!3.58e-30!52;UBERON:0005068!3.58e-30!52;UBERON:0006241!3.58e-30!52;UBERON:0007135!3.58e-30!52;UBERON:0002346!2.15e-29!71;UBERON:0003075!2.15e-29!71;UBERON:0007284!2.15e-29!71;UBERON:0000033!3.90e-29!63;UBERON:0000955!4.13e-29!50;UBERON:0006238!4.13e-29!50;UBERON:0001017!6.16e-29!73;UBERON:0005743!6.16e-29!73;UBERON:0000073!1.43e-28!75;UBERON:0001016!1.43e-28!75;UBERON:0002616!5.51e-28!49;UBERON:0003056!2.19e-26!49;UBERON:0002020!2.38e-25!34;UBERON:0004121!1.57e-23!102;UBERON:0000924!1.57e-23!102;UBERON:0006601!1.57e-23!102;UBERON:0003080!2.49e-23!40;UBERON:0002780!2.29e-22!39;UBERON:0001890!2.29e-22!39;UBERON:0006240!2.29e-22!39;UBERON:0002791!1.90e-21!29;UBERON:0003528!1.90e-21!29;UBERON:0001893!1.90e-21!29;UBERON:0007811!4.00e-17!86;UBERON:0000956!1.20e-14!21;UBERON:0001869!1.20e-14!21;UBERON:0000203!1.20e-14!21;UBERON:0000153!3.55e-14!94;UBERON:0002619!2.86e-12!17;UBERON:0002021!1.47e-11!10;UBERON:0000411!1.47e-11!10;UBERON:0001950!1.47e-11!10;UBERON:0002420!5.18e-08!8;UBERON:0007245!5.18e-08!8;UBERON:0010009!5.18e-08!8;UBERON:0010011!5.18e-08!8;UBERON:0000454!5.18e-08!8;UBERON:0003076!3.12e-07!12;UBERON:0003057!3.12e-07!12|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.11e-48,54;UBERON:0001049,1.03e-44,52;UBERON:0005068,1.03e-44,52;UBERON:0006241,1.03e-44,52;UBERON:0007135,1.03e-44,52;UBERON:0001017,3.34e-40,73;UBERON:0001016,6.80e-39,75;UBERON:0002020,1.34e-38,34;UBERON:0000955,2.40e-37,47;UBERON:0006238,2.40e-37,47;UBERON:0002346,6.49e-37,64;UBERON:0003075,6.49e-37,64;UBERON:0007284,6.49e-37,64;UBERON:0002616,2.52e-35,46;UBERON:0010371,2.61e-31,73;UBERON:0003528,6.67e-31,29;UBERON:0002791,6.67e-31,29;UBERON:0001893,6.67e-31,29;UBERON:0004121,1.62e-30,95;UBERON:0000924,1.62e-30,95;UBERON:0006601,1.62e-30,95;UBERON:0003080,2.10e-30,40;UBERON:0002780,1.16e-28,39;UBERON:0001890,1.16e-28,39;UBERON:0006240,1.16e-28,39;UBERON:0003056,1.47e-25,49;UBERON:0010314,4.48e-23,92;UBERON:0002021,5.31e-22,10;UBERON:0000411,5.31e-22,10;UBERON:0001950,5.31e-22,10;UBERON:0002619,1.28e-19,17;UBERON:0000956,5.92e-18,21;UBERON:0001869,5.92e-18,21;UBERON:0000203,5.92e-18,21;UBERON:0000025,8.34e-16,114;UBERON:0002420,9.49e-15,8;UBERON:0007245,9.49e-15,8;UBERON:0010009,9.49e-15,8;UBERON:0010011,9.49e-15,8;UBERON:0000454,9.49e-15,8;UBERON:0004111,3.25e-14,122;UBERON:0003076,3.51e-14,12;UBERON:0003057,3.51e-14,12;UBERON:0002240,2.06e-10,6;UBERON:0005174,2.06e-10,6;UBERON:0001137,2.06e-10,6;UBERON:0000369,1.60e-09,5;UBERON:0002435,1.60e-09,5;UBERON:0000204,1.60e-09,5;UBERON:0010082,1.60e-09,5;UBERON:0011216,1.79e-09,194;UBERON:0001948,9.23e-09,5;UBERON:0002315,9.23e-09,5;UBERON:0002950,1.09e-08,4;UBERON:0001891,1.09e-08,4;UBERON:0009616,1.09e-08,4;UBERON:0010286,1.09e-08,4;UBERON:0000483,3.68e-08,174;UBERON:0000119,5.69e-08,176;UBERON:0002038,8.18e-07,3;UBERON:0009663,8.18e-07,3;UBERON:0009661,8.18e-07,3;UBERON:0000125,8.18e-07,3;UBERON:0002308,8.18e-07,3;UBERON:0004684,9.40e-07,3;UBERON:0002275,9.40e-07,3|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.420649922702764,1.71390590642282,1.54607978666129,0.61245399607477,0.479227355091182,2.75765635983006,12.1127469099328,5.10749352340751,5.83704826373725,3.29715719325485,3.38504281328916,1.56274011167028,6.70039197603314,8.4414391504752,7.63991238884051,2.06240009831567,2.42031857358475,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66176630138106,7.74952815209784,0,0,0,0,10.7849260371472,15.5550204958333,1.50785222535437,15.9918374576894,18.9229438424445,11.2205544062162,9.89671704713322,0,0,0,0.420883711772948,0.390361328888111,0,0.180062129805349,0.30140963567143,0.272145996605311,0.512454881139399,0.562210347358373,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,1.44066457330998,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,6.91548950893999,0,0,0.315508219416257,0,0.430846795465598,0,0,0.283076530788832,0,0,0,38.237236654195,0,0,0.162886959353576,0,0,0,0.604647113929502,0.754420319023592,0,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,3.40439605753788,0.18006109403131,0.388076051348264,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7195773899168,20.2543104063158,16.6139698897425,28.1839219043648,14.3867329151835,18.1294535373528,17.550585006027,13.0593148935024,13.5942722695261,9.83744592328458,0,0.399024873401031,0.512200817262403,0.243106717068294,0,0,0.666740183404846,0,0.64183841918363,0.758091635291392,0.25347929989024,0.754505365544305,0.749132059759059,0.128050304809739,0.516919220600519,0,0.695305955669133,0.77163688185482,0.412085900803307,0.147198920134397,0,0.354951612318675,0.715308569841963,0.726732083161643,0.282328141245992,0.169229215783353,0,0.789209134313529,0.135804113845862,0,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.771626443924566,1.24905288968973,0.701794825336225,0.644613162144895,0.191288332068843,0,0|short_description=p1@Cacna1i}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:239556 | |||
|HGNC= | |||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:E9Q7P2,uniprot:E0CXK2 | |||
|association_with_transcript=0bp_to_ENSMUST00000160424,NM_001044308,uc009var.1_5end | |||
|cluster_id=chr15:80117664..80117682,+ | |||
|description=CAGE_peak_1_at_Cacna1i_5end | |||
|id=chr15:80117664..80117682,+ | |||
|ontology_enrichment_celltype=CL:0000117!3.00e-17!23;CL:0000337!3.00e-17!23;CL:0000540!1.73e-12!33;CL:0000047!1.73e-12!33;CL:0000031!1.73e-12!33;CL:0000404!1.73e-12!33;CL:0000393!2.88e-09!39;CL:0000211!2.88e-09!39;CL:0002319!2.89e-08!43;CL:0000221!6.78e-08!44;CL:0000133!6.78e-08!44 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.72e-17,23;CL:0000337,1.72e-17,23;CL:0000540,4.57e-11,33;CL:0000047,4.57e-11,33;CL:0000031,4.57e-11,33;CL:0000404,4.57e-11,33;CL:0000393,8.15e-09,39;CL:0000211,8.15e-09,39;CL:0002319,1.13e-07,43;CL:0000221,2.02e-07,44;CL:0000133,2.02e-07,44;CL:0002614,8.18e-07,3;CL:0002610,9.40e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.58e-30!52;UBERON:0005068!3.58e-30!52;UBERON:0006241!3.58e-30!52;UBERON:0007135!3.58e-30!52;UBERON:0002346!2.15e-29!71;UBERON:0003075!2.15e-29!71;UBERON:0007284!2.15e-29!71;UBERON:0000033!3.90e-29!63;UBERON:0000955!4.13e-29!50;UBERON:0006238!4.13e-29!50;UBERON:0001017!6.16e-29!73;UBERON:0005743!6.16e-29!73;UBERON:0000073!1.43e-28!75;UBERON:0001016!1.43e-28!75;UBERON:0002616!5.51e-28!49;UBERON:0003056!2.19e-26!49;UBERON:0002020!2.38e-25!34;UBERON:0004121!1.57e-23!102;UBERON:0000924!1.57e-23!102;UBERON:0006601!1.57e-23!102;UBERON:0003080!2.49e-23!40;UBERON:0002780!2.29e-22!39;UBERON:0001890!2.29e-22!39;UBERON:0006240!2.29e-22!39;UBERON:0002791!1.90e-21!29;UBERON:0003528!1.90e-21!29;UBERON:0001893!1.90e-21!29;UBERON:0007811!4.00e-17!86;UBERON:0000956!1.20e-14!21;UBERON:0001869!1.20e-14!21;UBERON:0000203!1.20e-14!21;UBERON:0000153!3.55e-14!94;UBERON:0002619!2.86e-12!17;UBERON:0002021!1.47e-11!10;UBERON:0000411!1.47e-11!10;UBERON:0001950!1.47e-11!10;UBERON:0002420!5.18e-08!8;UBERON:0007245!5.18e-08!8;UBERON:0010009!5.18e-08!8;UBERON:0010011!5.18e-08!8;UBERON:0000454!5.18e-08!8;UBERON:0003076!3.12e-07!12;UBERON:0003057!3.12e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.11e-48,54;UBERON:0001049,1.03e-44,52;UBERON:0005068,1.03e-44,52;UBERON:0006241,1.03e-44,52;UBERON:0007135,1.03e-44,52;UBERON:0001017,3.34e-40,73;UBERON:0001016,6.80e-39,75;UBERON:0002020,1.34e-38,34;UBERON:0000955,2.40e-37,47;UBERON:0006238,2.40e-37,47;UBERON:0002346,6.49e-37,64;UBERON:0003075,6.49e-37,64;UBERON:0007284,6.49e-37,64;UBERON:0002616,2.52e-35,46;UBERON:0010371,2.61e-31,73;UBERON:0003528,6.67e-31,29;UBERON:0002791,6.67e-31,29;UBERON:0001893,6.67e-31,29;UBERON:0004121,1.62e-30,95;UBERON:0000924,1.62e-30,95;UBERON:0006601,1.62e-30,95;UBERON:0003080,2.10e-30,40;UBERON:0002780,1.16e-28,39;UBERON:0001890,1.16e-28,39;UBERON:0006240,1.16e-28,39;UBERON:0003056,1.47e-25,49;UBERON:0010314,4.48e-23,92;UBERON:0002021,5.31e-22,10;UBERON:0000411,5.31e-22,10;UBERON:0001950,5.31e-22,10;UBERON:0002619,1.28e-19,17;UBERON:0000956,5.92e-18,21;UBERON:0001869,5.92e-18,21;UBERON:0000203,5.92e-18,21;UBERON:0000025,8.34e-16,114;UBERON:0002420,9.49e-15,8;UBERON:0007245,9.49e-15,8;UBERON:0010009,9.49e-15,8;UBERON:0010011,9.49e-15,8;UBERON:0000454,9.49e-15,8;UBERON:0004111,3.25e-14,122;UBERON:0003076,3.51e-14,12;UBERON:0003057,3.51e-14,12;UBERON:0002240,2.06e-10,6;UBERON:0005174,2.06e-10,6;UBERON:0001137,2.06e-10,6;UBERON:0000369,1.60e-09,5;UBERON:0002435,1.60e-09,5;UBERON:0000204,1.60e-09,5;UBERON:0010082,1.60e-09,5;UBERON:0011216,1.79e-09,194;UBERON:0001948,9.23e-09,5;UBERON:0002315,9.23e-09,5;UBERON:0002950,1.09e-08,4;UBERON:0001891,1.09e-08,4;UBERON:0009616,1.09e-08,4;UBERON:0010286,1.09e-08,4;UBERON:0000483,3.68e-08,174;UBERON:0000119,5.69e-08,176;UBERON:0002038,8.18e-07,3;UBERON:0009663,8.18e-07,3;UBERON:0009661,8.18e-07,3;UBERON:0000125,8.18e-07,3;UBERON:0002308,8.18e-07,3;UBERON:0004684,9.40e-07,3;UBERON:0002275,9.40e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72138528483423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.518448061542388,0.540023753326763,0.420649922702764,1.71390590642282,1.54607978666129,0.61245399607477,0.479227355091182,2.75765635983006,12.1127469099328,5.10749352340751,5.83704826373725,3.29715719325485,3.38504281328916,1.56274011167028,6.70039197603314,8.4414391504752,7.63991238884051,2.06240009831567,2.42031857358475,1.1183966749518,0,0.0755715601067855,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,9.66176630138106,7.74952815209784,0,0,0,0,10.7849260371472,15.5550204958333,1.50785222535437,15.9918374576894,18.9229438424445,11.2205544062162,9.89671704713322,0,0,0,0.420883711772948,0.390361328888111,0,0.180062129805349,0.30140963567143,0.272145996605311,0.512454881139399,0.562210347358373,2.06962696591213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.9395683026162,1.44066457330998,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.90367536947505,6.91548950893999,0,0,0.315508219416257,0,0.430846795465598,0,0,0.283076530788832,0,0,0,38.237236654195,0,0,0.162886959353576,0,0,0,0.604647113929502,0.754420319023592,0,0.922305443831782,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,3.40439605753788,0.18006109403131,0.388076051348264,0,0.177340233642274,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,6.67531087237835,0,0,0,0,0,0,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7195773899168,20.2543104063158,16.6139698897425,28.1839219043648,14.3867329151835,18.1294535373528,17.550585006027,13.0593148935024,13.5942722695261,9.83744592328458,0,0.399024873401031,0.512200817262403,0.243106717068294,0,0,0.666740183404846,0,0.64183841918363,0.758091635291392,0.25347929989024,0.754505365544305,0.749132059759059,0.128050304809739,0.516919220600519,0,0.695305955669133,0.77163688185482,0.412085900803307,0.147198920134397,0,0.354951612318675,0.715308569841963,0.726732083161643,0.282328141245992,0.169229215783353,0,0.789209134313529,0.135804113845862,0,0.474540072496697,0.29551344712669,0.409231043169689,0.619747364743864,0.771626443924566,1.24905288968973,0.701794825336225,0.644613162144895,0.191288332068843,0,0 | |||
|short_description=p1@Cacna1i | |||
}} |
Revision as of 16:06, 5 August 2015
Short description: | p1@Cacna1i |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cacna1i_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000160424, NM_001044308, uc009var.1_5end |
EntrezGene: | 239556 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.72e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.72e-17 | 23 |
neuron | 4.57e-11 | 33 |
neuronal stem cell | 4.57e-11 | 33 |
neuroblast | 4.57e-11 | 33 |
electrically signaling cell | 4.57e-11 | 33 |
electrically responsive cell | 8.15e-09 | 39 |
electrically active cell | 8.15e-09 | 39 |
neural cell | 1.13e-07 | 43 |
ectodermal cell | 2.02e-07 | 44 |
neurectodermal cell | 2.02e-07 | 44 |
neuron of the substantia nigra | 8.18e-07 | 3 |
raphe nuclei neuron | 9.40e-07 | 3 |